BLASTX 7.6.2
Query= RU11562 /QuerySize=284
(283 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G21060.1 | Symbols: ATGRP2B | ATGRP2B (GLYCINE... 89 6e-019
TAIR9_protein||AT4G38680.1 | Symbols: GRP2, CSDP2, CSP2, ATCSP2 ... 87 2e-018
TAIR9_protein||AT2G17870.1 | Symbols: | cold-shock DNA-binding ... 76 3e-015
TAIR9_protein||AT4G36020.1 | Symbols: CSDP1 | CSDP1 (cold shock ... 71 1e-013
>TAIR9_protein||AT2G21060.1 | Symbols: ATGRP2B | ATGRP2B (GLYCINE-RICH PROTEIN
2B); DNA binding / nucleic acid binding / zinc ion binding |
chr2:9036983-9037588 REVERSE
Length = 202
Score = 89 bits (218), Expect = 6e-019
Identities = 40/54 (74%), Positives = 47/54 (87%)
Frame = -3
Query: 167 ERLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQIE 6
+R GTVKWF+ QKGFGFITP+DGG+DLFVHQSSIR+EGFR+L ESVEF +E
Sbjct: 13 DRRKGTVKWFDTQKGFGFITPSDGGDDLFVHQSSIRSEGFRSLAAEESVEFDVE 66
>TAIR9_protein||AT4G38680.1 | Symbols: GRP2, CSDP2, CSP2, ATCSP2 | GRP2 (GLYCINE
RICH PROTEIN 2); double-stranded DNA binding / mRNA binding / nucleic
acid binding / single-stranded DNA binding | chr4:18072240-18072851
REVERSE
Length = 204
Score = 87 bits (213), Expect = 2e-018
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = -3
Query: 167 ERLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQIE 6
ER G+VKWF+ QKGFGFITP DGG+DLFVHQSSIR+EGFR+L E+VEF++E
Sbjct: 9 ERRKGSVKWFDTQKGFGFITPDDGGDDLFVHQSSIRSEGFRSLAAEEAVEFEVE 62
>TAIR9_protein||AT2G17870.1 | Symbols: | cold-shock DNA-binding family protein
| chr2:7764276-7765181 REVERSE
Length = 302
Score = 76 bits (186), Expect = 3e-015
Identities = 35/52 (67%), Positives = 43/52 (82%)
Frame = -3
Query: 164 RLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQI 9
R G V WF+D KG+GFITP DGGE+LFVHQSSI ++GFR+L GESVE++I
Sbjct: 10 RSIGKVSWFSDGKGYGFITPDDGGEELFVHQSSIVSDGFRSLTLGESVEYEI 61
>TAIR9_protein||AT4G36020.1 | Symbols: CSDP1 | CSDP1 (cold shock domain protein
1); RNA binding / double-stranded DNA binding / nucleic acid binding /
single-stranded DNA binding | chr4:17043443-17044342 REVERSE
Length = 300
Score = 71 bits (173), Expect = 1e-013
Identities = 33/52 (63%), Positives = 40/52 (76%)
Frame = -3
Query: 164 RLTGTVKWFNDQKGFGFITPADGGEDLFVHQSSIRTEGFRTLGDGESVEFQI 9
R TG V WFN KG+GFITP DG +LFVHQSSI +EG+R+L G++VEF I
Sbjct: 10 RSTGKVNWFNASKGYGFITPDDGSVELFVHQSSIVSEGYRSLTVGDAVEFAI 61
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,374,074,516
Number of Sequences: 33410
Number of Extensions: 2374074516
Number of Successful Extensions: 130064265
Number of sequences better than 0.0: 0
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