BLASTX 7.6.2
Query= RU07862 /QuerySize=305
(304 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G53230.1 | Symbols: | cell division cycle pro... 176 4e-045
TAIR9_protein||AT5G03340.1 | Symbols: | cell division cycle pro... 176 4e-045
TAIR9_protein||AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | C... 168 7e-043
TAIR9_protein||AT1G03000.1 | Symbols: PEX6 | PEX6 (PEROXIN 6); A... 122 5e-029
TAIR9_protein||AT3G01610.1 | Symbols: CDC48C, emb1354 | CDC48C; ... 108 7e-025
TAIR9_protein||AT3G56690.1 | Symbols: CIP111 | CIP111 (CAM INTER... 108 7e-025
TAIR9_protein||AT5G08470.1 | Symbols: PEX1 | PEX1 (peroxisome 1)... 108 9e-025
TAIR9_protein||AT1G06430.1 | Symbols: FTSH8 | FTSH8; ATP-depende... 100 2e-022
TAIR9_protein||AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEG... 100 2e-022
TAIR9_protein||AT2G03670.1 | Symbols: CDC48B | CDC48B; ATP bindi... 94 2e-020
TAIR9_protein||AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH6 (FT... 94 2e-020
TAIR9_protein||AT2G34560.1 | Symbols: | katanin, putative | chr... 93 3e-020
TAIR9_protein||AT2G34560.2 | Symbols: | katanin, putative | chr... 93 3e-020
TAIR9_protein||AT5G58290.1 | Symbols: RPT3 | RPT3 (REGULATORY PA... 91 1e-019
TAIR9_protein||AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | RPT5A (RE... 89 4e-019
TAIR9_protein||AT2G29080.1 | Symbols: ftsh3 | ftsh3 (FtsH protea... 89 6e-019
TAIR9_protein||AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, AT... 88 1e-018
TAIR9_protein||AT1G45000.1 | Symbols: | 26S proteasome regulato... 88 1e-018
TAIR9_protein||AT1G45000.2 | Symbols: | 26S proteasome regulato... 88 1e-018
TAIR9_protein||AT5G43010.1 | Symbols: RPT4A | RPT4A; ATPase | ch... 88 1e-018
TAIR9_protein||AT1G09100.1 | Symbols: RPT5B | RPT5B (26S proteas... 86 3e-018
TAIR9_protein||AT2G27600.1 | Symbols: SKD1, VPS4 | SKD1 (SUPPRES... 85 6e-018
TAIR9_protein||AT5G19990.1 | Symbols: RPT6A, ATSUG1 | RPT6A (REG... 84 1e-017
TAIR9_protein||AT5G20000.1 | Symbols: | 26S proteasome AAA-ATPa... 84 1e-017
TAIR9_protein||AT1G53780.1 | Symbols: | ATP binding / ATPase/ h... 84 2e-017
TAIR9_protein||AT1G50140.1 | Symbols: | ATP binding / ATPase/ n... 84 2e-017
>TAIR9_protein||AT3G53230.1 | Symbols: | cell division cycle protein 48,
putative / CDC48, putative | chr3:19723416-19726489 FORWARD
Length = 816
Score = 176 bits (444), Expect = 4e-045
Identities = 87/98 (88%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP
Sbjct: 516 KGVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 575
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
CVLFFDELDSIATQRGN RVLNQLLTEMD
Sbjct: 576 CVLFFDELDSIATQRGNSVGDAGGAADRVLNQLLTEMD 613
Score = 95 bits (235), Expect = 6e-021
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K +L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A ++AP
Sbjct: 243 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 302
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
++F DE+DSIA +R R+++QLLT MD
Sbjct: 303 SIIFIDEIDSIAPKR---EKTHGEVERRIVSQLLTLMD 337
>TAIR9_protein||AT5G03340.1 | Symbols: | cell division cycle protein 48,
putative / CDC48, putative | chr5:810091-813133 REVERSE
Length = 811
