BLASTX 7.6.2
Query= RU08800 /QuerySize=191
(190 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G05850.1 | Symbols: | leucine-rich repeat fam... 85 9e-018
TAIR9_protein||AT3G11330.1 | Symbols: | leucine-rich repeat fam... 82 5e-017
TAIR9_protein||AT1G12970.1 | Symbols: | leucine-rich repeat fam... 72 6e-014
TAIR9_protein||AT3G26500.1 | Symbols: | leucine-rich repeat fam... 72 8e-014
TAIR9_protein||AT2G17440.1 | Symbols: | leucine-rich repeat fam... 50 2e-007
TAIR9_protein||AT4G35470.1 | Symbols: | leucine-rich repeat fam... 48 1e-006
>TAIR9_protein||AT5G05850.1 | Symbols: | leucine-rich repeat family protein |
chr5:1762691-1764609 REVERSE
Length = 507
Score = 85 bits (208), Expect = 9e-018
Identities = 41/63 (65%), Positives = 50/63 (79%)
Frame = +1
Query: 1 LPDTFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDGNXXXXXXSDIVQQGVDAVK 180
LP +FGDL +L+ELDLSNNQIH+LPD FG L NLTKLNLD N ++V+QGVDAVK
Sbjct: 383 LPASFGDLISLQELDLSNNQIHSLPDAFGTLVNLTKLNLDQNPLVVPPDEVVKQGVDAVK 442
Query: 181 LFM 189
++M
Sbjct: 443 MYM 445
>TAIR9_protein||AT3G11330.1 | Symbols: | leucine-rich repeat family protein |
chr3:3552330-3554695 REVERSE
Length = 500
Score = 82 bits (202), Expect = 5e-017
Identities = 39/63 (61%), Positives = 51/63 (80%)
Frame = +1
Query: 1 LPDTFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDGNXXXXXXSDIVQQGVDAVK 180
LP +FG+L +L+ELDLSNNQIHALPDTFG LD+LTKLN+D N ++V++GV+AVK
Sbjct: 377 LPFSFGELISLQELDLSNNQIHALPDTFGTLDSLTKLNVDQNPLVVPPEEVVKEGVEAVK 436
Query: 181 LFM 189
+M
Sbjct: 437 TYM 439
>TAIR9_protein||AT1G12970.1 | Symbols: | leucine-rich repeat family protein |
chr1:4423727-4425632 FORWARD
Length = 465
Score = 72 bits (175), Expect = 6e-014
Identities = 36/63 (57%), Positives = 43/63 (68%)
Frame = +1
Query: 1 LPDTFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDGNXXXXXXSDIVQQGVDAVK 180
LPDT DL NL+ELDLSNNQI LPD+F RL+ L KLNLD N ++V Q +AV+
Sbjct: 340 LPDTISDLANLRELDLSNNQIRVLPDSFFRLEKLEKLNLDQNPLEYPPQEMVNQSAEAVR 399
Query: 181 LFM 189
FM
Sbjct: 400 EFM 402
Score = 47 bits (110), Expect = 2e-006
Identities = 25/53 (47%), Positives = 31/53 (58%)
Frame = +1
Query: 1 LPDTFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDGNXXXXXXSDIVQ 159
LPDT L L+ELDLS+N++ LPD+ G L NL LN+ GN I Q
Sbjct: 199 LPDTISGLEKLEELDLSSNRLVFLPDSIGLLLNLRILNVTGNKLTLLPESIAQ 251
>TAIR9_protein||AT3G26500.1 | Symbols: | leucine-rich repeat family protein |
chr3:9708195-9709944 REVERSE
Length = 472
Score = 72 bits (174), Expect = 8e-014
Identities = 35/63 (55%), Positives = 43/63 (68%)
Frame = +1
Query: 1 LPDTFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDGNXXXXXXSDIVQQGVDAVK 180
+PDT DLTNL+ELDLSNNQI A+PD+F RL L KLNLD N ++ QG + V+
Sbjct: 339 VPDTITDLTNLRELDLSNNQIQAIPDSFYRLRKLEKLNLDQNPLEIPSQEVATQGAEVVR 398
Query: 181 LFM 189
FM
Sbjct: 399 EFM 401
>TAIR9_protein||AT2G17440.1 | Symbols: | leucine-rich repeat family protein |
chr2:7571331-7573406 FORWARD
Length = 527
Score = 50 bits (118), Expect = 2e-007
Identities = 27/63 (42%), Positives = 35/63 (55%)
Frame = +1
Query: 1 LPDTFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDGNXXXXXXSDIVQQGVDAVK 180
LP G+L L+ELD+SNNQI LP +F L NL L + N DI ++G AV
Sbjct: 431 LPGLIGNLEKLEELDMSNNQIRFLPYSFKTLSNLRVLQTEQNPLEELPRDITEKGAQAVV 490
Query: 181 LFM 189
+M
Sbjct: 491 QYM 493
>TAIR9_protein||AT4G35470.1 | Symbols: | leucine-rich repeat family protein |
chr4:16846531-16848448 FORWARD
Length = 550
Score = 48 bits (112), Expect = 1e-006
Identities = 26/63 (41%), Positives = 34/63 (53%)
Frame = +1
Query: 1 LPDTFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDGNXXXXXXSDIVQQGVDAVK 180
LP + G+L L+ELD+SNNQI LPD+F L L N DI ++G AV
Sbjct: 447 LPRSIGNLEMLEELDISNNQIRVLPDSFKMLTKLRVFRAQENPLHIPPRDIAEKGPQAVV 506
Query: 181 LFM 189
+M
Sbjct: 507 QYM 509
Score = 47 bits (111), Expect = 2e-006
Identities = 23/42 (54%), Positives = 29/42 (69%)
Frame = +1
Query: 1 LPDTFGDLTNLKELDLSNNQIHALPDTFGRLDNLTKLNLDGN 126
LPD+ G L++L LDLS N I LP+T G L +LTKL+L N
Sbjct: 238 LPDSLGKLSSLTSLDLSENHIVVLPNTIGGLSSLTKLDLHSN 279
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,989,584,844
Number of Sequences: 33410
Number of Extensions: 1989584844
Number of Successful Extensions: 108668354
Number of sequences better than 0.0: 0
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