BLASTX 7.6.2
Query= RU08989 /QuerySize=325
(324 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G04820.1 | Symbols: TUA4 | TUA4; structural co... 147 2e-036
TAIR9_protein||AT1G50010.1 | Symbols: TUA2 | TUA2; structural co... 147 2e-036
TAIR9_protein||AT4G14960.1 | Symbols: TUA6 | TUA6; structural co... 145 5e-036
TAIR9_protein||AT4G14960.2 | Symbols: TUA6 | TUA6; structural co... 145 5e-036
TAIR9_protein||AT5G19770.1 | Symbols: TUA3 | TUA3; structural co... 129 4e-031
TAIR9_protein||AT5G19780.1 | Symbols: TUA5 | TUA5; structural co... 129 4e-031
TAIR9_protein||AT1G64740.1 | Symbols: TUA1 | TUA1 (ALPHA-1 TUBUL... 123 3e-029
TAIR9_protein||AT5G12250.1 | Symbols: TUB6 | TUB6 (BETA-6 TUBULI... 55 7e-009
TAIR9_protein||AT5G62690.1 | Symbols: TUB2 | TUB2; GTP binding /... 54 2e-008
TAIR9_protein||AT5G62700.1 | Symbols: TUB3 | TUB3; GTP binding /... 54 2e-008
TAIR9_protein||AT4G20890.1 | Symbols: TUB9 | TUB9; GTP binding /... 54 2e-008
TAIR9_protein||AT1G20010.1 | Symbols: TUB5 | TUB5; structural co... 52 4e-008
TAIR9_protein||AT3G61650.1 | Symbols: TUBG1 | TUBG1 (GAMMA-TUBUL... 52 4e-008
TAIR9_protein||AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | GCP2... 52 4e-008
TAIR9_protein||AT5G44340.1 | Symbols: TUB4 | TUB4; structural co... 52 6e-008
TAIR9_protein||AT2G29550.1 | Symbols: TUB7 | TUB7; structural co... 50 3e-007
TAIR9_protein||AT5G23860.1 | Symbols: TUB8 | TUB8; structural co... 49 5e-007
>TAIR9_protein||AT1G04820.1 | Symbols: TUA4 | TUA4; structural constituent of
cytoskeleton | chr1:1356421-1358266 REVERSE
Length = 451
Score = 147 bits (369), Expect = 2e-036
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 299 HVPHAIFV 322
HVP A+FV
Sbjct: 61 HVPRAVFV 68
>TAIR9_protein||AT1G50010.1 | Symbols: TUA2 | TUA2; structural constituent of
cytoskeleton | chr1:18517737-18519729 FORWARD
Length = 451
Score = 147 bits (369), Expect = 2e-036
Identities = 66/68 (97%), Positives = 67/68 (98%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 60
Query: 299 HVPHAIFV 322
HVP A+FV
Sbjct: 61 HVPRAVFV 68
>TAIR9_protein||AT4G14960.1 | Symbols: TUA6 | TUA6; structural constituent of
cytoskeleton | chr4:8548753-8550319 REVERSE
Length = 428
Score = 145 bits (365), Expect = 5e-036
Identities = 65/68 (95%), Positives = 66/68 (97%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 299 HVPHAIFV 322
HVP A+FV
Sbjct: 61 HVPRAVFV 68
>TAIR9_protein||AT4G14960.2 | Symbols: TUA6 | TUA6; structural constituent of
cytoskeleton | chr4:8548769-8550319 REVERSE
Length = 451
Score = 145 bits (365), Expect = 5e-036
Identities = 65/68 (95%), Positives = 66/68 (97%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMP DKTVGGGDDAFNTFFSETGAGK
Sbjct: 1 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPGDKTVGGGDDAFNTFFSETGAGK 60
Query: 299 HVPHAIFV 322
HVP A+FV
Sbjct: 61 HVPRAVFV 68
>TAIR9_protein||AT5G19770.1 | Symbols: TUA3 | TUA3; structural constituent of
cytoskeleton | chr5:6682761-6684474 REVERSE
Length = 451
Score = 129 bits (323), Expect = 4e-031
