BLASTX 7.6.2
Query= RU09750 /QuerySize=310
(309 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G55850.1 | Symbols: NOI | NOI | chr5:22603617-... 62 4e-011
TAIR9_protein||AT2G04410.1 | Symbols: | FUNCTIONS IN: molecular... 60 2e-010
TAIR9_protein||AT5G55850.2 | Symbols: NOI | NOI | chr5:22603617-... 59 5e-010
TAIR9_protein||AT5G63270.1 | Symbols: | nitrate-responsive NOI ... 55 7e-009
TAIR9_protein||AT5G40645.1 | Symbols: | nitrate-responsive NOI ... 55 9e-009
TAIR9_protein||AT2G17660.1 | Symbols: | nitrate-responsive NOI ... 53 3e-008
TAIR9_protein||AT4G35655.1 | Symbols: | FUNCTIONS IN: molecular... 53 3e-008
TAIR9_protein||AT3G48450.1 | Symbols: | nitrate-responsive NOI ... 47 1e-006
>TAIR9_protein||AT5G55850.1 | Symbols: NOI | NOI | chr5:22603617-22604951
FORWARD
Length = 115
Score = 62 bits (150), Expect = 4e-011
Identities = 27/29 (93%), Positives = 28/29 (96%)
Frame = +2
Query: 95 MSEKGRPLPKFGEWDVNDPASAEGFTVYF 181
MS+KGRPLPKFGEWDVNDPASAEGFTV F
Sbjct: 1 MSDKGRPLPKFGEWDVNDPASAEGFTVIF 29
Score = 54 bits (127), Expect = 2e-008
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +3
Query: 162 KGLLCIFNKARDEKKTGGKPESPTKAAQNNVRP-GVDPSRP-PSKK 293
+G IFNKARDEKKTGGKP SP K+++ +V+ G DPS+P P KK
Sbjct: 23 EGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPVKK 68
>TAIR9_protein||AT2G04410.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN: plasma
membrane; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Defence response, Rin4
(InterPro:IPR008700); BEST Arabidopsis thaliana protein match is: NOI
(TAIR:AT5G55850.1); Has 141 Blast hits to 140 proteins in 13 species:
Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 139; Viruses
- 0; Other Eukaryotes - 2 (source: NCBI BLink). | chr2:1534012-1535040
REVERSE
Length = 74
Score = 60 bits (144), Expect = 2e-010
Identities = 25/29 (86%), Positives = 28/29 (96%)
Frame = +2
Query: 95 MSEKGRPLPKFGEWDVNDPASAEGFTVYF 181
M++KGRPLPKFGEWDVNDP+SAEGFTV F
Sbjct: 1 MADKGRPLPKFGEWDVNDPSSAEGFTVIF 29
Score = 50 bits (117), Expect = 3e-007
Identities = 24/49 (48%), Positives = 31/49 (63%), Gaps = 1/49 (2%)
Frame = +3
Query: 162 KGLLCIFNKARDEKKTGGKPESPTKAAQNNVRPGVDPSRPPSKKWFCCM 308
+G IFNKAR+EKK GGK +SP K + G + P+KKWFCC+
Sbjct: 23 EGFTVIFNKARNEKKGGGKSDSPGKDEPGYNKNG-EVLEKPAKKWFCCI 70
>TAIR9_protein||AT5G55850.2 | Symbols: NOI | NOI | chr5:22603617-22604951
FORWARD
Length = 131
Score = 59 bits (141), Expect = 5e-010
Identities = 25/27 (92%), Positives = 26/27 (96%)
Frame = +2
Query: 101 EKGRPLPKFGEWDVNDPASAEGFTVYF 181
+KGRPLPKFGEWDVNDPASAEGFTV F
Sbjct: 19 DKGRPLPKFGEWDVNDPASAEGFTVIF 45
Score = 54 bits (127), Expect = 2e-008
Identities = 28/46 (60%), Positives = 35/46 (76%), Gaps = 2/46 (4%)
Frame = +3
Query: 162 KGLLCIFNKARDEKKTGGKPESPTKAAQNNVRP-GVDPSRP-PSKK 293
+G IFNKARDEKKTGGKP SP K+++ +V+ G DPS+P P KK
Sbjct: 39 EGFTVIFNKARDEKKTGGKPGSPGKSSEGHVKSGGGDPSKPQPVKK 84
>TAIR9_protein||AT5G63270.1 | Symbols: | nitrate-responsive NOI protein,
putative | chr5:25365498-25365949 REVERSE
Length = 81
Score = 55 bits (131), Expect = 7e-009
Identities = 23/26 (88%), Positives = 25/26 (96%)
Frame = +2
Query: 104 KGRPLPKFGEWDVNDPASAEGFTVYF 181
KG+PLPKFGEWDVN+PASAEGFTV F
Sbjct: 5 KGKPLPKFGEWDVNNPASAEGFTVIF 30
>TAIR9_protein||AT5G40645.1 | Symbols: | nitrate-responsive NOI protein,
putative | chr5:16280410-16280883 REVERSE
Length = 74
Score = 55 bits (130), Expect = 9e-009
Identities = 23/27 (85%), Positives = 25/27 (92%)
Frame = +2
Query: 101 EKGRPLPKFGEWDVNDPASAEGFTVYF 181
++ RPLPKFGEWDVNDPASAEGFTV F
Sbjct: 10 QQDRPLPKFGEWDVNDPASAEGFTVIF 36
>TAIR9_protein||AT2G17660.1 | Symbols: | nitrate-responsive NOI protein,
putative | chr2:7673359-7673568 FORWARD
Length = 70
Score = 53 bits (125), Expect = 3e-008
Identities = 22/28 (78%), Positives = 25/28 (89%)
Frame = +2
Query: 98 SEKGRPLPKFGEWDVNDPASAEGFTVYF 181
+E GR LPKFGEWDVNDPA+A+GFTV F
Sbjct: 4 NEAGRALPKFGEWDVNDPATADGFTVIF 31
>TAIR9_protein||AT4G35655.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; CONTAINS InterPro DOMAIN/s: Defence
response, Rin4 (InterPro:IPR008700); BEST Arabidopsis thaliana protein
match is: nitrate-responsive NOI protein, putative (TAIR:AT2G17660.1);
Has 135 Blast hits to 134 proteins in 12 species: Archae - 0; Bacteria
- 0; Metazoa - 0; Fungi - 0; Plants - 135; Viruses - 0; Other
Eukaryotes - 0 (source: NCBI BLink). | chr4:16910755-16910961 FORWARD
Length = 69
Score = 53 bits (125), Expect = 3e-008
Identities = 22/24 (91%), Positives = 23/24 (95%)
Frame = +2
Query: 110 RPLPKFGEWDVNDPASAEGFTVYF 181
RPLPKFGEWDVNDPA+AEGFTV F
Sbjct: 8 RPLPKFGEWDVNDPATAEGFTVIF 31
>TAIR9_protein||AT3G48450.1 | Symbols: | nitrate-responsive NOI protein,
putative | chr3:17944232-17944788 REVERSE
Length = 90
Score = 47 bits (111), Expect = 1e-006
Identities = 19/26 (73%), Positives = 21/26 (80%)
Frame = +2
Query: 104 KGRPLPKFGEWDVNDPASAEGFTVYF 181
+ RPLPKFGEWD +P SAEGFTV F
Sbjct: 6 RARPLPKFGEWDATNPGSAEGFTVIF 31
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,105,696,823
Number of Sequences: 33410
Number of Extensions: 2105696823
Number of Successful Extensions: 109133230
Number of sequences better than 0.0: 0
|