BLASTX 7.6.2
Query= RU07414 /QuerySize=232
(231 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugat... 87 2e-018
TAIR9_protein||AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugat... 87 2e-018
TAIR9_protein||AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11 (UB... 87 2e-018
TAIR9_protein||AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CON... 87 2e-018
TAIR9_protein||AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CON... 87 2e-018
TAIR9_protein||AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-c... 87 2e-018
TAIR9_protein||AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQU... 87 2e-018
TAIR9_protein||AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-c... 87 2e-018
TAIR9_protein||AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQU... 87 2e-018
TAIR9_protein||AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQU... 87 2e-018
TAIR9_protein||AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjug... 87 2e-018
TAIR9_protein||AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQU... 80 2e-016
TAIR9_protein||AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-c... 77 2e-015
TAIR9_protein||AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-c... 73 3e-014
TAIR9_protein||AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-c... 73 3e-014
TAIR9_protein||AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-c... 69 7e-013
TAIR9_protein||AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 ... 55 1e-008
TAIR9_protein||AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 ... 55 1e-008
TAIR9_protein||AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugat... 49 4e-007
TAIR9_protein||AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugat... 49 4e-007
TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-con... 45 8e-006
>TAIR9_protein||AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 149
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 149
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11
(UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase |
chr3:2641487-2642489 FORWARD
Length = 149
Score = 87 bits (214), Expect = 2e-018
Identities = 39/41 (95%), Positives = 41/41 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPP 211
MASKRILKELKDLQKDPP++CSAGPVAEDMFHWQATIMGPP
Sbjct: 1 MASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPP 41
>TAIR9_protein||AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917203 REVERSE
Length = 149
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917293 REVERSE
Length = 179
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 31 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 70
>TAIR9_protein||AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating
enzyme 10); ubiquitin-protein ligase | chr5:21632802-21633989 REVERSE
Length = 149
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN
CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 149
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating
enzyme 10); ubiquitin-protein ligase | chr5:21632802-21633989 REVERSE
Length = 149
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN
CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677021 FORWARD
Length = 146
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN
CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 149
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21633187-21633989 REVERSE
Length = 110
Score = 87 bits (214), Expect = 2e-018
Identities = 40/40 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 40
>TAIR9_protein||AT5G41700.4 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN
CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 150
Score = 80 bits (196), Expect = 2e-016
Identities = 39/41 (95%), Gaps = 1/41 (2%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSC-SAGPVAEDMFHWQATIMGP 208
MASKRILKELKDLQKDPPTSC AGPVAEDMFHWQATIMGP
Sbjct: 1 MASKRILKELKDLQKDPPTSCIFAGPVAEDMFHWQATIMGP 41
>TAIR9_protein||AT2G16740.1 | Symbols: UBC29 | UBC29 (ubiquitin-conjugating
enzyme 29); ubiquitin-protein ligase | chr2:7267880-7268737 FORWARD
Length = 149
Score = 77 bits (188), Expect = 2e-015
Identities = 33/40 (82%), Positives = 37/40 (92%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MA++RILKELK+LQ+DPP SCSAGP EDMFHWQATIMGP
Sbjct: 1 MATRRILKELKELQRDPPVSCSAGPTGEDMFHWQATIMGP 40
>TAIR9_protein||AT5G56150.1 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating
enzyme 30); ubiquitin-protein ligase | chr5:22729756-22730964 FORWARD
Length = 149
Score = 73 bits (177), Expect = 3e-014
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRI KEL+DLQ+DPP SCSAGP +DMF WQATIMGP
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGP 40
>TAIR9_protein||AT5G56150.2 | Symbols: UBC30 | UBC30 (ubiquitin-conjugating
enzyme 30); ubiquitin-protein ligase | chr5:22729756-22730964 FORWARD
Length = 149
Score = 73 bits (177), Expect = 3e-014
Identities = 32/40 (80%), Positives = 35/40 (87%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
MASKRI KEL+DLQ+DPP SCSAGP +DMF WQATIMGP
Sbjct: 1 MASKRINKELRDLQRDPPVSCSAGPTGDDMFQWQATIMGP 40
>TAIR9_protein||AT3G08700.1 | Symbols: UBC12 | UBC12 (ubiquitin-conjugating
enzyme 12); small conjugating protein ligase/ ubiquitin-protein ligase
| chr3:2643482-2644545 FORWARD
Length = 150
Score = 69 bits (166), Expect = 7e-013
Identities = 31/41 (75%), Positives = 37/41 (90%), Gaps = 1/41 (2%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSAGPVA-EDMFHWQATIMGP 208
MASKRI +EL+D+Q+ PP +CSAGPVA ED+FHWQATIMGP
Sbjct: 1 MASKRISRELRDMQRHPPANCSAGPVAEEDIFHWQATIMGP 41
>TAIR9_protein||AT3G13550.1 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA
9); protein binding / ubiquitin-protein ligase | chr3:4423569-4424797
REVERSE
Length = 183
Score = 55 bits (130), Expect = 1e-008
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +2
Query: 74 RRSTSMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
+ S S + KRI +E+ +L DPP CSAGP ++++HW ATI+GP
Sbjct: 31 KTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGP 75
>TAIR9_protein||AT3G13550.2 | Symbols: FUS9, EMB144, COP10, CIN4 | FUS9 (FUSCA
9); protein binding / ubiquitin-protein ligase | chr3:4423828-4424797
REVERSE
Length = 171
Score = 55 bits (130), Expect = 1e-008
Identities = 22/45 (48%), Positives = 32/45 (71%)
Frame = +2
Query: 74 RRSTSMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
+ S S + KRI +E+ +L DPP CSAGP ++++HW ATI+GP
Sbjct: 31 KTSVSASGKRIQREMAELNIDPPPDCSAGPKGDNLYHWIATIIGP 75
>TAIR9_protein||AT1G64230.3 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 158
Score = 49 bits (116), Expect = 4e-007
Identities = 23/23 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSA 157
MASKRILKELKDLQKDPPTSCSA
Sbjct: 1 MASKRILKELKDLQKDPPTSCSA 23
>TAIR9_protein||AT1G64230.4 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 191
Score = 49 bits (116), Expect = 4e-007
Identities = 23/23 (100%)
Frame = +2
Query: 89 MASKRILKELKDLQKDPPTSCSA 157
MASKRILKELKDLQKDPPTSCSA
Sbjct: 1 MASKRILKELKDLQKDPPTSCSA 23
>TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465 FORWARD
Length = 151
Score = 45 bits (105), Expect = 8e-006
Identities = 19/42 (45%), Positives = 25/42 (59%)
Frame = +2
Query: 83 TSMASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGP 208
T+ A KR++ + K LQKDPP S P ++ HW A I GP
Sbjct: 2 TTPAKKRLMWDFKRLQKDPPVGISGAPQDNNIMHWNALIFGP 43
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,810,268,056
Number of Sequences: 33410
Number of Extensions: 1810268056
Number of Successful Extensions: 102779610
Number of sequences better than 0.0: 0
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