Score = 176 bits (444), Expect = 4e-045
Identities = 86/98 (87%), Positives = 87/98 (88%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQSAP
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 574
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
CVLFFDELDSIATQRGN RVLNQLLTEMD
Sbjct: 575 CVLFFDELDSIATQRGNSAGDAGGAADRVLNQLLTEMD 612
Score = 95 bits (235), Expect = 6e-021
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K +L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A ++AP
Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
++F DE+DSIA +R R+++QLLT MD
Sbjct: 302 SIIFIDEIDSIAPKR---EKTNGEVERRIVSQLLTLMD 336
>TAIR9_protein||AT3G09840.1 | Symbols: CDC48, ATCDC48, CDC48A | CDC48 (CELL
DIVISION CYCLE 48); ATPase/ identical protein binding |
chr3:3019494-3022832 FORWARD
Length = 810
Score = 168 bits (424), Expect = 7e-043
Identities = 85/99 (85%), Positives = 86/99 (86%), Gaps = 1/99 (1%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VLFYGPPGCGKTLLAKAIANECQANFIS+KGPELLTMWFGESEANVREIFDKARQSAP
Sbjct: 515 KGVLFYGPPGCGKTLLAKAIANECQANFISVKGPELLTMWFGESEANVREIFDKARQSAP 574
Query: 189 CVLFFDELDSIATQR-GNXXXXXXXXXXRVLNQLLTEMD 302
CVLFFDELDSIATQR G RVLNQLLTEMD
Sbjct: 575 CVLFFDELDSIATQRGGGSGGDGGGAADRVLNQLLTEMD 613
Score = 95 bits (235), Expect = 6e-021
Identities = 47/98 (47%), Positives = 68/98 (69%), Gaps = 3/98 (3%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K +L YGPPG GKTL+A+A+ANE A F I GPE+++ GESE+N+R+ F++A ++AP
Sbjct: 242 KGILLYGPPGSGKTLIARAVANETGAFFFCINGPEIMSKLAGESESNLRKAFEEAEKNAP 301
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
++F DE+DSIA +R R+++QLLT MD
Sbjct: 302 SIIFIDEIDSIAPKR---EKTNGEVERRIVSQLLTLMD 336
>TAIR9_protein||AT1G03000.1 | Symbols: PEX6 | PEX6 (PEROXIN 6); ATP binding /
ATPase/ nucleoside-triphosphatase/ nucleotide binding |
chr1:688057-692453 REVERSE
Length = 942
Score = 122 bits (305), Expect = 5e-029
Identities = 58/96 (60%), Positives = 72/96 (75%), Gaps = 1/96 (1%)
Frame = +3
Query: 15 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCV 194
VL YGPPG GKTLLAKA+A EC NF+S+KGPEL+ M+ GESE NVR+IF+KAR + PCV
Sbjct: 694 VLLYGPPGTGKTLLAKAVATECSLNFLSVKGPELINMYIGESEKNVRDIFEKARSARPCV 753
Query: 195 LFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
+FFDELDS+A RG RV++Q+L E+D
Sbjct: 754 IFFDELDSLAPARG-ASGDSGGVMDRVVSQMLAEID 788
>TAIR9_protein||AT3G01610.1 | Symbols: CDC48C, emb1354 | CDC48C; ATP binding /
ATPase/ nucleoside-triphosphatase/ nucleotide binding |
chr3:231787-235057 FORWARD
Length = 821
Score = 108 bits (269), Expect = 7e-025
Identities = 53/95 (55%), Positives = 65/95 (68%), Gaps = 3/95 (3%)
Frame = +3
Query: 18 LFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCVL 197
L YGPPGCGKTL+AKA ANE ANF+ IKG ELL + GESE +R +F +AR APCV+
Sbjct: 566 LLYGPPGCGKTLIAKAAANEAGANFMHIKGAELLNKYVGESELAIRTLFQRARTCAPCVI 625
Query: 198 FFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
FFDE+D++ T RG R+LNQ L E+D
Sbjct: 626 FFDEVDALTTSRGK---EGAWVVERLLNQFLVELD 657
Score = 88 bits (217), Expect = 7e-019
Identities = 45/96 (46%), Positives = 62/96 (64%), Gaps = 3/96 (3%)
Frame = +3
Query: 15 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCV 194
+LF+GPPGCGKT LA AIANE F I E+++ G SE N+RE+F KA ++AP +
