BLASTX 7.6.2
Query= RU09616 /QuerySize=325
(324 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G10200.1 | Symbols: WLIM1 | WLIM1; transcripti... 165 5e-042
TAIR9_protein||AT2G39900.1 | Symbols: | LIM domain-containing p... 141 1e-034
TAIR9_protein||AT3G55770.1 | Symbols: | LIM domain-containing p... 138 6e-034
TAIR9_protein||AT3G55770.2 | Symbols: | LIM domain-containing p... 138 6e-034
TAIR9_protein||AT3G55770.3 | Symbols: | LIM domain-containing p... 138 6e-034
TAIR9_protein||AT3G55770.4 | Symbols: | LIM domain-containing p... 138 6e-034
TAIR9_protein||AT3G55770.5 | Symbols: | LIM domain-containing p... 138 6e-034
TAIR9_protein||AT3G61230.1 | Symbols: | LIM domain-containing p... 131 7e-032
TAIR9_protein||AT2G45800.1 | Symbols: | LIM domain-containing p... 131 1e-031
TAIR9_protein||AT2G45800.2 | Symbols: | LIM domain-containing p... 131 1e-031
TAIR9_protein||AT1G01780.1 | Symbols: | LIM domain-containing p... 126 2e-030
TAIR9_protein||AT3G55770.6 | Symbols: | LIM domain-containing p... 91 9e-020
>TAIR9_protein||AT1G10200.1 | Symbols: WLIM1 | WLIM1; transcription factor/ zinc
ion binding | chr1:3346677-3347763 REVERSE
Length = 191
Score = 165 bits (417), Expect = 5e-042
Identities = 77/112 (68%), Positives = 90/112 (80%), Gaps = 4/112 (3%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVR-DRSAD---QVNSKVSSMFAG 157
LSNY+SFEGVLYC+PHFDQ FK TGSL+KSFEG PK + DR + +KVS+MF G
Sbjct: 46 LSNYNSFEGVLYCRPHFDQNFKRTGSLEKSFEGTPKIGKPDRPLEGERPAGTKVSNMFGG 105
Query: 156 TQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
T+EKCV C KTVYP EKV V+GT YHK+CF+CTHGGC ISPSNY+AHE +LY
Sbjct: 106 TREKCVGCDKTVYPIEKVSVNGTLYHKSCFKCTHGGCTISPSNYIAHEGKLY 157
Score = 63 bits (151), Expect = 3e-011
Identities = 29/55 (52%), Positives = 35/55 (63%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
FAGT +KC+AC KTVY +K+ D YHKACFRC H + SNY + E LY
Sbjct: 3 FAGTTQKCMACDKTVYLVDKLTADNRVYHKACFRCHHCKGTLKLSNYNSFEGVLY 57
>TAIR9_protein||AT2G39900.1 | Symbols: | LIM domain-containing protein |
chr2:16659136-16660267 FORWARD
Length = 201
Score = 141 bits (353), Expect = 1e-034
Identities = 63/111 (56%), Positives = 82/111 (73%), Gaps = 3/111 (2%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVN---SKVSSMFAGT 154
LSNYSS EGV+YC+PHF+QLFK +GS K+F+ K + D+ ++N S+++ MF+GT
Sbjct: 46 LSNYSSMEGVVYCRPHFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGT 105
Query: 153 QEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
Q+KC C KTVYP EKV V+ YHK+CF+C+HGGC ISPSNY A E LY
Sbjct: 106 QDKCATCTKTVYPIEKVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILY 156
Score = 69 bits (167), Expect = 5e-013
Identities = 30/55 (54%), Positives = 38/55 (69%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GTQ+KC AC+KTVYP E + DG SYHKACF+C+H + SNY + E +Y
Sbjct: 3 FTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVY 57
>TAIR9_protein||AT3G55770.1 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 138 bits (347), Expect = 6e-034
Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 4/111 (3%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVN---SKVSSMFAGT 154
LS+YSS EGVLYCKPHF+QLFK +GS +K+F+ +P D+S ++ S+V+ F+GT
Sbjct: 46 LSSYSSMEGVLYCKPHFEQLFKESGSFNKNFQ-SPAKSADKSTPELTRTPSRVAGRFSGT 104
Query: 153 QEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
QEKC C KTVYP EKV V+ +YHK+CF+C+HGGC ISPSNY A E LY
Sbjct: 105 QEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILY 155
Score = 65 bits (156), Expect = 9e-012
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GTQ+KC AC+KTVY E + DG YHK+CF+CTH + S+Y + E LY
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLY 57
