BLASTX 7.6.2
Query= RU08879 /QuerySize=361
(360 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G13960.1 | Symbols: AtGRF5 | AtGRF5 (GROWTH-RE... 110 2e-025
TAIR9_protein||AT4G37740.1 | Symbols: AtGRF2 | AtGRF2 (GROWTHREG... 106 4e-024
TAIR9_protein||AT2G22840.1 | Symbols: AtGRF1 | AtGRF1 (GROWTH-RE... 101 1e-022
TAIR9_protein||AT2G36400.1 | Symbols: AtGRF3 | AtGRF3 (GROWTH-RE... 87 1e-018
TAIR9_protein||AT3G52910.1 | Symbols: AtGRF4 | AtGRF4 (GROWTH-RE... 84 1e-017
TAIR9_protein||AT2G45480.1 | Symbols: AtGRF9 | AtGRF9 (GROWTH-RE... 66 4e-012
TAIR9_protein||AT2G06200.1 | Symbols: AtGRF6 | AtGRF6 (GROWTH-RE... 65 5e-012
TAIR9_protein||AT4G24150.1 | Symbols: AtGRF8 | AtGRF8 (GROWTH-RE... 46 3e-006
TAIR9_protein||AT5G53660.1 | Symbols: AtGRF7 | AtGRF7 (GROWTH-RE... 46 3e-006
>TAIR9_protein||AT3G13960.1 | Symbols: AtGRF5 | AtGRF5 (GROWTH-REGULATING FACTOR
5); transcription activator | chr3:4608526-4610160 FORWARD
Length = 398
Score = 110 bits (274), Expect = 2e-025
Identities = 54/104 (51%), Positives = 70/104 (67%), Gaps = 6/104 (5%)
Frame = -3
Query: 295 SLVGGGGHA---PLFTVSQWAEMEHQALVFKYLKAGLPVPPDLLVPIRNSFNLIYPDFLR 125
SL G G P FT +QW E+EHQAL++KY+ +G+PVPP+L+ IR S + L
Sbjct: 3 SLSGSSGRTIGRPPFTPTQWEELEHQALIYKYMVSGVPVPPELIFSIRRSLDTSLVSRLL 62
Query: 124 HPASLAYASF---CGKKIDPEPGRCRRTDGKKWRCSKDAHPDSK 2
SL + + G+K DPEPGRCRRTDGKKWRCS++A+PDSK
Sbjct: 63 PHQSLGWGCYQMGFGRKPDPEPGRCRRTDGKKWRCSREAYPDSK 106
>TAIR9_protein||AT4G37740.1 | Symbols: AtGRF2 | AtGRF2 (GROWTHREGULATING FACTOR
2); transcription activator | chr4:17725533-17727609 REVERSE
Length = 536
Score = 106 bits (262), Expect = 4e-024
Identities = 50/91 (54%), Positives = 64/91 (70%), Gaps = 7/91 (7%)
Frame = -3
Query: 262 FTVSQWAEMEHQALVFKYLKAGLPVPPDLLVPIRNSFNLIYPDFLRHPASLAYAS----F 95
FT++QWAE+E QAL++KY+ A +PVP LL+ I+ SF YP P+S + + F
Sbjct: 165 FTLTQWAELEQQALIYKYITANVPVPSSLLISIKKSF---YPYGSLPPSSFGWGTFHLGF 221
Query: 94 CGKKIDPEPGRCRRTDGKKWRCSKDAHPDSK 2
G +DPEPGRCRRTDGKKWRCS+DA PD K
Sbjct: 222 AGGNMDPEPGRCRRTDGKKWRCSRDAVPDQK 252
>TAIR9_protein||AT2G22840.1 | Symbols: AtGRF1 | AtGRF1 (GROWTH-REGULATING FACTOR
1); transcription activator | chr2:9728841-9731141 FORWARD
Length = 531
Score = 101 bits (249), Expect = 1e-022