Sbjct: 270 ILFHGPPGCGKTKLANAIANEAGVPFYKISATEVISGVSGASEENIRELFSKAYRTAPSI 329
Query: 195 LFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
+F DE+D+I ++R N R++ QLLT MD
Sbjct: 330 VFIDEIDAIGSKREN---QQREMEKRIVTQLLTCMD 362
>TAIR9_protein||AT3G56690.1 | Symbols: CIP111 | CIP111 (CAM INTERACTING PROTEIN
111); ATPase/ calmodulin binding | chr3:20993869-20998531 REVERSE
Length = 1023
Score = 108 bits (269), Expect = 7e-025
Identities = 49/96 (51%), Positives = 70/96 (72%), Gaps = 1/96 (1%)
Frame = +3
Query: 15 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCV 194
+L +GPPGC KTL+A+A+A+E + NF+++KGPEL + W GESE VR +F KAR +AP +
Sbjct: 761 ILMFGPPGCSKTLMARAVASEAKLNFLAVKGPELFSKWVGESEKAVRSLFAKARANAPSI 820
Query: 195 LFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
+FFDE+DS+A+ RG RV++QLL E+D
Sbjct: 821 IFFDEIDSLASIRGK-ENDGVSVSDRVMSQLLVELD 855
>TAIR9_protein||AT5G08470.1 | Symbols: PEX1 | PEX1 (peroxisome 1); ATP binding /
ATPase/ binding / nucleoside-triphosphatase/ nucleotide binding /
protein binding | chr5:2735925-2742731 FORWARD
Length = 1131
Score = 108 bits (268), Expect = 9e-025
Identities = 54/96 (56%), Positives = 64/96 (66%), Gaps = 3/96 (3%)
Frame = +3
Query: 15 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCV 194
VL YGPPGCGKT + A A C FIS+KGPELL + G SE VR+IF KA +APC+
Sbjct: 881 VLLYGPPGCGKTHIVGAAAAACSLRFISVKGPELLNKYIGASEQAVRDIFSKAAAAAPCI 940
Query: 195 LFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
LFFDE DSIA +RG+ RV+NQ LTE+D
Sbjct: 941 LFFDEFDSIAPKRGH---DNTGVTDRVVNQFLTELD 973
>TAIR9_protein||AT1G06430.1 | Symbols: FTSH8 | FTSH8; ATP-dependent peptidase/
ATPase/ metallopeptidase/ zinc ion binding | chr1:1960214-1962525
REVERSE
Length = 686
Score = 100 bits (247), Expect = 2e-022
Identities = 49/98 (50%), Positives = 63/98 (64%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL GPPG GKTLLAKAIA E F SI G E + M+ G + VR++F KA+++AP
Sbjct: 254 KGVLLVGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 313
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C++F DE+D++ QRG + LNQLLTEMD
Sbjct: 314 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMD 351
>TAIR9_protein||AT2G30950.1 | Symbols: VAR2, FTSH2 | VAR2 (VARIEGATED 2);
ATP-dependent peptidase/ ATPase/ metallopeptidase/ zinc ion binding |
chr2:13174692-13177064 FORWARD
Length = 696
Score = 100 bits (247), Expect = 2e-022
Identities = 49/98 (50%), Positives = 63/98 (64%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL GPPG GKTLLAKAIA E F SI G E + M+ G + VR++F KA+++AP
Sbjct: 261 KGVLLIGPPGTGKTLLAKAIAGEAGVPFFSISGSEFVEMFVGVGASRVRDLFKKAKENAP 320
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C++F DE+D++ QRG + LNQLLTEMD
Sbjct: 321 CIVFVDEIDAVGRQRGTGIGGGNDEREQTLNQLLTEMD 358
>TAIR9_protein||AT2G03670.1 | Symbols: CDC48B | CDC48B; ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding | chr2:1117595-1120361
FORWARD
Length = 604
Score = 94 bits (231), Expect = 2e-020
Identities = 46/100 (46%), Positives = 65/100 (65%), Gaps = 1/100 (1%)
Frame = +3
Query: 6 LKVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSA 185
++ +L +GPPGC KT LAKA AN QA+F S+ EL +M+ GE EA +R F +AR ++
