BLASTX 7.6.2
Query= RU08545 /QuerySize=192
(191 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G22170.1 | Symbols: FHY3 | FHY3 (FAR-RED ELONG... 114 1e-026
TAIR9_protein||AT3G22170.2 | Symbols: FHY3 | FHY3 (FAR-RED ELONG... 114 1e-026
TAIR9_protein||AT4G19990.1 | Symbols: FRS1 | FRS1 (FAR1-related ... 53 4e-008
TAIR9_protein||AT1G76320.1 | Symbols: FRS4 | FRS4 (FAR1-related ... 46 4e-006
TAIR9_protein||AT1G76320.2 | Symbols: FRS4 | FRS4 (FAR1-related ... 46 4e-006
TAIR9_protein||AT4G15090.1 | Symbols: FAR1 | FAR1 (FAR-RED IMPAI... 45 6e-006
>TAIR9_protein||AT3G22170.1 | Symbols: FHY3 | FHY3 (FAR-RED ELONGATED HYPOCOTYLS
3); transcription activator/ transcription factor |
chr3:7822359-7825414 REVERSE
Length = 840
Score = 114 bits (285), Expect = 1e-026
Identities = 53/63 (84%), Positives = 60/63 (95%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 SRRSKTSREFIDAKFACSRYGTKREYDKTYNNKPRARQNKQDPENATGRRSCSKTDCKAS 182
SRRSKT+REFIDAKFACSRYGTKREYDK++ N+PRARQ+KQDPEN GRR+C+KTDCKAS
Sbjct: 102 SRRSKTTREFIDAKFACSRYGTKREYDKSF-NRPRARQSKQDPENMAGRRTCAKTDCKAS 160
Query: 183 MHV 191
MHV
Sbjct: 161 MHV 163
>TAIR9_protein||AT3G22170.2 | Symbols: FHY3 | FHY3 (FAR-RED ELONGATED HYPOCOTYLS
3); transcription activator/ transcription factor |
chr3:7822359-7825414 REVERSE
Length = 840
Score = 114 bits (285), Expect = 1e-026
Identities = 53/63 (84%), Positives = 60/63 (95%), Gaps = 1/63 (1%)
Frame = +3
Query: 3 SRRSKTSREFIDAKFACSRYGTKREYDKTYNNKPRARQNKQDPENATGRRSCSKTDCKAS 182
SRRSKT+REFIDAKFACSRYGTKREYDK++ N+PRARQ+KQDPEN GRR+C+KTDCKAS
Sbjct: 102 SRRSKTTREFIDAKFACSRYGTKREYDKSF-NRPRARQSKQDPENMAGRRTCAKTDCKAS 160
Query: 183 MHV 191
MHV
Sbjct: 161 MHV 163
>TAIR9_protein||AT4G19990.1 | Symbols: FRS1 | FRS1 (FAR1-related sequence 1);
zinc ion binding | chr4:10832848-10835389 FORWARD
Length = 688
Score = 53 bits (125), Expect = 4e-008
Identities = 32/68 (47%), Positives = 42/68 (61%), Gaps = 11/68 (16%)
Frame = +3
Query: 3 SRRSKTSREFIDAKFACSRYGTKREYDKT-----YNNKPRARQNKQDPENATGRRSCSKT 167
SRRS+ + +FIDAKF C+RYG+K+E T N P+AR+ + RS SKT
Sbjct: 53 SRRSRMTGKFIDAKFVCTRYGSKKEDIDTGLGTDGFNIPQARKRGRI------NRSSSKT 106
Query: 168 DCKASMHV 191
DCKA +HV
Sbjct: 107 DCKAFLHV 114
>TAIR9_protein||AT1G76320.1 | Symbols: FRS4 | FRS4 (FAR1-related sequence 4);
zinc ion binding | chr1:28631404-28633886 FORWARD
Length = 733
Score = 46 bits (108), Expect = 4e-006
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Frame = +3
Query: 3 SRRSKTSREFIDAKFACSRYGTKREYDKTYNNKPRA 110
SRRS+ S+EFIDAKF+C RYG+K++ D N PRA
Sbjct: 29 SRRSRASKEFIDAKFSCIRYGSKQQSDDAIN--PRA 62
>TAIR9_protein||AT1G76320.2 | Symbols: FRS4 | FRS4 (FAR1-related sequence 4);
zinc ion binding | chr1:28631404-28633886 FORWARD
Length = 731
Score = 46 bits (108), Expect = 4e-006
Identities = 22/36 (61%), Positives = 28/36 (77%), Gaps = 2/36 (5%)
Frame = +3
Query: 3 SRRSKTSREFIDAKFACSRYGTKREYDKTYNNKPRA 110
SRRS+ S+EFIDAKF+C RYG+K++ D N PRA
Sbjct: 29 SRRSRASKEFIDAKFSCIRYGSKQQSDDAIN--PRA 62
>TAIR9_protein||AT4G15090.1 | Symbols: FAR1 | FAR1 (FAR-RED IMPAIRED RESPONSE
1); transcription activator/ transcription factor |
chr4:8614806-8617870 FORWARD
Length = 828
Score = 45 bits (106), Expect = 6e-006
Identities = 21/42 (50%), Positives = 29/42 (69%)
Frame = +3
Query: 3 SRRSKTSREFIDAKFACSRYGTKREYDKTYNNKPRARQNKQD 128
SRRSK +++FIDAKFACSRYG E + + ++ R+ K D
Sbjct: 83 SRRSKKTKDFIDAKFACSRYGVTPESESSGSSSRRSTVKKTD 124
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,927,766,881
Number of Sequences: 33410
Number of Extensions: 1927766881
Number of Successful Extensions: 103031243
Number of sequences better than 0.0: 0
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