>TAIR9_protein||AT3G55770.2 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 138 bits (347), Expect = 6e-034
Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 4/111 (3%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVN---SKVSSMFAGT 154
LS+YSS EGVLYCKPHF+QLFK +GS +K+F+ +P D+S ++ S+V+ F+GT
Sbjct: 46 LSSYSSMEGVLYCKPHFEQLFKESGSFNKNFQ-SPAKSADKSTPELTRTPSRVAGRFSGT 104
Query: 153 QEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
QEKC C KTVYP EKV V+ +YHK+CF+C+HGGC ISPSNY A E LY
Sbjct: 105 QEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILY 155
Score = 65 bits (156), Expect = 9e-012
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GTQ+KC AC+KTVY E + DG YHK+CF+CTH + S+Y + E LY
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLY 57
>TAIR9_protein||AT3G55770.3 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 138 bits (347), Expect = 6e-034
Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 4/111 (3%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVN---SKVSSMFAGT 154
LS+YSS EGVLYCKPHF+QLFK +GS +K+F+ +P D+S ++ S+V+ F+GT
Sbjct: 46 LSSYSSMEGVLYCKPHFEQLFKESGSFNKNFQ-SPAKSADKSTPELTRTPSRVAGRFSGT 104
Query: 153 QEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
QEKC C KTVYP EKV V+ +YHK+CF+C+HGGC ISPSNY A E LY
Sbjct: 105 QEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILY 155
Score = 65 bits (156), Expect = 9e-012
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GTQ+KC AC+KTVY E + DG YHK+CF+CTH + S+Y + E LY
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLY 57
>TAIR9_protein||AT3G55770.4 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 138 bits (347), Expect = 6e-034
Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 4/111 (3%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVN---SKVSSMFAGT 154
LS+YSS EGVLYCKPHF+QLFK +GS +K+F+ +P D+S ++ S+V+ F+GT
Sbjct: 46 LSSYSSMEGVLYCKPHFEQLFKESGSFNKNFQ-SPAKSADKSTPELTRTPSRVAGRFSGT 104
Query: 153 QEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
QEKC C KTVYP EKV V+ +YHK+CF+C+HGGC ISPSNY A E LY
Sbjct: 105 QEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILY 155
Score = 65 bits (156), Expect = 9e-012
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GTQ+KC AC+KTVY E + DG YHK+CF+CTH + S+Y + E LY
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLY 57
>TAIR9_protein||AT3G55770.5 | Symbols: | LIM domain-containing protein |
chr3:20703799-20705115 FORWARD
Length = 200
Score = 138 bits (347), Expect = 6e-034
Identities = 65/111 (58%), Positives = 83/111 (74%), Gaps = 4/111 (3%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVN---SKVSSMFAGT 154
LS+YSS EGVLYCKPHF+QLFK +GS +K+F+ +P D+S ++ S+V+ F+GT
Sbjct: 46 LSSYSSMEGVLYCKPHFEQLFKESGSFNKNFQ-SPAKSADKSTPELTRTPSRVAGRFSGT 104
Query: 153 QEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
QEKC C KTVYP EKV V+ +YHK+CF+C+HGGC ISPSNY A E LY
Sbjct: 105 QEKCATCSKTVYPIEKVTVESQTYHKSCFKCSHGGCPISPSNYAALEGILY 155
Score = 65 bits (156), Expect = 9e-012
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GTQ+KC AC+KTVY E + DG YHK+CF+CTH + S+Y + E LY
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLY 57
>TAIR9_protein||AT3G61230.1 | Symbols: | LIM domain-containing protein |
chr3:22664601-22665503 REVERSE
Length = 214
Score = 131 bits (329), Expect = 7e-032
Identities = 57/108 (52%), Positives = 78/108 (72%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVNSKVSSMFAGTQEK 145
+ NYSS +GVLYCK HF+QLFK +G+ K+F+ KT + A + +++SS F+GTQ+K
Sbjct: 47 ICNYSSMDGVLYCKTHFEQLFKESGNFSKNFQTAGKTEKSNDATKAPNRLSSFFSGTQDK 106
Query: 144 CVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
C ACKKTVYP EK+ ++G SYHK CFRC H GC ++ S+Y A + LY
Sbjct: 107 CAACKKTVYPLEKMTMEGESYHKTCFRCAHSGCPLTHSSYAALDGVLY 154