Sbjct: 320 MRGILLHGPPGCSKTTLAKAAANAAQASFFSLSCAELFSMYVGEGEALLRNTFQRARLAS 379
Query: 186 PCVLFFDELDSIATQRGN-XXXXXXXXXXRVLNQLLTEMD 302
P ++FFDE D +A +RG+ R+L+ LLTEMD
Sbjct: 380 PSIIFFDEADVVACKRGDESSSNSSTVGERLLSTLLTEMD 419
>TAIR9_protein||AT5G15250.1 | Symbols: FTSH6, ATFTSH6 | FTSH6 (FTSH PROTEASE 6);
ATP-dependent peptidase/ ATPase/ metallopeptidase/ peptidase/ zinc ion
binding | chr5:4950411-4952777 REVERSE
Length = 689
Score = 94 bits (231), Expect = 2e-020
Identities = 44/98 (44%), Positives = 61/98 (62%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL GPPG GKTLLAKAIA E F S+ G E + M+ G + R++F+KA+ ++P
Sbjct: 258 KGVLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSP 317
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C++F DE+D++ RG + LNQ+LTEMD
Sbjct: 318 CIVFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMD 355
>TAIR9_protein||AT2G34560.1 | Symbols: | katanin, putative |
chr2:14560266-14562695 FORWARD
Length = 385
Score = 93 bits (229), Expect = 3e-020
Identities = 42/98 (42%), Positives = 60/98 (61%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K +L +GPPG GKT+LAKA+A EC F +I +++ W G+SE +R +FD AR AP
Sbjct: 137 KGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAP 196
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
+F DE+D+I +QRG R+ +LL +MD
Sbjct: 197 STIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMD 234
>TAIR9_protein||AT2G34560.2 | Symbols: | katanin, putative |
chr2:14560266-14562695 FORWARD
Length = 394
Score = 93 bits (229), Expect = 3e-020
Identities = 42/98 (42%), Positives = 60/98 (61%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K +L +GPPG GKT+LAKA+A EC F +I +++ W G+SE +R +FD AR AP
Sbjct: 146 KGILLFGPPGTGKTMLAKAVATECNTTFFNISASSVVSKWRGDSEKLIRVLFDLARHHAP 205
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
+F DE+D+I +QRG R+ +LL +MD
Sbjct: 206 STIFLDEIDAIISQRGGEGRSEHEASRRLKTELLIQMD 243
>TAIR9_protein||AT5G58290.1 | Symbols: RPT3 | RPT3 (REGULATORY PARTICLE TRIPLE-A
ATPASE 3); ATPase | chr5:23569155-23571116 FORWARD
Length = 409
Score = 91 bits (223), Expect = 1e-019
Identities = 43/96 (44%), Positives = 61/96 (63%)
Frame = +3
Query: 15 VLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAPCV 194
VL YGPPG GKT+LAKA+AN A FI + G E + + GE VR++F A+++AP +
Sbjct: 192 VLLYGPPGTGKTMLAKAVANHTTAAFIRVVGSEFVQKYLGEGPRMVRDVFRLAKENAPAI 251
Query: 195 LFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
+F DE+D+IAT R + R+L +LL +MD
Sbjct: 252 IFIDEVDAIATARFDAQTGADREVQRILMELLNQMD 287
>TAIR9_protein||AT3G05530.1 | Symbols: RPT5A, ATS6A.2 | RPT5A (REGULATORY
PARTICLE TRIPLE-A ATPASE 5A); ATPase/ calmodulin binding |
chr3:1603540-1605993 FORWARD
Length = 425
Score = 89 bits (219), Expect = 4e-019
Identities = 40/98 (40%), Positives = 62/98 (63%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL YGPPG GKTL+A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ AP
Sbjct: 206 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFQLAKEKAP 265
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C++F DE+D+I T+R + R + +LL ++D
Sbjct: 266 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLD 303
>TAIR9_protein||AT2G29080.1 | Symbols: ftsh3 | ftsh3 (FtsH protease 3);