Identities = 59/68 (86%), Positives = 61/68 (89%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD TVG DAFNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 299 HVPHAIFV 322
HVP A+FV
Sbjct: 61 HVPRAVFV 68
>TAIR9_protein||AT5G19780.1 | Symbols: TUA5 | TUA5; structural constituent of
cytoskeleton | chr5:6687212-6688926 FORWARD
Length = 451
Score = 129 bits (323), Expect = 4e-031
Identities = 59/68 (86%), Positives = 61/68 (89%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD TVG DAFNTFFSETGAGK
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGMMPSDTTVGVAHDAFNTFFSETGAGK 60
Query: 299 HVPHAIFV 322
HVP A+FV
Sbjct: 61 HVPRAVFV 68
>TAIR9_protein||AT1G64740.1 | Symbols: TUA1 | TUA1 (ALPHA-1 TUBULIN); structural
constituent of cytoskeleton | chr1:24050114-24052296 FORWARD
Length = 451
Score = 123 bits (307), Expect = 3e-029
Identities = 55/68 (80%), Positives = 60/68 (88%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE ISIHIGQAGIQVGN+CWELYCLEHGIQPDG MPSD TVG DAFNTFFSET +G+
Sbjct: 1 MREIISIHIGQAGIQVGNSCWELYCLEHGIQPDGTMPSDSTVGACHDAFNTFFSETSSGQ 60
Query: 299 HVPHAIFV 322
HVP A+F+
Sbjct: 61 HVPRAVFL 68
>TAIR9_protein||AT5G12250.1 | Symbols: TUB6 | TUB6 (BETA-6 TUBULIN); structural
constituent of cytoskeleton | chr5:3961317-3962971 REVERSE
Length = 450
Score = 55 bits (131), Expect = 7e-009
Identities = 28/71 (39%), Positives = 40/71 (56%), Gaps = 8/71 (11%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGD---DAFNTFFSETG 289
MRE + I GQ G Q+G+ WE+ C EHGI P G + VG D + N +++E
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVCDEHGIDPTG-----RYVGNSDLQLERVNVYYNEAS 55
Query: 290 AGKHVPHAIFV 322
G++VP AI +
Sbjct: 56 CGRYVPRAILM 66
>TAIR9_protein||AT5G62690.1 | Symbols: TUB2 | TUB2; GTP binding / GTPase/
structural molecule | chr5:25181560-25183501 FORWARD
Length = 451
Score = 54 bits (128), Expect = 2e-008
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE + I GQ G Q+G WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 299 HVPHAIFV 322
VP A+ +
Sbjct: 59 FVPRAVLM 66
>TAIR9_protein||AT5G62700.1 | Symbols: TUB3 | TUB3; GTP binding / GTPase/
structural molecule | chr5:25184501-25186426 FORWARD
Length = 451
Score = 54 bits (128), Expect = 2e-008
Identities = 25/68 (36%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE + I GQ G Q+G WE+ C EHGI P G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDPTGRYTGDSDL--QLERINVYYNEASCGR 58
Query: 299 HVPHAIFV 322
VP A+ +
Sbjct: 59 FVPRAVLM 66
>TAIR9_protein||AT4G20890.1 | Symbols: TUB9 | TUB9; GTP binding / GTPase/
structural molecule | chr4:11182218-11183840 FORWARD
Length = 445
Score = 54 bits (127), Expect = 2e-008
Identities = 27/68 (39%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE + I GQ G Q+G WE+ C EHGI GQ D + + N +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICGEHGIDQTGQSCGDTDL--QLERINVYFNEASGGK 58
Query: 299 HVPHAIFV 322
+VP A+ +
Sbjct: 59 YVPRAVLM 66
>TAIR9_protein||AT1G20010.1 | Symbols: TUB5 | TUB5; structural constituent of
cytoskeleton | chr1:6938033-6940481 REVERSE
Length = 450
Score = 52 bits (124), Expect = 4e-008