Identities = 48/91 (52%), Positives = 63/91 (69%), Gaps = 7/91 (7%)
Frame = -3
Query: 262 FTVSQWAEMEHQALVFKYLKAGLPVPPDLLVPIRNSFNLIYPDFLRHPASLAYAS----F 95
F+++QWAE+E QAL++KY+ A +PVP LL+ ++ SF +P P S + S F
Sbjct: 134 FSLTQWAELEQQALIYKYITANVPVPSSLLLSLKKSF---FPYGSLPPNSFGWGSFHLGF 190
Query: 94 CGKKIDPEPGRCRRTDGKKWRCSKDAHPDSK 2
G +DPEPGRCRRTDGKKWRCS+DA PD K
Sbjct: 191 SGGNMDPEPGRCRRTDGKKWRCSRDAVPDQK 221
>TAIR9_protein||AT2G36400.1 | Symbols: AtGRF3 | AtGRF3 (GROWTH-REGULATING FACTOR
3); transcription activator | chr2:15270300-15272617 REVERSE
Length = 399
Score = 87 bits (215), Expect = 1e-018
Identities = 45/93 (48%), Positives = 60/93 (64%), Gaps = 6/93 (6%)
Frame = -3
Query: 262 FTVSQWAEMEHQALVFKYLKAGLPVPPDLLVPIRNSFNLIYPD-FLRHPAS----LAYAS 98
F+ +QW E+E QAL+++Y+ AG VP +LL+PI+ S + P FL HP A
Sbjct: 77 FSWAQWQELELQALIYRYMLAGAAVPQELLLPIKKSLLHLSPSYFLHHPLQHLPHYQPAW 136
Query: 97 FCGK-KIDPEPGRCRRTDGKKWRCSKDAHPDSK 2
+ G+ +DPEPGRCRRTDGKKWRCS+D K
Sbjct: 137 YLGRAAMDPEPGRCRRTDGKKWRCSRDVFAGHK 169
>TAIR9_protein||AT3G52910.1 | Symbols: AtGRF4 | AtGRF4 (GROWTH-REGULATING FACTOR
4); transcription activator | chr3:19616177-19618268 REVERSE
Length = 381
Score = 84 bits (206), Expect = 1e-017
Identities = 42/88 (47%), Positives = 60/88 (68%), Gaps = 7/88 (7%)
Frame = -3
Query: 262 FTVSQWAEMEHQALVFKYLKAGLPVPPDLLVPIRNSFNLIYP-DFLRHPASLAY-----A 101
F+ +QW E+E QAL+++Y+ AG VP +LL+PI+ S P FL HP ++ +
Sbjct: 83 FSWAQWQELELQALIYRYMLAGASVPQELLLPIKKSLLHQSPMHFLHHPLQHSFPHHQPS 142
Query: 100 SFCGK-KIDPEPGRCRRTDGKKWRCSKD 20
+ G+ +DPEPGRC+RTDGKKWRCS+D
Sbjct: 143 WYWGRGAMDPEPGRCKRTDGKKWRCSRD 170
>TAIR9_protein||AT2G45480.1 | Symbols: AtGRF9 | AtGRF9 (GROWTH-REGULATING FACTOR
9); transcription activator | chr2:18745583-18747403 FORWARD
Length = 430
Score = 66 bits (159), Expect = 4e-012
Identities = 38/84 (45%), Positives = 48/84 (57%), Gaps = 3/84 (3%)
Frame = -3
Query: 268 PLFTVSQWAEMEHQALVFKYLKAGLPVPPDLLVPIRNSFNLIYPDFLRHPASLAYASFCG 89
P +Q E QALV++Y++AGL VP L+VPI NS L + +S ++
Sbjct: 21 PWMKAAQLMEFRMQALVYRYIEAGLRVPHHLVVPIWNSLALSSSSNYNYHSSSLLSNKGV 80
Query: 88 KKID---PEPGRCRRTDGKKWRCS 26
ID EP RCRRTDGKKWRCS
Sbjct: 81 THIDTLETEPTRCRRTDGKKWRCS 104
Score = 50 bits (117), Expect = 3e-007
Identities = 20/24 (83%), Positives = 21/24 (87%)
Frame = -3
