BLASTX 7.6.2
Query= RU11737 /QuerySize=281
(280 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1... 139 4e-034
TAIR9_protein||AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQU... 56 3e-009
TAIR9_protein||AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQU... 56 3e-009
TAIR9_protein||AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2 (UBI... 56 3e-009
TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-con... 53 3e-008
>TAIR9_protein||AT3G57870.1 | Symbols: AHUS5, EMB1637, SCE1, SCE1A, ATSCE1 |
SCE1 (SUMO CONJUGATION ENZYME 1); SUMO ligase | chr3:21428831-21430110
REVERSE
Length = 161
Score = 139 bits (349), Expect = 4e-034
Identities = 61/73 (83%), Positives = 65/73 (89%)
Frame = +3
Query: 51 MSGGIARGRLAEERKSWRKNHPHGFVAKPETGADGSVNLMVWQCLIPGKPATDWEGGNYP 230
M+ GIARGRLAEERKSWRKNHPHGFVAKPETG DG+VNLMVW C IPGK TDWEGG +P
Sbjct: 1 MASGIARGRLAEERKSWRKNHPHGFVAKPETGQDGTVNLMVWHCTIPGKAGTDWEGGFFP 60
Query: 231 LTLQFSEDYPSKP 269
LT+ FSEDYPSKP
Sbjct: 61 LTMHFSEDYPSKP 73
>TAIR9_protein||AT1G14400.1 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase | chr1:4927294-4928136 REVERSE
Length = 153
Score = 56 bits (134), Expect = 3e-009
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Frame = +3
Query: 69 RGRLAEERKSWRKNHPHGFVAKPETGADGSVNLMVWQCLIPGKPATDWEGGNYPLTLQFS 248
R RL + K +++ P G +GA N+M+W +I G T W+GG + L+LQFS
Sbjct: 6 RKRLMRDFKRLQQDPPAGI-----SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 249 EDYPSKP 269
EDYP+KP
Sbjct: 61 EDYPNKP 67
>TAIR9_protein||AT1G14400.2 | Symbols: UBC1, ATUBC1 | UBC1 (UBIQUITIN CARRIER
PROTEIN 1); ubiquitin-protein ligase | chr1:4927294-4928136 REVERSE
Length = 153
Score = 56 bits (134), Expect = 3e-009
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Frame = +3
Query: 69 RGRLAEERKSWRKNHPHGFVAKPETGADGSVNLMVWQCLIPGKPATDWEGGNYPLTLQFS 248
R RL + K +++ P G +GA N+M+W +I G T W+GG + L+LQFS
Sbjct: 6 RKRLMRDFKRLQQDPPAGI-----SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 249 EDYPSKP 269
EDYP+KP
Sbjct: 61 EDYPNKP 67
>TAIR9_protein||AT2G02760.1 | Symbols: ATUBC2, UBC2 | ATUBC2
(UBIQUITING-CONJUGATING ENZYME 2); ubiquitin-protein ligase |
chr2:774271-775149 FORWARD
Length = 153
Score = 56 bits (134), Expect = 3e-009
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 5/67 (7%)
Frame = +3
Query: 69 RGRLAEERKSWRKNHPHGFVAKPETGADGSVNLMVWQCLIPGKPATDWEGGNYPLTLQFS 248
R RL + K +++ P G +GA N+M+W +I G T W+GG + L+LQFS
Sbjct: 6 RKRLMRDFKRLQQDPPAGI-----SGAPQDNNIMLWNAVIFGPDDTPWDGGTFKLSLQFS 60
Query: 249 EDYPSKP 269
EDYP+KP
Sbjct: 61 EDYPNKP 67
>TAIR9_protein||AT5G62540.1 | Symbols: UBC3 | UBC3 (ubiquitin-conjugating enzyme
3); ubiquitin-protein ligase | chr5:25104679-25105465 FORWARD
Length = 151
Score = 53 bits (126), Expect = 3e-008
Identities = 28/65 (43%), Positives = 37/65 (56%), Gaps = 5/65 (7%)
Frame = +3
Query: 75 RLAEERKSWRKNHPHGFVAKPETGADGSVNLMVWQCLIPGKPATDWEGGNYPLTLQFSED 254
RL + K +K+ P G +GA N+M W LI G T W+GG + LTL F+ED
Sbjct: 8 RLMWDFKRLQKDPPVGI-----SGAPQDNNIMHWNALIFGPEDTPWDGGTFKLTLHFTED 62
Query: 255 YPSKP 269
YP+KP
Sbjct: 63 YPNKP 67
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,403,403,375
Number of Sequences: 33410
Number of Extensions: 2403403375
Number of Successful Extensions: 130290479
Number of sequences better than 0.0: 0
|