BLASTX 7.6.2
Query= RU12333 /QuerySize=831
(830 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G58640.1 | Symbols: | selenoprotein-related |... 244 6e-065
TAIR9_protein||AT5G58640.2 | Symbols: | selenoprotein-related |... 240 8e-064
TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PRO... 223 1e-058
>TAIR9_protein||AT5G58640.1 | Symbols: | selenoprotein-related |
chr5:23697996-23699505 FORWARD
Length = 229
Score = 244 bits (622), Expect = 6e-065
Identities = 123/225 (54%), Positives = 155/225 (68%), Gaps = 6/225 (2%)
Frame = -1
Query: 773 MDRTQIVLLGLPLFLFCFDVLNLFTLRXXXXXXXXXXXXXXXXXXXXXXXXXPLPKDTLD 594
MDR Q++LLGLP+FLFC D+ NLFT P +TLD
Sbjct: 1 MDRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIP---ETLD 57
Query: 593 FPSQKP--MAGAVGVGNTVKISFCTSCSYKGTAVTMTKMLEAAYPGIEVVLSNYPPALPK 420
FPSQK + GA+G GNTV+I+FC SCSYKGTAVTM KMLE A+PG++V+L+NYPP PK
Sbjct: 58 FPSQKTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPK 117
Query: 419 RL.IKLVPVVQFGIFGIVMGGEQLFPMVGMV-PPPWFYSLRANRFGTPPSTWLLGNALQS 243
RL K+VPVVQ G+ G+++ G+++ PM+G+ PP WF+SLRANRFG+ STWL+GN LQS
Sbjct: 118 RLLAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQS 177
Query: 242 F.SGTGAFEVSLYDELIFSKLQEGRFPGEIELRDAIGRKLVNSGI 108
+ +GAFEV E +FSKL+EGRFPGEIELRD I + L I
Sbjct: 178 YLQSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSI 222
>TAIR9_protein||AT5G58640.2 | Symbols: | selenoprotein-related |
chr5:23697996-23699505 FORWARD
Length = 228
Score = 240 bits (612), Expect = 8e-064
Identities = 121/223 (54%), Positives = 153/223 (68%), Gaps = 5/223 (2%)
Frame = -1
Query: 770 DRTQIVLLGLPLFLFCFDVLNLFTLRXXXXXXXXXXXXXXXXXXXXXXXXXPLPKDTLDF 591
DR Q++LLGLP+FLFC D+ NLFT P +TLDF
Sbjct: 2 DRAQLILLGLPIFLFCSDLFNLFTPPPPKPQPHRPHQPPHIPHQHRPNAIIP---ETLDF 58
Query: 590 PSQ-KPMAGAVGVGNTVKISFCTSCSYKGTAVTMTKMLEAAYPGIEVVLSNYPPALPKRL 414
PSQ + GA+G GNTV+I+FC SCSYKGTAVTM KMLE A+PG++V+L+NYPP PKRL
Sbjct: 59 PSQTSGLGGAIGYGNTVEINFCVSCSYKGTAVTMKKMLETAFPGLDVILANYPPPAPKRL 118
Query: 413 .IKLVPVVQFGIFGIVMGGEQLFPMVGMV-PPPWFYSLRANRFGTPPSTWLLGNALQSF. 237
K+VPVVQ G+ G+++ G+++ PM+G+ PP WF+SLRANRFG+ STWL+GN LQS+
Sbjct: 119 LAKVVPVVQMGVIGMIVAGDRILPMIGITNPPAWFHSLRANRFGSMASTWLIGNFLQSYL 178
Query: 236 SGTGAFEVSLYDELIFSKLQEGRFPGEIELRDAIGRKLVNSGI 108
+GAFEV E +FSKL+EGRFPGEIELRD I + L I
Sbjct: 179 QSSGAFEVHCNGEPVFSKLKEGRFPGEIELRDLISKTLTRPSI 221
>TAIR9_protein||AT3G47300.1 | Symbols: SELT | SELT (SELT-LIKE PROTEIN
PRECURSOR); selenium binding | chr3:17428685-17429555 REVERSE
Length = 210
Score = 223 bits (568), Expect = 1e-058
Identities = 107/173 (61%), Positives = 134/173 (77%), Gaps = 3/173 (1%)
Frame = -1
Query: 617 PLPKDTLDFPSQKPMAGAVGVGNTVKISFCTSCSYKGTAVTMTKMLEAAYPGIEVVLSNY 438
P +TLDFP+QK + VG GNTV+I+FC SCSYKGTAV+M KMLE+ +PG++VVL+NY
Sbjct: 37 PSISETLDFPAQK--STGVGYGNTVEINFCISCSYKGTAVSMKKMLESVFPGLDVVLANY 94
Query: 437 PPALPKRL.IKLVPVVQFGIFGIVMGGEQLFPMVGMV-PPPWFYSLRANRFGTPPSTWLL 261
P PKR+ K+VPV Q G+ G++MGGEQ+FPM+G+ PP W++SLRANRFG+ STWLL
Sbjct: 95 PAPAPKRILAKVVPVAQVGVIGLIMGGEQIFPMIGIAQPPAWYHSLRANRFGSMASTWLL 154
Query: 260 GNALQSF.SGTGAFEVSLYDELIFSKLQEGRFPGEIELRDAIGRKLVNSGITG 102
GN LQSF +GAFEVS EL+FSKL+EGRFPGEIELRD I + +TG
Sbjct: 155 GNFLQSFLQSSGAFEVSCNGELVFSKLKEGRFPGEIELRDLISGTMTKPFVTG 207
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,462,713,534
Number of Sequences: 33410
Number of Extensions: 2462713534
Number of Successful Extensions: 130446801
Number of sequences better than 0.0: 0
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