BLASTX 7.6.2
Query= RU10890 /QuerySize=254
(253 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G40030.1 | Symbols: | histone H3.2 | chr4:185... 100 3e-022
TAIR9_protein||AT4G40040.1 | Symbols: | histone H3.2 | chr4:185... 100 3e-022
TAIR9_protein||AT4G40040.2 | Symbols: | histone H3.2 | chr4:185... 100 3e-022
TAIR9_protein||AT4G40030.2 | Symbols: | histone H3.2 | chr4:185... 100 3e-022
TAIR9_protein||AT4G40030.3 | Symbols: | histone H3.2 | chr4:185... 100 3e-022
TAIR9_protein||AT5G10980.1 | Symbols: | histone H3 | chr5:34725... 100 3e-022
TAIR9_protein||AT1G09200.1 | Symbols: | histone H3 | chr1:29717... 96 3e-021
TAIR9_protein||AT3G27360.1 | Symbols: | histone H3 | chr3:10129... 96 3e-021
TAIR9_protein||AT5G10390.1 | Symbols: | histone H3 | chr5:32690... 96 3e-021
TAIR9_protein||AT5G10400.1 | Symbols: | histone H3 | chr5:32704... 96 3e-021
TAIR9_protein||AT5G65360.1 | Symbols: | histone H3 | chr5:26120... 96 3e-021
TAIR9_protein||AT1G13370.1 | Symbols: | histone H3, putative | ... 93 2e-020
TAIR9_protein||AT1G75600.1 | Symbols: | histone H3.2, putative ... 92 5e-020
TAIR9_protein||AT5G65350.1 | Symbols: | histone H3 | chr5:26119... 89 3e-019
TAIR9_protein||AT1G19890.1 | Symbols: ATMGH3, MGH3 | MGH3 (MALE-... 79 6e-016
TAIR9_protein||AT5G12910.1 | Symbols: | histone H3, putative | ... 54 1e-008
>TAIR9_protein||AT4G40030.1 | Symbols: | histone H3.2 | chr4:18555840-18556417
REVERSE
Length = 137
Score = 100 bits (247), Expect = 3e-022
Identities = 48/48 (100%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 57
>TAIR9_protein||AT4G40040.1 | Symbols: | histone H3.2 | chr4:18557539-18558236
REVERSE
Length = 137
Score = 100 bits (247), Expect = 3e-022
Identities = 48/48 (100%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 57
>TAIR9_protein||AT4G40040.2 | Symbols: | histone H3.2 | chr4:18557539-18558236
REVERSE
Length = 137
Score = 100 bits (247), Expect = 3e-022
Identities = 48/48 (100%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 57
>TAIR9_protein||AT4G40030.2 | Symbols: | histone H3.2 | chr4:18555840-18556827
REVERSE
Length = 165
Score = 100 bits (247), Expect = 3e-022
Identities = 48/48 (100%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 38 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 85
>TAIR9_protein||AT4G40030.3 | Symbols: | histone H3.2 | chr4:18555840-18556417
REVERSE
Length = 137
Score = 100 bits (247), Expect = 3e-022
Identities = 48/48 (100%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 57
>TAIR9_protein||AT5G10980.1 | Symbols: | histone H3 | chr5:3472591-3473349
REVERSE
Length = 137
Score = 100 bits (247), Expect = 3e-022
Identities = 48/48 (100%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 57
>TAIR9_protein||AT1G09200.1 | Symbols: | histone H3 | chr1:2971722-2972132
REVERSE
Length = 137
Score = 96 bits (238), Expect = 3e-021
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQK 57
>TAIR9_protein||AT3G27360.1 | Symbols: | histone H3 | chr3:10129459-10129869
REVERSE
Length = 137
Score = 96 bits (238), Expect = 3e-021
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQK 57
>TAIR9_protein||AT5G10390.1 | Symbols: | histone H3 | chr5:3269065-3269475
REVERSE
Length = 137
Score = 96 bits (238), Expect = 3e-021
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQK 57
>TAIR9_protein||AT5G10400.1 | Symbols: | histone H3 | chr5:3270478-3270888
REVERSE
Length = 137
Score = 96 bits (238), Expect = 3e-021
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQK 57
>TAIR9_protein||AT5G65360.1 | Symbols: | histone H3 | chr5:26120099-26120509
REVERSE
Length = 137
Score = 96 bits (238), Expect = 3e-021
Identities = 46/48 (95%), Positives = 47/48 (97%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGKAPRKQLATKAARKSAP TGGVKKPHR+RPGTVALREIRKYQK
Sbjct: 10 KSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQK 57
>TAIR9_protein||AT1G13370.1 | Symbols: | histone H3, putative |
chr1:4587926-4588522 REVERSE
Length = 137
Score = 93 bits (230), Expect = 2e-020
Identities = 45/48 (93%), Positives = 46/48 (95%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KS GGKAP KQLATKAARKSAPTTGGVKKPHR+RPGTVALREIRKYQK
Sbjct: 10 KSHGGKAPTKQLATKAARKSAPTTGGVKKPHRFRPGTVALREIRKYQK 57
>TAIR9_protein||AT1G75600.1 | Symbols: | histone H3.2, putative |
chr1:28390753-28391461 FORWARD
Length = 137
Score = 92 bits (227), Expect = 5e-020
Identities = 45/48 (93%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
KS GGKAPR LATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK
Sbjct: 10 KSHGGKAPRTLLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 57
>TAIR9_protein||AT5G65350.1 | Symbols: | histone H3 | chr5:26119406-26119825
REVERSE
Length = 140
Score = 89 bits (220), Expect = 3e-019
Identities = 42/47 (89%), Positives = 45/47 (95%)
Frame = +3
Query: 111 STGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
STGGKAPRKQLA KAAR+SAP TGGVKKPHR+RPGTVALR+IRKYQK
Sbjct: 11 STGGKAPRKQLAPKAARQSAPATGGVKKPHRFRPGTVALRDIRKYQK 57
>TAIR9_protein||AT1G19890.1 | Symbols: ATMGH3, MGH3 | MGH3 (MALE-GAMETE-SPECIFIC
HISTONE H3); DNA binding | chr1:6905034-6905792 FORWARD
Length = 138
Score = 79 bits (192), Expect = 6e-016
Identities = 39/49 (79%), Positives = 43/49 (87%), Gaps = 1/49 (2%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKS-APTTGGVKKPHRYRPGTVALREIRKYQK 251
KSTGGK PRK+LATKAARK+ P GGVK+ HR+RPGTVALREIRKYQK
Sbjct: 10 KSTGGKGPRKELATKAARKTRRPYRGGVKRAHRFRPGTVALREIRKYQK 58
>TAIR9_protein||AT5G12910.1 | Symbols: | histone H3, putative |
chr5:4077162-4077557 FORWARD
Length = 132
Score = 54 bits (129), Expect = 1e-008
Identities = 29/48 (60%), Positives = 35/48 (72%), Gaps = 5/48 (10%)
Frame = +3
Query: 108 KSTGGKAPRKQLATKAARKSAPTTGGVKKPHRYRPGTVALREIRKYQK 251
K+TGGKAP A + + S P +KKP+RY+PGTVALREIRKYQK
Sbjct: 10 KATGGKAP--HFAMRVWQHSTPP---LKKPYRYKPGTVALREIRKYQK 52
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,252,006,599
Number of Sequences: 33410
Number of Extensions: 2252006599
Number of Successful Extensions: 119374135
Number of sequences better than 0.0: 0
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