BLASTX 7.6.2
Query= RU10475 /QuerySize=578
(577 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G24190.1 | Symbols: SIN3, ATSIN3, SNL3 | SNL3 ... 190 9e-049
TAIR9_protein||AT1G70060.1 | Symbols: SNL4 | SNL4 (SIN3-LIKE 4) ... 177 5e-045
TAIR9_protein||AT1G59890.1 | Symbols: SNL5 | SNL5 (SIN3-LIKE 5) ... 168 3e-042
TAIR9_protein||AT3G01320.1 | Symbols: SNL1 | SNL1 (SIN3-LIKE 1) ... 165 2e-041
TAIR9_protein||AT5G15020.1 | Symbols: SNL2 | SNL2 (SIN3-LIKE 2) ... 164 4e-041
TAIR9_protein||AT1G10450.1 | Symbols: SNL6 | SNL6 (SIN3-LIKE 6) ... 164 5e-041
>TAIR9_protein||AT1G24190.1 | Symbols: SIN3, ATSIN3, SNL3 | SNL3 (SIN3-LIKE 3);
transcription repressor | chr1:8563858-8569996 REVERSE
Length = 1354
Score = 190 bits (480), Expect = 9e-049
Identities = 91/130 (70%), Positives = 106/130 (81%)
Frame = -3
Query: 566 LLAKEQNLGLKY*NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 387
+ +++ +G NDHWVSVTSGSEDYSF HMRKNQYEESLF+CEDDRFELDMLLESVN
Sbjct: 468 IASQKTEIGKLVLNDHWVSVTSGSEDYSFSHMRKNQYEESLFKCEDDRFELDMLLESVNS 527
Query: 386 TTKRVEELLEKINNNTIKTESPIRVEEYFTALNLRCVERLYGDHGLDVMDVLRKKCSTSF 207
TTK VEELL KIN+N +KT SPIRVE++ TALNLRC+ERLYGDHGLDVMDVL+K S +
Sbjct: 528 TTKHVEELLTKINSNELKTNSPIRVEDHLTALNLRCIERLYGDHGLDVMDVLKKNVSLAL 587
Query: 206 ACYINALEAK 177
+ L+ K
Sbjct: 588 PVILTRLKQK 597
Score = 138 bits (346), Expect = 3e-033
Identities = 66/75 (88%), Positives = 71/75 (94%)
Frame = -1
Query: 226 KNAPLALPVILTRLKQKQEEWARCRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDSKSLS 47
KN LALPVILTRLKQKQEEWARCRSDF+KVWA+IYAKNY+KSLDHRSFYFKQQDSK LS
Sbjct: 581 KNVSLALPVILTRLKQKQEEWARCRSDFDKVWAEIYAKNYYKSLDHRSFYFKQQDSKKLS 640
Query: 46 TKALLAEIKEMSEKK 2
KALLAEIKE++EKK
Sbjct: 641 MKALLAEIKEITEKK 655
>TAIR9_protein||AT1G70060.1 | Symbols: SNL4 | SNL4 (SIN3-LIKE 4) |
chr1:26383789-26389568 FORWARD
Length = 1363
Score = 177 bits (448), Expect = 5e-045
Identities = 83/130 (63%), Positives = 104/130 (80%)
Frame = -3
Query: 566 LLAKEQNLGLKY*NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 387
+ +++ +G + NDHWVSVTSGSEDYSFKHMRKNQYEESLF+CEDDRFELDMLLESV
Sbjct: 483 IASQKMEIGSQVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFKCEDDRFELDMLLESVIS 542
Query: 386 TTKRVEELLEKINNNTIKTESPIRVEEYFTALNLRCVERLYGDHGLDVMDVLRKKCSTSF 207
T RVEELL KIN+N +KT++PI +E++ TALNLRC+ERLY DHGLDV+D+L+K +
Sbjct: 543 ATNRVEELLAKINSNELKTDTPICIEDHLTALNLRCIERLYSDHGLDVLDLLKKNAYLAL 602
Query: 206 ACYINALEAK 177
+ L+ K
Sbjct: 603 PVILTRLKQK 612
Score = 143 bits (359), Expect = 1e-034
Identities = 68/75 (90%), Positives = 73/75 (97%)