Identities = 25/68 (36%), Positives = 38/68 (55%), Gaps = 1/68 (1%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE + I GQ G Q+G+ WE+ C EHGI G+ D T + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVICDEHGIDSTGRYSGD-TADLQLERINVYYNEASGGR 59
Query: 299 HVPHAIFV 322
+VP A+ +
Sbjct: 60 YVPRAVLM 67
>TAIR9_protein||AT3G61650.1 | Symbols: TUBG1 | TUBG1 (GAMMA-TUBULIN); GTP
binding / GTPase/ structural molecule | chr3:22812601-22815011 REVERSE
Length = 475
Score = 52 bits (124), Expect = 4e-008
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 122 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKH 301
RE I++ +GQ G Q+G W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 302 VPHAIFV 322
+P A+ +
Sbjct: 61 IPRALLI 67
>TAIR9_protein||AT5G05620.1 | Symbols: TUBG2, ATGCP2, GCP2 | GCP2 (GAMMA-TUBULIN
COMPLEX PROTEIN 2); GTP binding / GTPase/ structural molecule |
chr5:1679340-1681719 FORWARD
Length = 475
Score = 52 bits (124), Expect = 4e-008
Identities = 25/67 (37%), Positives = 37/67 (55%), Gaps = 2/67 (2%)
Frame = +2
Query: 122 RECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGKH 301
RE I++ +GQ G Q+G W+ CLEHGI DG + T GG D + FF + +
Sbjct: 3 REIITLQVGQCGNQIGMEFWKQLCLEHGISKDGILEDFATQGG--DRKDVFFYQADDQHY 60
Query: 302 VPHAIFV 322
+P A+ +
Sbjct: 61 IPRALLI 67
>TAIR9_protein||AT5G44340.1 | Symbols: TUB4 | TUB4; structural constituent of
cytoskeleton | chr5:17859442-17860994 REVERSE
Length = 445
Score = 52 bits (123), Expect = 6e-008
Identities = 26/68 (38%), Positives = 37/68 (54%), Gaps = 2/68 (2%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE + I GQ G Q+G WE+ C EHGI GQ D + + + +F+E GK
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVICDEHGIDHTGQYVGDSPL--QLERIDVYFNEASGGK 58
Query: 299 HVPHAIFV 322
+VP A+ +
Sbjct: 59 YVPRAVLM 66
>TAIR9_protein||AT2G29550.1 | Symbols: TUB7 | TUB7; structural constituent of
cytoskeleton | chr2:12644258-12645932 REVERSE
Length = 450
Score = 50 bits (117), Expect = 3e-007
Identities = 24/68 (35%), Positives = 38/68 (55%), Gaps = 2/68 (2%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE + I GQ G Q+G+ WE+ LEHGI G+ D + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGSKFWEVVNLEHGIDQTGRYVGDSEL--QLERVNVYYNEASCGR 58
Query: 299 HVPHAIFV 322
+VP A+ +
Sbjct: 59 YVPRAVLM 66
>TAIR9_protein||AT5G23860.1 | Symbols: TUB8 | TUB8; structural constituent of
cytoskeleton | chr5:8042962-8044528 FORWARD
Length = 450
Score = 49 bits (115), Expect = 5e-007
Identities = 23/68 (33%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = +2
Query: 119 MRECISIHIGQAGIQVGNACWELYCLEHGIQPDGQMPSDKTVGGGDDAFNTFFSETGAGK 298
MRE + I GQ G Q+G WE+ C EHGI G+ + + + N +++E G+
Sbjct: 1 MREILHIQGGQCGNQIGAKFWEVVCAEHGIDSTGRYQGENDL--QLERVNVYYNEASCGR 58
Query: 299 HVPHAIFV 322
VP A+ +
Sbjct: 59 FVPRAVLM 66
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,018,912,189
Number of Sequences: 33410
Number of Extensions: 2018912189
Number of Successful Extensions: 108904459
Number of sequences better than 0.0: 0
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