BLASTX 7.6.2
Query= RU08333 /QuerySize=259
(258 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 87 2e-018
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 84 1e-017
TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); ... 82 6e-017
TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE... 82 7e-017
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 72 7e-014
TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transc... 50 3e-007
TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW... 49 4e-007
TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription... 49 7e-007
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 87 bits (213), Expect = 2e-018
Identities = 40/55 (72%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Frame = -3
Query: 250 AGFSPLHLGSNAFKQASMLLTLFS-AEGYRVEEKEGCLTLGWHSRPLIAASAWQV 89
AGF+ H+GSNAFKQASMLL LF+ EGYRVEE +GCL LGWH+RPLIA SAW++
Sbjct: 476 AGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIATSAWKL 530
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 84 bits (206), Expect = 1e-017
Identities = 38/55 (69%), Positives = 46/55 (83%), Gaps = 1/55 (1%)
Frame = -3
Query: 250 AGFSPLHLGSNAFKQASMLLTLF-SAEGYRVEEKEGCLTLGWHSRPLIAASAWQV 89
+G +P HLGSNAFKQASMLL++F S +GYRVEE GCL LGWH+RPLI SAW++
Sbjct: 528 SGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLITTSAWKL 582
>TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 548
Score = 82 bits (201), Expect = 6e-017
Identities = 36/55 (65%), Positives = 47/55 (85%), Gaps = 1/55 (1%)
Frame = -3
Query: 250 AGFSPLHLGSNAFKQASMLLTLF-SAEGYRVEEKEGCLTLGWHSRPLIAASAWQV 89
AGF P+HLGS+AFKQASMLL+L+ + +GYRVEE +GCL +GW +RPLI SAW++
Sbjct: 492 AGFDPIHLGSSAFKQASMLLSLYATGDGYRVEENDGCLMIGWQTRPLITTSAWKL 546
>TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1);
transcription factor | chr1:24748327-24749862 FORWARD
Length = 512
Score = 82 bits (200), Expect = 7e-017
Identities = 37/56 (66%), Positives = 46/56 (82%), Gaps = 1/56 (1%)
Frame = -3
Query: 253 LAGFSPLHLGSNAFKQASMLLTLFS-AEGYRVEEKEGCLTLGWHSRPLIAASAWQV 89
L GF P+ +GSNA+KQASMLL L++ A+GY VEE EGCL LGW +RPLIA SAW++
Sbjct: 452 LGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIATSAWRI 507
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 72 bits (174), Expect = 7e-014
Identities = 34/55 (61%), Positives = 44/55 (80%), Gaps = 1/55 (1%)
Frame = -3
Query: 250 AGFSPLHLGSNAFKQASMLLTLF-SAEGYRVEEKEGCLTLGWHSRPLIAASAWQV 89
AGF P++LGS+AFKQAS+LL L +GYRVEE +G L L W ++PLIAASAW++
Sbjct: 463 AGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAASAWKL 517
>TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor
| chr1:18678177-18679625 REVERSE
Length = 483
Score = 50 bits (117), Expect = 3e-007
Identities = 23/55 (41%), Positives = 32/55 (58%)
Frame = -3
Query: 256 ELAGFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTLGWHSRPLIAASAWQ 92
+LAGF + L A QA LL +GYR++E+ GC + W RPL + SAW+
Sbjct: 425 DLAGFGNVPLSYYAMLQARRLLQGCGFDGYRIKEESGCAVICWQDRPLYSVSAWR 479
>TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein
binding / protein homodimerization/ sequence-specific DNA binding /
transcription factor | chr3:20070550-20072625 FORWARD
Length = 654
Score = 49 bits (116), Expect = 4e-007
Identities = 22/51 (43%), Positives = 31/51 (60%)
Frame = -3
Query: 247 GFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTLGWHSRPLIAASAW 95
GF + L NA QA++LL +F ++GY + + G L LGW L+ ASAW
Sbjct: 599 GFKGISLAGNAATQATLLLGMFPSDGYTLVDDNGTLKLGWKDLSLLTASAW 649
>TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription factor family
protein | chr5:16779982-16781199 FORWARD
Length = 406
Score = 49 bits (114), Expect = 7e-007
Identities = 23/55 (41%), Positives = 30/55 (54%)
Frame = -3
Query: 247 GFSPLHLGSNAFKQASMLLTLFSAEGYRVEEKEGCLTLGWHSRPLIAASAWQVMP 83
GF P+ L N QA +LL + GY + E+ G L LGW L+ ASAW+ P
Sbjct: 349 GFRPVSLRGNPATQAGLLLGMLPWNGYTLVEENGTLRLGWKDLSLLTASAWKSQP 403
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,927,766,881
Number of Sequences: 33410
Number of Extensions: 1927766881
Number of Successful Extensions: 103031243
Number of sequences better than 0.0: 0
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