ATP-dependent peptidase/ ATPase | chr2:12489911-12492999 REVERSE
Length = 810
Score = 89 bits (218), Expect = 6e-019
Identities = 45/98 (45%), Positives = 57/98 (58%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K L GPPG GKTLLAKA A E F+SI G + + M+ G + VR +F +ARQ+AP
Sbjct: 356 KGALLVGPPGTGKTLLAKATAGESGVPFLSISGSDFMEMFVGVGPSRVRHLFQEARQAAP 415
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
++F DE+D+I RG LNQLL EMD
Sbjct: 416 SIIFIDEIDAIGRARGRGGLGGNDERESTLNQLLVEMD 453
>TAIR9_protein||AT1G80350.1 | Symbols: ERH3, AAA1, FRA2, LUE1, ATKTN1, KTN1,
FRC2, BOT1, FTR | ERH3 (ECTOPIC ROOT HAIR 3); ATP binding /
nucleoside-triphosphatase/ nucleotide binding | chr1:30205499-30208050
REVERSE
Length = 524
Score = 88 bits (216), Expect = 1e-018
Identities = 45/98 (45%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL +GPPG GKTLLAKA+A EC F ++ L + W GESE VR +FD AR AP
Sbjct: 273 KGVLMFGPPGTGKTLLAKAVATECGTTFFNVSSATLASKWRGESERMVRCLFDLARAYAP 332
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
+F DE+DS+ RG RV ++LL ++D
Sbjct: 333 STIFIDEIDSLCNSRGG--SGEHESSRRVKSELLVQVD 368
>TAIR9_protein||AT1G45000.1 | Symbols: | 26S proteasome regulatory complex
subunit p42D, putative | chr1:17009220-17011607 FORWARD
Length = 400
Score = 88 bits (216), Expect = 1e-018
Identities = 41/98 (41%), Positives = 61/98 (62%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL YGPPG GKTLLA+AIA+ ANF+ + ++ + GES +RE+F+ AR+ P
Sbjct: 174 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQP 233
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C++F DE+D+I +R + R L +LL ++D
Sbjct: 234 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLD 271
>TAIR9_protein||AT1G45000.2 | Symbols: | 26S proteasome regulatory complex
subunit p42D, putative | chr1:17009220-17011607 FORWARD
Length = 336
Score = 88 bits (216), Expect = 1e-018
Identities = 41/98 (41%), Positives = 61/98 (62%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL YGPPG GKTLLA+AIA+ ANF+ + ++ + GES +RE+F+ AR+ P
Sbjct: 174 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQP 233
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C++F DE+D+I +R + R L +LL ++D
Sbjct: 234 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLD 271
>TAIR9_protein||AT5G43010.1 | Symbols: RPT4A | RPT4A; ATPase |
chr5:17248563-17251014 REVERSE
Length = 400
Score = 88 bits (216), Expect = 1e-018
Identities = 41/98 (41%), Positives = 61/98 (62%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL YGPPG GKTLLA+AIA+ ANF+ + ++ + GES +RE+F+ AR+ P
Sbjct: 174 KGVLLYGPPGTGKTLLARAIASNIDANFLKVVSSAIIDKYIGESARLIREMFNYAREHQP 233
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C++F DE+D+I +R + R L +LL ++D
Sbjct: 234 CIIFMDEIDAIGGRRFSEGTSADREIQRTLMELLNQLD 271
>TAIR9_protein||AT1G09100.1 | Symbols: RPT5B | RPT5B (26S proteasome AAA-ATPase
subunit RPT5B); ATPase/ calmodulin binding | chr1:2936675-2939258
REVERSE
Length = 424
Score = 86 bits (212), Expect = 3e-018
Identities = 39/98 (39%), Positives = 62/98 (63%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL YGPPG GKTL+A+A A + A F+ + GP+L+ M+ G+ VR+ F A++ +P
Sbjct: 205 KGVLLYGPPGTGKTLMARACAAQTNATFLKLAGPQLVQMFIGDGAKLVRDAFLLAKEKSP 264
