BLASTX 7.6.2
Query= RU07823 /QuerySize=304
(303 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G76880.1 | Symbols: | trihelix DNA-binding pr... 165 5e-042
TAIR9_protein||AT1G76890.2 | Symbols: GT2, AT-GT2 | GT2; transcr... 156 3e-039
TAIR9_protein||AT1G33240.1 | Symbols: AT-GTL1, AT-GTL2 | AT-GTL1... 142 6e-035
TAIR9_protein||AT5G47660.1 | Symbols: | DNA-binding protein-rel... 99 5e-022
TAIR9_protein||AT5G28300.1 | Symbols: | trihelix DNA-binding pr... 92 7e-020
TAIR9_protein||AT5G03680.1 | Symbols: PTL | PTL (PETAL LOSS); tr... 59 4e-010
TAIR9_protein||AT5G63420.1 | Symbols: emb2746 | emb2746 (embryo ... 52 4e-008
>TAIR9_protein||AT1G76880.1 | Symbols: | trihelix DNA-binding protein, putative
| chr1:28865594-28867931 FORWARD
Length = 604
Score = 165 bits (417), Expect = 5e-042
Identities = 75/97 (77%), Positives = 85/97 (87%)
Frame = -1
Query: 291 ENNSVLAAVGSSRWPKTEVQALINLRTSLDVKYHEAGPKGSLWEEISAGMRRLGYNRSSK 112
+N + A+ SSRWPK E++ALI LRT+LD KY E GPKG LWEEISAGMRRLG+NR+SK
Sbjct: 396 QNMTPAASASSSRWPKVEIEALIKLRTNLDSKYQENGPKGPLWEEISAGMRRLGFNRNSK 455
Query: 111 RCKEKWENINKYFKKVKESSKTRPEDSKTCPYFHQLE 1
RCKEKWENINKYFKKVKES+K RPEDSKTCPYFHQL+
Sbjct: 456 RCKEKWENINKYFKKVKESNKKRPEDSKTCPYFHQLD 492
Score = 87 bits (213), Expect = 2e-018
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Frame = -1
Query: 264 GSSRWPKTEVQALINLRTSLDVKYHEAGPKGSLWEEISAGMRRLGYNRSSKRCKEKWENI 85
G +RWP+ E AL+ +R+ + + + +A KG LWEE+S M GY R++K+CKEK+EN+
Sbjct: 58 GGNRWPRQETLALLKIRSDMGIAFRDASVKGPLWEEVSRKMAEHGYIRNAKKCKEKFENV 117
Query: 84 NKYFKKVKESSKTRPEDSKTCPYFHQLE 1
KY K+ KE +T + KT +F QLE
Sbjct: 118 YKYHKRTKE-GRTGKSEGKTYRFFDQLE 144
>TAIR9_protein||AT1G76890.2 | Symbols: GT2, AT-GT2 | GT2; transcription factor |
chr1:28873211-28875203 REVERSE
Length = 576
Score = 156 bits (393), Expect = 3e-039
Identities = 74/99 (74%), Positives = 83/99 (83%), Gaps = 1/99 (1%)
Frame = -1
Query: 297 NGENNSVLAAVGSSRWPKTEVQALINLRTSLDVKYHEAGPKGSLWEEISAGMRRLGYNRS 118
N +NN ++ SSRWPKTEV+ALI +R +L+ Y E G KG LWEEISAGMRRLGYNRS
Sbjct: 384 NYDNNHSVSP-SSSRWPKTEVEALIRIRKNLEANYQENGTKGPLWEEISAGMRRLGYNRS 442
Query: 117 SKRCKEKWENINKYFKKVKESSKTRPEDSKTCPYFHQLE 1
+KRCKEKWENINKYFKKVKES+K RP DSKTCPYFHQLE
Sbjct: 443 AKRCKEKWENINKYFKKVKESNKKRPLDSKTCPYFHQLE 481
Score = 89 bits (220), Expect = 3e-019
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Frame = -1
Query: 273 AAVGSSRWPKTEVQALINLRTSLDVKYHEAGPKGSLWEEISAGMRRLGYNRSSKRCKEKW 94
A G +RWP+ E AL+ +R+ +D + ++ K LWEEIS M LGY RSSK+CKEK+
Sbjct: 35 AGSGGNRWPRPETLALLRIRSEMDKAFRDSTLKAPLWEEISRKMMELGYKRSSKKCKEKF 94
Query: 93 ENINKYFKKVKESSKTRPEDSKTCPYFHQLE 1
EN+ KY K+ KE +T + KT +F +LE
Sbjct: 95 ENVYKYHKRTKE-GRTGKSEGKTYRFFEELE 124
>TAIR9_protein||AT1G33240.1 | Symbols: AT-GTL1, AT-GTL2 | AT-GTL1 (GT2-LIKE 1);
DNA binding / transcription factor | chr1:12051859-12054320 REVERSE
Length = 670
Score = 142 bits (356), Expect = 6e-035
Identities = 60/87 (68%), Positives = 76/87 (87%)
Frame = -1
Query: 261 SSRWPKTEVQALINLRTSLDVKYHEAGPKGSLWEEISAGMRRLGYNRSSKRCKEKWENIN 82
SSRWPK E+ ALINLR+ ++ +Y + PKG LWEEIS M+R+GYNR++KRCKEKWENIN
