BLASTX 7.6.2
Query= RU08119 /QuerySize=416
(415 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | PHYB (PH... 146 8e-036
TAIR9_protein||AT4G16250.1 | Symbols: PHYD | PHYD (PHYTOCHROME D... 129 7e-031
TAIR9_protein||AT4G18130.1 | Symbols: PHYE | PHYE (PHYTOCHROME D... 87 4e-018
TAIR9_protein||AT5G35840.1 | Symbols: PHYC | PHYC (phytochrome d... 59 1e-009
>TAIR9_protein||AT2G18790.1 | Symbols: PHYB, HY3, OOP1 | PHYB (PHYTOCHROME B);
G-protein coupled photoreceptor/ protein histidine kinase/ red or
far-red light photoreceptor/ signal transducer | chr2:8140079-8144151
FORWARD
Length = 1173
Score = 146 bits (366), Expect = 8e-036
Identities = 68/98 (69%), Positives = 80/98 (81%), Gaps = 1/98 (1%)
Frame = +2
Query: 2 RYAPSEEGWVEIHVRPILTTIPDGHSMVHTEFRLVCPGEGLPPQLVQDMFHSCRWMTQEG 181
RYAPS+E WVEIH+ + + DG + + TEFR+ CPGEGLPP+LV+DMFHS RW + EG
Sbjct: 1057 RYAPSQE-WVEIHLSQLSKQMADGFAAIRTEFRMACPGEGLPPELVRDMFHSSRWTSPEG 1115
Query: 182 LGLSMCRKILKLMKGEVQYIRESERCYFLVILELATPR 295
LGLS+CRKILKLM GEVQYIRESER YFL+ILEL PR
Sbjct: 1116 LGLSVCRKILKLMNGEVQYIRESERSYFLIILELPVPR 1153
>TAIR9_protein||AT4G16250.1 | Symbols: PHYD | PHYD (PHYTOCHROME DEFECTIVE D);
G-protein coupled photoreceptor/ red or far-red light photoreceptor/
signal transducer | chr4:9195602-9199486 REVERSE
Length = 1165
Score = 129 bits (323), Expect = 7e-031
Identities = 62/97 (63%), Positives = 73/97 (75%), Gaps = 1/97 (1%)
Frame = +2
Query: 2 RYAPSEEGWVEIHVRPILTTIPDGHSMVHTEFRLVCPGEGLPPQLVQDMFHSCRWMTQEG 181
RYAP EG VE+H+ P L + DG S V EFR+ C GEG+PP+ VQDMFHS RW + EG
Sbjct: 1061 RYAPM-EGSVELHLCPTLNQMADGFSAVRLEFRMACAGEGVPPEKVQDMFHSSRWTSPEG 1119
Query: 182 LGLSMCRKILKLMKGEVQYIRESERCYFLVILELATP 292
LGLS+CRKILKLM G VQYIRE ER YFL+++EL P
Sbjct: 1120 LGLSVCRKILKLMNGGVQYIREFERSYFLIVIELPVP 1156
>TAIR9_protein||AT4G18130.1 | Symbols: PHYE | PHYE (PHYTOCHROME DEFECTIVE E);
G-protein coupled photoreceptor/ protein histidine kinase/ signal
transducer | chr4:10042312-10045948 REVERSE
Length = 1113
Score = 87 bits (213), Expect = 4e-018
Identities = 40/96 (41%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Frame = +2
Query: 5 YAPSEEGWVEIHVRPILTTIPDGHSMVHTEFRLVCPGEGLPPQLVQDMFHS-CRWMTQEG 181
+AP WV I + P D +H +FR++ PG+GLP +++ DMF + W+T +G
Sbjct: 1001 HAPFPNSWVGISISPGQELSRDNGRYIHLQFRMIHPGKGLPSEMLSDMFETRDGWVTPDG 1060
Query: 182 LGLSMCRKILKLMKGEVQYIRESERCYFLVILELAT 289
LGL + RK+L+ M G V Y+RE ERC+F V L++ T
Sbjct: 1061 LGLKLSRKLLEQMNGRVSYVREDERCFFQVDLQVKT 1096
>TAIR9_protein||AT5G35840.1 | Symbols: PHYC | PHYC (phytochrome defective c);
protein histidine kinase | chr5:14008049-14011619 FORWARD
Length = 1112
Score = 59 bits (140), Expect = 1e-009
Identities = 31/68 (45%), Positives = 47/68 (69%), Gaps = 2/68 (2%)
Frame = +2
Query: 83 VHTEFRLVCPGEGLPPQLVQDMFHSCRWMT-QEGLGLSMCRKILKLM-KGEVQYIRESER 256
V EFR++ P GLP LV++MF R T +EGLGL + +K++KLM +G ++Y+RESE
Sbjct: 1040 VELEFRIIHPAPGLPEDLVREMFQPLRKGTSREGLGLHITQKLVKLMERGTLRYLRESEM 1099
Query: 257 CYFLVILE 280
F+++ E
Sbjct: 1100 SAFVILTE 1107
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,898,391,618
Number of Sequences: 33410
Number of Extensions: 1898391618
Number of Successful Extensions: 102986645
Number of sequences better than 0.0: 0
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