BLASTX 7.6.2
Query= RU07324 /QuerySize=300
(299 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G35840.1 | Symbols: PHYC | PHYC (phytochrome d... 119 4e-028
TAIR9_protein||AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | PH... 99 5e-022
TAIR9_protein||AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | PH... 99 5e-022
TAIR9_protein||AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | PHYB (PH... 84 1e-017
TAIR9_protein||AT4G16250.1 | Symbols: PHYD | PHYD (PHYTOCHROME D... 83 2e-017
TAIR9_protein||AT4G18130.1 | Symbols: PHYE | PHYE (PHYTOCHROME D... 66 4e-012
>TAIR9_protein||AT5G35840.1 | Symbols: PHYC | PHYC (phytochrome defective c);
protein histidine kinase | chr5:14008049-14011619 FORWARD
Length = 1112
Score = 119 bits (297), Expect = 4e-028
Identities = 56/99 (56%), Positives = 78/99 (78%)
Frame = -2
Query: 298 SANKRSDEEGRITGVLCFIYVASPELQYAMQVQRIAEQAAADSLRKVAYIRQEIKKPLSG 119
SANKR+D EG++TGVLCF+ V SPELQYA+QVQ+I+E A A +L K+AY+R E+K P
Sbjct: 841 SANKRTDIEGKVTGVLCFLQVPSPELQYALQVQQISEHAIACALNKLAYLRHEVKDPEKA 900
Query: 118 IMLMQNLMGSSNLSKEQQQLHKKSTLCREQLTKIVDDTD 2
I +Q+L+ SS LS++Q++L + S LCREQL K++ D+D
Sbjct: 901 ISFLQDLLHSSGLSEDQKRLLRTSVLCREQLAKVISDSD 939
>TAIR9_protein||AT1G09570.1 | Symbols: PHYA, FHY2, FRE1, HY8 | PHYA (PHYTOCHROME
A); G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr1:3095498-3099216
REVERSE
Length = 1123
Score = 99 bits (244), Expect = 5e-022
Identities = 45/97 (46%), Positives = 72/97 (74%)
Frame = -2
Query: 292 NKRSDEEGRITGVLCFIYVASPELQYAMQVQRIAEQAAADSLRKVAYIRQEIKKPLSGIM 113
+K+ D EG +TGV CF+ +AS ELQ A+ VQR+AE+ A L+ +AYI+++I+ PLSGIM
Sbjct: 856 SKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIM 915
Query: 112 LMQNLMGSSNLSKEQQQLHKKSTLCREQLTKIVDDTD 2
+ ++ + L EQ+++ + S LC++QL+KI+DD+D
Sbjct: 916 FTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSD 952
>TAIR9_protein||AT1G09570.2 | Symbols: PHYA, FHY2, FRE1, HY8 | PHYA (PHYTOCHROME
A); G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr1:3095498-3098892
REVERSE
Length = 1015
Score = 99 bits (244), Expect = 5e-022
Identities = 45/97 (46%), Positives = 72/97 (74%)
Frame = -2
Query: 292 NKRSDEEGRITGVLCFIYVASPELQYAMQVQRIAEQAAADSLRKVAYIRQEIKKPLSGIM 113
+K+ D EG +TGV CF+ +AS ELQ A+ VQR+AE+ A L+ +AYI+++I+ PLSGIM
Sbjct: 748 SKKLDREGVVTGVFCFLQLASHELQQALHVQRLAERTAVKRLKALAYIKRQIRNPLSGIM 807
Query: 112 LMQNLMGSSNLSKEQQQLHKKSTLCREQLTKIVDDTD 2
+ ++ + L EQ+++ + S LC++QL+KI+DD+D
Sbjct: 808 FTRKMIEGTELGPEQRRILQTSALCQKQLSKILDDSD 844
>TAIR9_protein||AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | PHYB (PHYTOCHROME B);
G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr2:8140079-8144151
FORWARD
Length = 1173
Score = 84 bits (206), Expect = 1e-017
Identities = 40/99 (40%), Positives = 65/99 (65%)
Frame = -2
Query: 298 SANKRSDEEGRITGVLCFIYVASPELQYAMQVQRIAEQAAADSLRKVAYIRQEIKKPLSG 119
+ANKR EG++ G CF+ + SPELQ A+ VQR + +++AYI Q IK PLSG
Sbjct: 886 TANKRVSLEGKVIGAFCFLQIPSPELQQALAVQRRQDTECFTKAKELAYICQVIKNPLSG 945
Query: 118 IMLMQNLMGSSNLSKEQQQLHKKSTLCREQLTKIVDDTD 2
+ +L+ +++L+++Q+QL + S C +Q+++IV D D
Sbjct: 946 MRFANSLLEATDLNEDQKQLLETSVSCEKQISRIVGDMD 984
>TAIR9_protein||AT4G16250.1 | Symbols: PHYD | PHYD (PHYTOCHROME DEFECTIVE D);
G-protein coupled photoreceptor/ red or far-red light photoreceptor/
signal transducer | chr4:9195602-9199486 REVERSE
Length = 1165
Score = 83 bits (204), Expect = 2e-017
Identities = 41/97 (42%), Positives = 62/97 (63%)
Frame = -2
Query: 292 NKRSDEEGRITGVLCFIYVASPELQYAMQVQRIAEQAAADSLRKVAYIRQEIKKPLSGIM 113
NKR +G+I G CF+ + SPELQ A++VQR E +++AYI Q IK PLSG+
Sbjct: 892 NKRVSIDGKIIGAFCFLQIPSPELQQALEVQRRQESEYFSRRKELAYIFQVIKNPLSGLR 951
Query: 112 LMQNLMGSSNLSKEQQQLHKKSTLCREQLTKIVDDTD 2
+L+ +L+++Q+QL + S C +Q++KIV D D
Sbjct: 952 FTNSLLEDMDLNEDQKQLLETSVSCEKQISKIVGDMD 988
>TAIR9_protein||AT4G18130.1 | Symbols: PHYE | PHYE (PHYTOCHROME DEFECTIVE E);
G-protein coupled photoreceptor/ protein histidine kinase/ signal
transducer | chr4:10042312-10045948 REVERSE
Length = 1113
Score = 66 bits (159), Expect = 4e-012
Identities = 34/99 (34%), Positives = 58/99 (58%), Gaps = 4/99 (4%)
Frame = -2
Query: 298 SANKRSDEEGRITGVLCFIYVASPELQYAMQVQRIAEQAAADSLRKVAYIRQEIKKPLSG 119
+ANK ++ EG++ + CF ++ + + + E +A SL ++ Y+RQEIK PL+G
Sbjct: 833 TANKSTNIEGKV--IRCFFFLQIINKESGLSCPELKE--SAQSLNELTYVRQEIKNPLNG 888
Query: 118 IMLMQNLMGSSNLSKEQQQLHKKSTLCREQLTKIVDDTD 2
I L+ SS +S Q+Q + S C +Q+T I++ TD
Sbjct: 889 IRFAHKLLESSEISASQRQFLETSDACEKQITTIIESTD 927
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,781,210,414
Number of Sequences: 33410
Number of Extensions: 1781210414
Number of Successful Extensions: 102579658
Number of sequences better than 0.0: 0
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