BLASTX 7.6.2
Query= RU07907 /QuerySize=542
(541 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G14500.1 | Symbols: | FUNCTIONS IN: molecular... 173 1e-043
TAIR9_protein||AT4G14500.2 | Symbols: | FUNCTIONS IN: molecular... 173 1e-043
TAIR9_protein||AT3G23080.1 | Symbols: | FUNCTIONS IN: molecular... 141 3e-034
TAIR9_protein||AT3G23080.2 | Symbols: | FUNCTIONS IN: molecular... 98 3e-021
>TAIR9_protein||AT4G14500.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G23080.1); Has 257 Blast
hits to 256 proteins in 63 species: Archae - 0; Bacteria - 0; Metazoa -
167; Fungi - 0; Plants - 83; Viruses - 0; Other Eukaryotes - 7 (source:
NCBI BLink). | chr4:8334391-8337022 FORWARD
Length = 434
Score = 173 bits (436), Expect = 1e-043
Identities = 78/96 (81%), Positives = 86/96 (89%), Gaps = 1/96 (1%)
Frame = -1
Query: 346 MEEAVLDLVEFFTNPTITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLIFLGLRSK 167
M+E DL+ FF NP+ TETFVDILLCAVPIWLAVMIGL+IGWSWRPRWTGLI+LG RSK
Sbjct: 1 MDETYFDLLNFFKNPSFTETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLIYLGFRSK 60
Query: 166 FRSFVWTAPPGFGARRLWLAFTAFSAFSICRTIWSK 59
R F+WTAPPGFGARRLWLAFTA SAFS+CRTIWS+
Sbjct: 61 LR-FLWTAPPGFGARRLWLAFTALSAFSVCRTIWSR 95
>TAIR9_protein||AT4G14500.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; CONTAINS InterPro DOMAIN/s:
Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis thaliana
protein match is: unknown protein (TAIR:AT3G23080.1). |
chr4:8334391-8336468 FORWARD
Length = 295
Score = 173 bits (436), Expect = 1e-043
Identities = 78/96 (81%), Positives = 86/96 (89%), Gaps = 1/96 (1%)
Frame = -1
Query: 346 MEEAVLDLVEFFTNPTITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLIFLGLRSK 167
M+E DL+ FF NP+ TETFVDILLCAVPIWLAVMIGL+IGWSWRPRWTGLI+LG RSK
Sbjct: 1 MDETYFDLLNFFKNPSFTETFVDILLCAVPIWLAVMIGLLIGWSWRPRWTGLIYLGFRSK 60
Query: 166 FRSFVWTAPPGFGARRLWLAFTAFSAFSICRTIWSK 59
R F+WTAPPGFGARRLWLAFTA SAFS+CRTIWS+
Sbjct: 61 LR-FLWTAPPGFGARRLWLAFTALSAFSVCRTIWSR 95
>TAIR9_protein||AT3G23080.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; EXPRESSED IN: 23
plant structures; EXPRESSED DURING: 13 growth stages; CONTAINS InterPro
DOMAIN/s: Lipid-binding START (InterPro:IPR002913); BEST Arabidopsis
thaliana protein match is: unknown protein (TAIR:AT4G14500.1); Has 247
Blast hits to 246 proteins in 61 species: Archae - 0; Bacteria - 0;
Metazoa - 162; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes -
3 (source: NCBI BLink). | chr3:8207612-8209181 REVERSE
Length = 420
Score = 141 bits (354), Expect = 3e-034
Identities = 61/84 (72%), Positives = 73/84 (86%), Gaps = 1/84 (1%)
Frame = -1
Query: 322 VEFFTNPTITETFVDILLCAVPIWLAVMIGLVIGWSWRPRWTGLIFLGLRSKFRSFVWTA 143
++FF P++TETFVD+LLCAVPIW+ VMIGL+IGWSWRPRWT L++LG RSK R F+ T
Sbjct: 5 MDFFNKPSVTETFVDVLLCAVPIWVTVMIGLLIGWSWRPRWTSLVYLGFRSKLR-FLCTV 63
Query: 142 PPGFGARRLWLAFTAFSAFSICRT 71
PPGFGARR+WLAFTA SAFS+C T
Sbjct: 64 PPGFGARRIWLAFTALSAFSVCST 87
>TAIR9_protein||AT3G23080.2 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
mitochondrion; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13
growth stages; CONTAINS InterPro DOMAIN/s: Lipid-binding START
(InterPro:IPR002913); BEST Arabidopsis thaliana protein match is:
unknown protein (TAIR:AT4G14500.1); Has 247 Blast hits to 246 proteins
in 61 species: Archae - 0; Bacteria - 0; Metazoa - 162; Fungi - 0;
Plants - 82; Viruses - 0; Other Eukaryotes - 3 (source: NCBI BLink). |
chr3:8207612-8209088 REVERSE
Length = 389
Score = 98 bits (242), Expect = 3e-021
Identities = 43/57 (75%), Positives = 49/57 (85%), Gaps = 1/57 (1%)
Frame = -1
Query: 241 MIGLVIGWSWRPRWTGLIFLGLRSKFRSFVWTAPPGFGARRLWLAFTAFSAFSICRT 71
MIGL+IGWSWRPRWT L++LG RSK R F+ T PPGFGARR+WLAFTA SAFS+C T
Sbjct: 1 MIGLLIGWSWRPRWTSLVYLGFRSKLR-FLCTVPPGFGARRIWLAFTALSAFSVCST 56
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,869,051,913
Number of Sequences: 33410
Number of Extensions: 1869051913
Number of Successful Extensions: 102944909
Number of sequences better than 0.0: 0
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