Frame = -1
Query: 226 KNAPLALPVILTRLKQKQEEWARCRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDSKSLS 47
KNA LALPVILTRLKQKQEEWARCR++FNKVWADIY KNYH+SLDHRSFYFKQQDSK+LS
Sbjct: 596 KNAYLALPVILTRLKQKQEEWARCRTEFNKVWADIYTKNYHRSLDHRSFYFKQQDSKNLS 655
Query: 46 TKALLAEIKEMSEKK 2
TKALLAEIKE+SEKK
Sbjct: 656 TKALLAEIKEISEKK 670
>TAIR9_protein||AT1G59890.1 | Symbols: SNL5 | SNL5 (SIN3-LIKE 5) |
chr1:22044326-22050670 FORWARD
Length = 1160
Score = 168 bits (424), Expect = 3e-042
Identities = 84/124 (67%), Positives = 97/124 (78%), Gaps = 3/124 (2%)
Frame = -3
Query: 548 NLGLKY*NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVE 369
+LG K NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESV+ KRVE
Sbjct: 340 SLGEKVLNDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVSAAIKRVE 399
Query: 368 ELLEKINNNTIKTESPIRVEEYFTALNLRCVERLYGDHGLDVMDVLRKKCSTSFACYINA 189
LLEKINNNTI E+PI + E+ L+ +C+ERLYGD+GLDVMD L+K + +
Sbjct: 400 SLLEKINNNTISIETPICIREH---LSGKCIERLYGDYGLDVMDFLKKNSHIALPVILTR 456
Query: 188 LEAK 177
L+ K
Sbjct: 457 LKQK 460
Score = 134 bits (337), Expect = 3e-032
Identities = 61/75 (81%), Positives = 72/75 (96%)
Frame = -1
Query: 226 KNAPLALPVILTRLKQKQEEWARCRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDSKSLS 47
KN+ +ALPVILTRLKQKQEEWARCR+DF KVWA++YAKN+HKSLDHRSFYFKQQDSK+LS
Sbjct: 444 KNSHIALPVILTRLKQKQEEWARCRADFRKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLS 503
Query: 46 TKALLAEIKEMSEKK 2
TK L+AEIK++SE+K
Sbjct: 504 TKGLVAEIKDISERK 518
>TAIR9_protein||AT3G01320.1 | Symbols: SNL1 | SNL1 (SIN3-LIKE 1) |
chr3:106730-113197 FORWARD
Length = 1373
Score = 165 bits (416), Expect = 2e-041
Identities = 78/130 (60%), Positives = 95/130 (73%)
Frame = -3
Query: 566 LLAKEQNLGLKY*NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNV 387
+ ++ LG + NDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV+
Sbjct: 486 IASQRSELGAEVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVSS 545
Query: 386 TTKRVEELLEKINNNTIKTESPIRVEEYFTALNLRCVERLYGDHGLDVMDVLRKKCSTSF 207
+ E LL I I R+E++FTALNLRC+ERLYGDHGLDV+D+L K +T+
Sbjct: 546 AARSAESLLNIITEKKISFSGSFRIEDHFTALNLRCIERLYGDHGLDVIDILNKNPATAL 605
Query: 206 ACYINALEAK 177
+ L+ K
Sbjct: 606 PVILTRLKQK 615
Score = 123 bits (308), Expect = 8e-029
Identities = 57/74 (77%), Positives = 66/74 (89%)
Frame = -1
Query: 226 KNAPLALPVILTRLKQKQEEWARCRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDSKSLS 47
KN ALPVILTRLKQKQ EW +CR DF+KVWA++YAKN++KSLDHRSFYFKQQDSK+LS
Sbjct: 599 KNPATALPVILTRLKQKQGEWKKCRDDFDKVWANVYAKNHYKSLDHRSFYFKQQDSKNLS 658
