BLASTX 7.6.2
Query= RU10055 /QuerySize=503
(502 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G46210.1 | Symbols: CUL4, ATCUL4 | CUL4 (CULLI... 83 9e-017
>TAIR9_protein||AT5G46210.1 | Symbols: CUL4, ATCUL4 | CUL4 (CULLIN4); protein
binding / ubiquitin-protein ligase | chr5:18731569-18736653 REVERSE
Length = 793
Score = 83 bits (203), Expect = 9e-017
Identities = 58/132 (43%), Positives = 65/132 (49%), Gaps = 5/132 (3%)
Frame = +3
Query: 111 SHPNKRXXXXXXXXXXXXXXXXPPPMKKAKS--HSQPDTKNGLHHHTHSDNDDDGRRAQP 284
S P KR PPMKKAK+ H P N ++D A
Sbjct: 2 SLPTKRSTFSAASASDDSSYSS-PPMKKAKNDLHHSPQHPNTADKVVGFHMEEDPTPAAA 60
Query: 285 DNLSRXXXXXXXXXXXXFVIKPFKAKPAVPKNLEEETWEILKSAICAIFLKKPVSCVLED 464
NLSR FVIK KAKP +P N EE TWE L+SAI AIFLKK +S LE
Sbjct: 61 -NLSR-KKATLPQPTKKFVIKLNKAKPTLPTNFEENTWEKLQSAIRAIFLKKKISFDLES 118
Query: 465 LYQAVYNLCVHK 500
LYQAV NLC+HK
Sbjct: 119 LYQAVDNLCLHK 130
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,134,724,694
Number of Sequences: 33410
Number of Extensions: 2134724694
Number of Successful Extensions: 109177873
Number of sequences better than 0.0: 0
|