BLASTX 7.6.2
Query= RU09239 /QuerySize=230
(229 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G43010.1 | Symbols: PIF4, SRL2 | PIF4 (phytoch... 51 1e-007
TAIR9_protein||AT2G43010.2 | Symbols: PIF4, SRL2 | PIF4 (phytoch... 51 1e-007
TAIR9_protein||AT4G36930.1 | Symbols: SPT | SPT (SPATULA); DNA b... 51 1e-007
TAIR9_protein||AT5G67110.1 | Symbols: ALC | ALC (ALCATRAZ); DNA ... 51 1e-007
TAIR9_protein||AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | PIF3 (P... 50 3e-007
TAIR9_protein||AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | PIF3 (P... 50 3e-007
TAIR9_protein||AT3G59060.1 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCH... 49 4e-007
TAIR9_protein||AT3G59060.2 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCH... 49 4e-007
TAIR9_protein||AT3G59060.3 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCH... 49 4e-007
TAIR9_protein||AT3G59060.4 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCH... 49 4e-007
TAIR9_protein||AT2G20180.2 | Symbols: PIL5 | PIL5 (PHYTOCHROME I... 49 7e-007
TAIR9_protein||AT2G20180.1 | Symbols: PIL5, PIF1 | PIL5 (PHYTOCH... 49 7e-007
TAIR9_protein||AT5G67110.3 | Symbols: ALC | ALC (ALCATRAZ); DNA ... 45 6e-006
>TAIR9_protein||AT2G43010.1 | Symbols: PIF4, SRL2 | PIF4 (phytochrome
interacting factor 4); DNA binding / protein binding / transcription
factor | chr2:17887003-17888823 FORWARD
Length = 431
Score = 51 bits (121), Expect = 1e-007
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
PH +KTDKAS+LDEAI+YLKSLQLQLQV
Sbjct: 285 PHCSKTDKASILDEAIDYLKSLQLQLQV 312
>TAIR9_protein||AT2G43010.2 | Symbols: PIF4, SRL2 | PIF4 (phytochrome
interacting factor 4); DNA binding / protein binding / transcription
factor | chr2:17887003-17888823 FORWARD
Length = 429
Score = 51 bits (121), Expect = 1e-007
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
PH +KTDKAS+LDEAI+YLKSLQLQLQV
Sbjct: 285 PHCSKTDKASILDEAIDYLKSLQLQLQV 312
>TAIR9_protein||AT4G36930.1 | Symbols: SPT | SPT (SPATULA); DNA binding /
transcription factor | chr4:17414167-17415945 FORWARD
Length = 374
Score = 51 bits (121), Expect = 1e-007
Identities = 24/28 (85%), Positives = 27/28 (96%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
P+SNKTDKASMLDEAIEYLK LQLQ+Q+
Sbjct: 225 PNSNKTDKASMLDEAIEYLKQLQLQVQM 252
>TAIR9_protein||AT5G67110.1 | Symbols: ALC | ALC (ALCATRAZ); DNA binding /
transcription factor | chr5:26785332-26786338 REVERSE
Length = 211
Score = 51 bits (120), Expect = 1e-007
Identities = 24/27 (88%), Positives = 26/27 (96%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQ 82
P+SNKTDKASMLDEAIEYLK LQLQ+Q
Sbjct: 121 PNSNKTDKASMLDEAIEYLKQLQLQVQ 147
>TAIR9_protein||AT1G09530.1 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME
INTERACTING FACTOR 3); DNA binding / protein binding / transcription
factor/ transcription regulator | chr1:3077216-3079367 FORWARD
Length = 525
Score = 50 bits (117), Expect = 3e-007
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
P+ NK DKASMLDEAIEYLKSLQLQ+Q+
Sbjct: 371 PNCNKVDKASMLDEAIEYLKSLQLQVQI 398
>TAIR9_protein||AT1G09530.2 | Symbols: PIF3, POC1, PAP3 | PIF3 (PHYTOCHROME
