BLASTX 7.6.2
Query= RU09182 /QuerySize=244
(243 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G26880.1 | Symbols: | 60S ribosomal protein L... 145 5e-036
TAIR9_protein||AT1G26880.2 | Symbols: | 60S ribosomal protein L... 145 5e-036
TAIR9_protein||AT1G69620.1 | Symbols: RPL34 | RPL34 (RIBOSOMAL P... 143 2e-035
TAIR9_protein||AT3G28900.1 | Symbols: | 60S ribosomal protein L... 140 2e-034
>TAIR9_protein||AT1G26880.1 | Symbols: | 60S ribosomal protein L34 (RPL34A) |
chr1:9315640-9316681 REVERSE
Length = 121
Score = 145 bits (365), Expect = 5e-036
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = +2
Query: 29 MVQRLTYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 208
MVQRL YRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 209 EYKRSRLSRNR 241
EYKRSRLSRNR
Sbjct: 61 EYKRSRLSRNR 71
>TAIR9_protein||AT1G26880.2 | Symbols: | 60S ribosomal protein L34 (RPL34A) |
chr1:9315798-9316681 REVERSE
Length = 97
Score = 145 bits (365), Expect = 5e-036
Identities = 69/71 (97%), Positives = 70/71 (98%)
Frame = +2
Query: 29 MVQRLTYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 208
MVQRL YRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRP+
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPS 60
Query: 209 EYKRSRLSRNR 241
EYKRSRLSRNR
Sbjct: 61 EYKRSRLSRNR 71
>TAIR9_protein||AT1G69620.1 | Symbols: RPL34 | RPL34 (RIBOSOMAL PROTEIN L34);
structural constituent of ribosome | chr1:26189900-26191081 FORWARD
Length = 120
Score = 143 bits (360), Expect = 2e-035
Identities = 68/71 (95%)
Frame = +2
Query: 29 MVQRLTYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 208
MVQRL YRSRHSYATKSNQHRIVKTPGGKL YQTTKKRASGPKCPVTGKRIQGIPHLRP
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTKKRASGPKCPVTGKRIQGIPHLRPT 60
Query: 209 EYKRSRLSRNR 241
EYKRSRLSRNR
Sbjct: 61 EYKRSRLSRNR 71
>TAIR9_protein||AT3G28900.1 | Symbols: | 60S ribosomal protein L34 (RPL34C) |
chr3:10902864-10904415 REVERSE
Length = 121
Score = 140 bits (351), Expect = 2e-034
Identities = 66/70 (94%), Positives = 67/70 (95%)
Frame = +2
Query: 29 MVQRLTYRSRHSYATKSNQHRIVKTPGGKLVYQTTKKRASGPKCPVTGKRIQGIPHLRPA 208
MVQRL YRSRHSYATKSNQHRIVKTPGGKL YQTT KRASGPKCPVTGKRIQGIPHLRPA
Sbjct: 1 MVQRLVYRSRHSYATKSNQHRIVKTPGGKLTYQTTNKRASGPKCPVTGKRIQGIPHLRPA 60
Query: 209 EYKRSRLSRN 238
EYKRSRL+RN
Sbjct: 61 EYKRSRLARN 70
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,047,743,481
Number of Sequences: 33410
Number of Extensions: 2047743481
Number of Successful Extensions: 109010649
Number of sequences better than 0.0: 0
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