Sbjct: 433 SSRWPKAEILALINLRSGMEPRYQDNVPKGLLWEEISTSMKRMGYNRNAKRCKEKWENIN 492
Query: 81 KYFKKVKESSKTRPEDSKTCPYFHQLE 1
KY+KKVKES+K RP+D+KTCPYFH+L+
Sbjct: 493 KYYKKVKESNKKRPQDAKTCPYFHRLD 519
Score = 86 bits (211), Expect = 4e-018
Identities = 40/98 (40%), Positives = 59/98 (60%), Gaps = 1/98 (1%)
Frame = -1
Query: 294 GENNSVLAAVGSSRWPKTEVQALINLRTSLDVKYHEAGPKGSLWEEISAGMRRLGYNRSS 115
G ++ +RWP+ E AL+ +R+ +D + +A K LWE +S + LGY RSS
Sbjct: 49 GGGGGSASSSSGNRWPREETLALLRIRSDMDSTFRDATLKAPLWEHVSRKLLELGYKRSS 108
Query: 114 KRCKEKWENINKYFKKVKESSKTRPEDSKTCPYFHQLE 1
K+CKEK+EN+ KY+K+ KE+ R D K +F QLE
Sbjct: 109 KKCKEKFENVQKYYKRTKETRGGR-HDGKAYKFFSQLE 145
>TAIR9_protein||AT5G47660.1 | Symbols: | DNA-binding protein-related |
chr5:19313008-19314636 FORWARD
Length = 399
Score = 99 bits (244), Expect = 5e-022
Identities = 49/100 (49%), Positives = 68/100 (68%), Gaps = 8/100 (8%)
Frame = -1
Query: 303 YSNGENNSVLAAVGSSRWPKTEVQALINLRTSLDVKYHEAGPKGSLWEEISAGMRRLGYN 124
YS+G +S RWP+ EVQALI+ R+ DV+ KG++W+EISA M+ GY
Sbjct: 293 YSSGSGSS------GRRWPQEEVQALISSRS--DVEEKTGINKGAIWDEISARMKERGYE 344
Query: 123 RSSKRCKEKWENINKYFKKVKESSKTRPEDSKTCPYFHQL 4
RS+K+CKEKWEN+NKY+++V E + +PE SKT YF +L
Sbjct: 345 RSAKKCKEKWENMNKYYRRVTEGGQKQPEHSKTRSYFEKL 384
>TAIR9_protein||AT5G28300.1 | Symbols: | trihelix DNA-binding protein, putative
| chr5:10292789-10295101 REVERSE
Length = 620
Score = 92 bits (226), Expect = 7e-020
Identities = 39/55 (70%), Positives = 45/55 (81%)
Frame = -1
Query: 168 LWEEISAGMRRLGYNRSSKRCKEKWENINKYFKKVKESSKTRPEDSKTCPYFHQL 4
LWE IS M +GY RS+KRCKEKWENINKYF+K K+ +K RP DS+TCPYFHQL
Sbjct: 498 LWERISKKMLEIGYKRSAKRCKEKWENINKYFRKTKDVNKKRPLDSRTCPYFHQL 552
>TAIR9_protein||AT5G03680.1 | Symbols: PTL | PTL (PETAL LOSS); transcription
factor | chr5:957858-960760 FORWARD
Length = 592
Score = 59 bits (142), Expect = 4e-010
Identities = 37/97 (38%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Frame = -1
Query: 285 NSVLAAVGSSRWPKTEVQALINLRTSLDVKYHEAGPKGS---LWEEISAGMRRLGYN-RS 118
N+V SS W + E+ L+ +RTS+D + E S LWEEI+A + +LG++ RS
Sbjct: 411 NNVCVKGSSSCWGEQEILKLMEIRTSMDSTFQEILGGCSDEFLWEEIAAKLIQLGFDQRS 470
Query: 117 SKRCKEKWENI-NKYFKKVKESSKTRPEDSKTCPYFH 10
+ CKEKWE I N K+ K+ +K R ++S +C ++
Sbjct: 471 ALLCKEKWEWISNGMRKEKKQINKKRKDNSSSCGVYY 507
>TAIR9_protein||AT5G63420.1 | Symbols: emb2746 | emb2746 (embryo defective
2746); DNA binding / catalytic/ hydrolase | chr5:25400515-25405807
FORWARD
Length = 912
Score = 52 bits (124), Expect = 4e-008
Identities = 30/100 (30%), Positives = 48/100 (48%), Gaps = 6/100 (6%)
Frame = -1
Query: 300 SNGENNSVLAAVGSSRWPKTEVQALINLRTSLDVKYHEAGPKGSLWEEISAGMRRLGYNR 121
S+ E S V ++W E++ +I +R L ++ + +LWEEIS+ + G NR
Sbjct: 805 SDSETKSSPKRVRKNKWKPEEIKKVIRMRGELHSRFQVVKGRMALWEEISSNLSAEGINR 864
Query: 120 SSKRCKEKWEN-INKYFKKVKESSKTRPEDSKTCPYFHQL 4
S +CK W + I KY E SK + P+F +
Sbjct: 865 SPGQCKSLWASLIQKY-----EESKADERSKTSWPHFEDM 899
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,869,051,913
Number of Sequences: 33410
Number of Extensions: 1869051913
Number of Successful Extensions: 102944909
Number of sequences better than 0.0: 0
|