INTERACTING FACTOR 3); DNA binding / protein binding / transcription
factor/ transcription regulator | chr1:3077216-3079367 FORWARD
Length = 525
Score = 50 bits (117), Expect = 3e-007
Identities = 23/28 (82%), Positives = 26/28 (92%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
P+ NK DKASMLDEAIEYLKSLQLQ+Q+
Sbjct: 371 PNCNKVDKASMLDEAIEYLKSLQLQVQI 398
>TAIR9_protein||AT3G59060.1 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor |
chr3:21828189-21829895 REVERSE
Length = 443
Score = 49 bits (116), Expect = 4e-007
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
PH ++TDKAS+LDEAI+YLKSLQ+QLQV
Sbjct: 284 PHCSRTDKASILDEAIDYLKSLQMQLQV 311
>TAIR9_protein||AT3G59060.2 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor |
chr3:21828189-21829895 REVERSE
Length = 445
Score = 49 bits (116), Expect = 4e-007
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
PH ++TDKAS+LDEAI+YLKSLQ+QLQV
Sbjct: 284 PHCSRTDKASILDEAIDYLKSLQMQLQV 311
>TAIR9_protein||AT3G59060.3 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor |
chr3:21828189-21829895 REVERSE
Length = 445
Score = 49 bits (116), Expect = 4e-007
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
PH ++TDKAS+LDEAI+YLKSLQ+QLQV
Sbjct: 284 PHCSRTDKASILDEAIDYLKSLQMQLQV 311
>TAIR9_protein||AT3G59060.4 | Symbols: PIL6, PIF5 | PIL6 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 6); DNA binding / transcription factor |
chr3:21828189-21829895 REVERSE
Length = 445
Score = 49 bits (116), Expect = 4e-007
Identities = 22/28 (78%), Positives = 27/28 (96%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
PH ++TDKAS+LDEAI+YLKSLQ+QLQV
Sbjct: 284 PHCSRTDKASILDEAIDYLKSLQMQLQV 311
>TAIR9_protein||AT2G20180.2 | Symbols: PIL5 | PIL5 (PHYTOCHROME INTERACTING
FACTOR 3-LIKE 5); DNA binding / phytochrome binding / transcription
factor | chr2:8704525-8706538 REVERSE
Length = 479
Score = 49 bits (114), Expect = 7e-007
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
P NK+DKASMLDEAIEY+KSLQLQ+Q+
Sbjct: 312 PRCNKSDKASMLDEAIEYMKSLQLQIQM 339
>TAIR9_protein||AT2G20180.1 | Symbols: PIL5, PIF1 | PIL5 (PHYTOCHROME
INTERACTING FACTOR 3-LIKE 5); DNA binding / phytochrome binding /
transcription factor | chr2:8704525-8706237 REVERSE
Length = 408
Score = 49 bits (114), Expect = 7e-007
Identities = 22/28 (78%), Positives = 26/28 (92%)
Frame = +2
Query: 2 PHSNKTDKASMLDEAIEYLKSLQLQLQV 85
P NK+DKASMLDEAIEY+KSLQLQ+Q+
Sbjct: 241 PRCNKSDKASMLDEAIEYMKSLQLQIQM 268
>TAIR9_protein||AT5G67110.3 | Symbols: ALC | ALC (ALCATRAZ); DNA binding /
transcription factor | chr5:26785332-26786338 REVERSE
Length = 189
Score = 45 bits (106), Expect = 6e-006
Identities = 22/25 (88%), Positives = 23/25 (92%)
Frame = +2
Query: 8 SNKTDKASMLDEAIEYLKSLQLQLQ 82
S KTDKASMLDEAIEYLK LQLQ+Q
Sbjct: 101 SEKTDKASMLDEAIEYLKQLQLQVQ 125
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,047,743,481
Number of Sequences: 33410
Number of Extensions: 2047743481
Number of Successful Extensions: 109010649
Number of sequences better than 0.0: 0
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