BLASTX 7.6.2
Query= RU09088 /QuerySize=416
(415 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G72370.1 | Symbols: P40, AP40, RP40, RPSAA | P... 190 5e-049
TAIR9_protein||AT1G72370.2 | Symbols: P40, AP40, RP40, RPSAA | P... 190 5e-049
TAIR9_protein||AT3G04770.1 | Symbols: RPSAb | RPSAb (40S ribosom... 189 6e-049
TAIR9_protein||AT3G04770.2 | Symbols: RPSAb | RPSAb (40S ribosom... 189 6e-049
>TAIR9_protein||AT1G72370.1 | Symbols: P40, AP40, RP40, RPSAA | P40; structural
constituent of ribosome | chr1:27243148-27244842 REVERSE
Length = 299
Score = 190 bits (480), Expect = 5e-049
Identities = 91/100 (91%), Positives = 98/100 (98%)
Frame = -3
Query: 302 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV 123
QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV
Sbjct: 11 QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70
Query: 122 AIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
AIENP+DIIVQSARPYGQRAVLKFAQ+TGANAIAGRHTPG
Sbjct: 71 AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPG 110
>TAIR9_protein||AT1G72370.2 | Symbols: P40, AP40, RP40, RPSAA | P40; structural
constituent of ribosome | chr1:27243148-27244842 REVERSE
Length = 295
Score = 190 bits (480), Expect = 5e-049
Identities = 91/100 (91%), Positives = 98/100 (98%)
Frame = -3
Query: 302 QLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVIV 123
QLSQKEAD++MM AAEVHLGTKNC++QMERYVFKRRNDGIYI NLGKTWEKLQ+AARVIV
Sbjct: 11 QLSQKEADVRMMCAAEVHLGTKNCNYQMERYVFKRRNDGIYIFNLGKTWEKLQMAARVIV 70
Query: 122 AIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
AIENP+DIIVQSARPYGQRAVLKFAQ+TGANAIAGRHTPG
Sbjct: 71 AIENPQDIIVQSARPYGQRAVLKFAQYTGANAIAGRHTPG 110
>TAIR9_protein||AT3G04770.1 | Symbols: RPSAb | RPSAb (40S ribosomal protein SA
B); structural constituent of ribosome | chr3:1309465-1310846 REVERSE
Length = 333
Score = 189 bits (479), Expect = 6e-049
Identities = 90/101 (89%), Positives = 100/101 (99%)
Frame = -3
Query: 305 RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVI 126
RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVI
Sbjct: 11 RQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVI 70
Query: 125 VAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
VAIENPKDIIVQSARPYGQRAVLKFAQ+TG NAIAGRHTPG
Sbjct: 71 VAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPG 111
>TAIR9_protein||AT3G04770.2 | Symbols: RPSAb | RPSAb (40S ribosomal protein SA
B); structural constituent of ribosome | chr3:1309544-1310846 REVERSE
Length = 281
Score = 189 bits (479), Expect = 6e-049
Identities = 90/101 (89%), Positives = 100/101 (99%)
Frame = -3
Query: 305 RQLSQKEADIQMMLAAEVHLGTKNCDFQMERYVFKRRNDGIYIINLGKTWEKLQLAARVI 126
RQ+S+KEADIQMML+A+VHLGTKNC++QMERYVFKRR+DGIYIINLGKTW+KLQ+AARVI
Sbjct: 11 RQVSEKEADIQMMLSADVHLGTKNCNYQMERYVFKRRDDGIYIINLGKTWDKLQMAARVI 70
Query: 125 VAIENPKDIIVQSARPYGQRAVLKFAQHTGANAIAGRHTPG 3
VAIENPKDIIVQSARPYGQRAVLKFAQ+TG NAIAGRHTPG
Sbjct: 71 VAIENPKDIIVQSARPYGQRAVLKFAQYTGVNAIAGRHTPG 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,018,912,189
Number of Sequences: 33410
Number of Extensions: 2018912189
Number of Successful Extensions: 108904459
Number of sequences better than 0.0: 0
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