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C++F DE+D+I T+R + R + +LL ++D
Sbjct: 265 CIIFIDEIDAIGTKRFDSEVSGDREVQRTMLELLNQLD 302
>TAIR9_protein||AT2G27600.1 | Symbols: SKD1, VPS4 | SKD1 (SUPPRESSOR OF K+
TRANSPORT GROWTH DEFECT1); ATP binding / nucleoside-triphosphatase/
nucleotide binding | chr2:11781226-11783730 FORWARD
Length = 436
Score = 85 bits (209), Expect = 6e-018
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 2/97 (2%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
+ L YGPPG GK+ LAKA+A E + F S+ +L++ W GESE V +F+ AR+SAP
Sbjct: 166 RAFLLYGPPGTGKSYLAKAVATEADSTFFSVSSSDLVSKWMGESEKLVSNLFEMARESAP 225
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEM 299
++F DE+DS+ RG R+ +LL +M
Sbjct: 226 SIIFVDEIDSLCGTRGE--GNESEASRRIKTELLVQM 260
>TAIR9_protein||AT5G19990.1 | Symbols: RPT6A, ATSUG1 | RPT6A (REGULATORY
PARTICLE TRIPLE-A ATPASE 6A); ATPase | chr5:6752144-6754918 FORWARD
Length = 420
Score = 84 bits (207), Expect = 1e-017
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
Query: 189 CVLFFDELDSIATQR-----GNXXXXXXXXXXRVLNQL 287
++F DE+DSI + R GN +LNQL
Sbjct: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQL 293
>TAIR9_protein||AT5G20000.1 | Symbols: | 26S proteasome AAA-ATPase subunit,
putative | chr5:6756915-6759550 FORWARD
Length = 420
Score = 84 bits (207), Expect = 1e-017
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 5/98 (5%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL YGPPG GKTLLA+A+A+ FI + G EL+ + GE VRE+F AR+ AP
Sbjct: 196 KGVLLYGPPGTGKTLLARAVAHHTDCTFIRVSGSELVQKYIGEGSRMVRELFVMAREHAP 255
Query: 189 CVLFFDELDSIATQR-----GNXXXXXXXXXXRVLNQL 287
++F DE+DSI + R GN +LNQL
Sbjct: 256 SIIFMDEIDSIGSARMESGSGNGDSEVQRTMLELLNQL 293
>TAIR9_protein||AT1G53780.1 | Symbols: | ATP binding / ATPase/ hydrolase/
nucleoside-triphosphatase/ nucleotide binding / peptidyl-prolyl
cis-trans isomerase | chr1:20074212-20077235 REVERSE
Length = 599
Score = 84 bits (205), Expect = 2e-017
Identities = 42/98 (42%), Positives = 58/98 (59%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K VL YGPPG GKTL+A+A+AN A FI + G EL+ + GE VRE+F AR
Sbjct: 374 KGVLCYGPPGSGKTLVARAVANRTGACFIRVVGSELVQKYIGEGARMVRELFQMARSKKA 433
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
C+LFFDE+D+I R + R + ++L ++D
Sbjct: 434 CILFFDEIDAIGGARFDDGVGSDNEVQRTMLEILYQLD 471
>TAIR9_protein||AT1G50140.1 | Symbols: | ATP binding / ATPase/
nucleoside-triphosphatase/ nucleotide binding | chr1:18569921-18578663
REVERSE
Length = 1004
Score = 84 bits (205), Expect = 2e-017
Identities = 42/98 (42%), Positives = 58/98 (59%), Gaps = 2/98 (2%)
Frame = +3
Query: 9 KVVLFYGPPGCGKTLLAKAIANECQANFISIKGPELLTMWFGESEANVREIFDKARQSAP 188
K +L +GPPG GKTLLAKA+A E ANFISI G L + WFG++E + +F A + AP
Sbjct: 750 KGILLFGPPGTGKTLLAKALATEAGANFISITGSTLTSKWFGDAEKLTKALFSFATKLAP 809
Query: 189 CVLFFDELDSIATQRGNXXXXXXXXXXRVLNQLLTEMD 302
++F DE+DS+ RG R+ N+ + D
Sbjct: 810 VIIFVDEIDSLLGARGG--SSEHEATRRMRNEFMAAWD 845
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,869,051,913
Number of Sequences: 33410
Number of Extensions: 1869051913
Number of Successful Extensions: 102944909
Number of sequences better than 0.0: 0
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