Query: 91 GKKIDPEPGRCRRTDGKKWRCSKD 20
G + D EPGRCRRTDGKKWRCSKD
Sbjct: 301 GVETDNEPGRCRRTDGKKWRCSKD 324
>TAIR9_protein||AT2G06200.1 | Symbols: AtGRF6 | AtGRF6 (GROWTH-REGULATING FACTOR
6); transcription activator | chr2:2426340-2427255 FORWARD
Length = 245
Score = 65 bits (158), Expect = 5e-012
Identities = 30/53 (56%), Positives = 35/53 (66%)
Frame = -3
Query: 160 NSFNLIYPDFLRHPASLAYASFCGKKIDPEPGRCRRTDGKKWRCSKDAHPDSK 2
+S + P H Y G+KID EPGRCRRTDGKKWRCSK+A+PDSK
Sbjct: 53 SSSSFFSPTLSPHFGWNVYEMGMGRKIDAEPGRCRRTDGKKWRCSKEAYPDSK 105
Score = 57 bits (136), Expect = 2e-009
Identities = 35/87 (40%), Positives = 46/87 (52%), Gaps = 12/87 (13%)
Frame = -3
Query: 262 FTVSQWAEMEHQALVFKYLKAGLPVPPDLLVPIRNSFNLIYPDFLRHPASLAYASFCGKK 83
FT SQW E+E+QALVFKYL A +PVPP LL I+ F F +S + +SF
Sbjct: 7 FTESQWEELENQALVFKYLAANMPVPPHLLFLIKRPFL-----FSSSSSSSSSSSFFSPT 61
Query: 82 IDP-------EPGRCRRTDGKKWRCSK 23
+ P E G R+ D + RC +
Sbjct: 62 LSPHFGWNVYEMGMGRKIDAEPGRCRR 88
>TAIR9_protein||AT4G24150.1 | Symbols: AtGRF8 | AtGRF8 (GROWTH-REGULATING FACTOR
8); transcription activator | chr4:12535972-12539387 FORWARD
Length = 494
Score = 46 bits (108), Expect = 3e-006
Identities = 18/26 (69%), Positives = 21/26 (80%)
Frame = -3
Query: 79 DPEPGRCRRTDGKKWRCSKDAHPDSK 2
D EP RC+RTDGKKWRCS++ PD K
Sbjct: 243 DLEPWRCKRTDGKKWRCSRNVIPDQK 268
Score = 46 bits (108), Expect = 3e-006
Identities = 22/47 (46%), Positives = 31/47 (65%), Gaps = 2/47 (4%)
Frame = -3
Query: 307 EMSRSLVGGGGHAPLFTVSQWAEMEHQALVFKYLKAGLPVPPDLLVP 167
EM RS+ G A F+ +QW E+E Q ++KY+ A +PVPP+LL P
Sbjct: 137 EMRRSMNEDAGAA--FSEAQWHELERQRNIYKYMMASVPVPPELLTP 181
>TAIR9_protein||AT5G53660.1 | Symbols: AtGRF7 | AtGRF7 (GROWTH-REGULATING FACTOR
7); transcription activator | chr5:21794636-21795929 FORWARD
Length = 366
Score = 46 bits (108), Expect = 3e-006
Identities = 23/42 (54%), Positives = 28/42 (66%), Gaps = 3/42 (7%)
Frame = -3
Query: 118 ASLAYASFCGKKI---DPEPGRCRRTDGKKWRCSKDAHPDSK 2
+S + AS C K D EPGRCRRTDGKKWRC+K+ + K
Sbjct: 91 SSPSSASPCNNKNIAGDLEPGRCRRTDGKKWRCAKEVVSNHK 132
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,018,912,189
Number of Sequences: 33410
Number of Extensions: 2018912189
Number of Successful Extensions: 108904459
Number of sequences better than 0.0: 0
|