Query: 46 TKALLAEIKEMSEK 5
K+LLAEIKE+ EK
Sbjct: 659 AKSLLAEIKELKEK 672
>TAIR9_protein||AT5G15020.1 | Symbols: SNL2 | SNL2 (SIN3-LIKE 2) |
chr5:4859408-4865569 REVERSE
Length = 1368
Score = 164 bits (414), Expect = 4e-041
Identities = 80/125 (64%), Positives = 92/125 (73%)
Frame = -3
Query: 551 QNLGLKY*NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRV 372
Q G NDHWVSVTSGSEDYSFKHMR+NQYEESLFRCEDDRFELDMLLESV K
Sbjct: 486 QKSGAAVLNDHWVSVTSGSEDYSFKHMRRNQYEESLFRCEDDRFELDMLLESVGSAAKSA 545
Query: 371 EELLEKINNNTIKTESPIRVEEYFTALNLRCVERLYGDHGLDVMDVLRKKCSTSFACYIN 192
EELL I + I E R+E++FTALNLRC+ERLYGDHGLDV D++RK + + +
Sbjct: 546 EELLNIIIDKKISFEGSFRIEDHFTALNLRCIERLYGDHGLDVTDLIRKNPAAALPVILT 605
Query: 191 ALEAK 177
L+ K
Sbjct: 606 RLKQK 610
Score = 121 bits (302), Expect = 4e-028
Identities = 54/74 (72%), Positives = 65/74 (87%)
Frame = -1
Query: 226 KNAPLALPVILTRLKQKQEEWARCRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDSKSLS 47
KN ALPVILTRLKQKQ+EW +CR FN VWAD+YAKN++KSLDHRSFYFKQQDSK+LS
Sbjct: 594 KNPAAALPVILTRLKQKQDEWTKCREGFNVVWADVYAKNHYKSLDHRSFYFKQQDSKNLS 653
Query: 46 TKALLAEIKEMSEK 5
KAL++E+K++ EK
Sbjct: 654 AKALVSEVKDLKEK 667
>TAIR9_protein||AT1G10450.1 | Symbols: SNL6 | SNL6 (SIN3-LIKE 6) |
chr1:3432160-3437979 FORWARD
Length = 1174
Score = 164 bits (413), Expect = 5e-041
Identities = 81/136 (59%), Positives = 102/136 (75%)
Frame = -3
Query: 545 LGLKY*NDHWVSVTSGSEDYSFKHMRKNQYEESLFRCEDDRFELDMLLESVNVTTKRVEE 366
LG K NDH VSVTSGSEDYSF HMRKNQYEESLFRCEDDR+E+DMLL SV+ K+VE
Sbjct: 375 LGKKTLNDHLVSVTSGSEDYSFSHMRKNQYEESLFRCEDDRYEMDMLLGSVSSAIKQVEI 434
Query: 365 LLEKINNNTIKTESPIRVEEYFTALNLRCVERLYGDHGLDVMDVLRKKCSTSFACYINAL 186
LLEK+NNNTI +S I +E++ +A+NLRC+ERLYGD+GLDVMD+L+K ++ + L
Sbjct: 435 LLEKMNNNTISVDSTICIEKHLSAMNLRCIERLYGDNGLDVMDLLKKNMHSALPVILTRL 494
Query: 185 EAKARRVGKVSL*FQQ 138
+ K + FQ+
Sbjct: 495 KQKQEEWARCHSDFQK 510
Score = 132 bits (331), Expect = 2e-031
Identities = 61/75 (81%), Positives = 69/75 (92%)
Frame = -1
Query: 226 KNAPLALPVILTRLKQKQEEWARCRSDFNKVWADIYAKNYHKSLDHRSFYFKQQDSKSLS 47
KN ALPVILTRLKQKQEEWARC SDF KVWA++YAKN+HKSLDHRSFYFKQQDSK+LS
Sbjct: 481 KNMHSALPVILTRLKQKQEEWARCHSDFQKVWAEVYAKNHHKSLDHRSFYFKQQDSKNLS 540
Query: 46 TKALLAEIKEMSEKK 2
TK L+AE+K++SEKK
Sbjct: 541 TKCLVAEVKDISEKK 555
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,193,747,007
Number of Sequences: 33410
Number of Extensions: 2193747007
Number of Successful Extensions: 114331788
Number of sequences better than 0.0: 0
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