Score = 56 bits (133), Expect = 4e-009
Identities = 24/55 (43%), Positives = 34/55 (61%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GT +KC AC KTVY + + ++G YHK+CFRC+H + NY + + LY
Sbjct: 4 FTGTTDKCKACDKTVYVMDLMTLEGMPYHKSCFRCSHCNGTLVICNYSSMDGVLY 58
>TAIR9_protein||AT2G45800.1 | Symbols: | LIM domain-containing protein |
chr2:18858153-18859007 REVERSE
Length = 227
Score = 131 bits (328), Expect = 1e-031
Identities = 58/108 (53%), Positives = 76/108 (70%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVNSKVSSMFAGTQEK 145
+SNYSS +GVLYCKPHF+QLFK +G+ K+F+ + + SK+SS F+GTQ+K
Sbjct: 46 ISNYSSMDGVLYCKPHFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDK 105
Query: 144 CVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
C CKKTVYP EKV ++G SYHK CFRCTH GC ++ S+Y + LY
Sbjct: 106 CATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLY 153
Score = 59 bits (142), Expect = 4e-010
Identities = 26/55 (47%), Positives = 36/55 (65%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GT +KC AC KTVY + + ++G +YHK+CFRCTH + SNY + + LY
Sbjct: 3 FTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLY 57
>TAIR9_protein||AT2G45800.2 | Symbols: | LIM domain-containing protein |
chr2:18858153-18858823 REVERSE
Length = 196
Score = 131 bits (328), Expect = 1e-031
Identities = 58/108 (53%), Positives = 76/108 (70%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVNSKVSSMFAGTQEK 145
+SNYSS +GVLYCKPHF+QLFK +G+ K+F+ + + SK+SS F+GTQ+K
Sbjct: 15 ISNYSSMDGVLYCKPHFEQLFKESGNYSKNFQAGKTEKPNDHLTRTPSKLSSFFSGTQDK 74
Query: 144 CVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
C CKKTVYP EKV ++G SYHK CFRCTH GC ++ S+Y + LY
Sbjct: 75 CATCKKTVYPLEKVTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLY 122
>TAIR9_protein||AT1G01780.1 | Symbols: | LIM domain-containing protein |
chr1:282919-284082 FORWARD
Length = 206
Score = 126 bits (316), Expect = 2e-030
Identities = 55/108 (50%), Positives = 76/108 (70%), Gaps = 2/108 (1%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVNSKVSSMFAGTQEK 145
+SNYSS +GVLYCK HF+QLFK +G+ K+F+ P + SK+SS+F GTQ+K
Sbjct: 46 MSNYSSMDGVLYCKTHFEQLFKESGNFSKNFQ--PGKTEKPELTRTPSKISSIFCGTQDK 103
Query: 144 CVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
C AC+KTVYP EK+ ++G +HK CFRC HGGC ++ S+Y + + LY
Sbjct: 104 CAACEKTVYPLEKIQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLY 151
Score = 60 bits (143), Expect = 3e-010
Identities = 25/55 (45%), Positives = 34/55 (61%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GT +KC C KTVY + + ++G YHK+CFRCTH + SNY + + LY
Sbjct: 3 FTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLY 57
>TAIR9_protein||AT3G55770.6 | Symbols: | LIM domain-containing protein |
chr3:20703799-20704614 FORWARD
Length = 128
Score = 91 bits (225), Expect = 9e-020
Identities = 45/79 (56%), Positives = 58/79 (73%), Gaps = 4/79 (5%)
Frame = -1
Query: 324 LSNYSSFEGVLYCKPHFDQLFKMTGSLDKSFEGNPKTVRDRSADQVN---SKVSSMFAGT 154
LS+YSS EGVLYCKPHF+QLFK +GS +K+F+ +P D+S ++ S+V+ F+GT
Sbjct: 46 LSSYSSMEGVLYCKPHFEQLFKESGSFNKNFQ-SPAKSADKSTPELTRTPSRVAGRFSGT 104
Query: 153 QEKCVACKKTVYPTEKVGV 97
QEKC C KTVYP EKV V
Sbjct: 105 QEKCATCSKTVYPIEKVYV 123
Score = 65 bits (156), Expect = 9e-012
Identities = 28/55 (50%), Positives = 36/55 (65%)
Frame = -1
Query: 165 FAGTQEKCVACKKTVYPTEKVGVDGTSYHKACFRCTHGGCVISPSNYVAHEHRLY 1
F GTQ+KC AC+KTVY E + DG YHK+CF+CTH + S+Y + E LY
Sbjct: 3 FTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLY 57
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,105,696,823
Number of Sequences: 33410
Number of Extensions: 2105696823
Number of Successful Extensions: 109133230
Number of sequences better than 0.0: 0
|