BLASTX 7.6.2
Query= RU12385 /QuerySize=364
(363 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G12480.1 | Symbols: NF-YC11 | NF-YC11 (NUCLEAR... 77 2e-015
TAIR9_protein||AT5G19490.1 | Symbols: | DNA binding / sequence-... 68 7e-013
>TAIR9_protein||AT3G12480.1 | Symbols: NF-YC11 | NF-YC11 (NUCLEAR FACTOR Y,
SUBUNIT C11); DNA binding / transcription factor | chr3:3958065-3960278
FORWARD
Length = 294
Score = 77 bits (187), Expect = 2e-015
Identities = 34/42 (80%), Positives = 40/42 (95%)
Frame = -2
Query: 128 KALELFLQDLCDRTY*ITLQRGAKTMNSVHLKHCVQSYNVFD 3
K+LELFLQDLCDRTY ITL+RGAKT++S+HLKHCV+ YNVFD
Sbjct: 37 KSLELFLQDLCDRTYEITLERGAKTVSSLHLKHCVERYNVFD 78
Score = 71 bits (172), Expect = 1e-013
Identities = 36/37 (97%)
Frame = -3
Query: 235 MRKKLDTRFPAARIKKIMQADEDVSKIALAVPVLVSK 125
MRKKLDTRFPAARIKKIMQADEDV KIALAVPVLVSK
Sbjct: 1 MRKKLDTRFPAARIKKIMQADEDVGKIALAVPVLVSK 37
>TAIR9_protein||AT5G19490.1 | Symbols: | DNA binding / sequence-specific DNA
binding | chr5:6576769-6578273 REVERSE
Length = 265
Score = 68 bits (165), Expect = 7e-013
Identities = 31/42 (73%), Positives = 36/42 (85%)
Frame = -2
Query: 128 KALELFLQDLCDRTY*ITLQRGAKTMNSVHLKHCVQSYNVFD 3
KALELFLQDLC+ TY +TL RGAKT+N+ HLK CVQ+ NVFD
Sbjct: 37 KALELFLQDLCNHTYDVTLSRGAKTVNAFHLKQCVQATNVFD 78
Score = 61 bits (146), Expect = 1e-010
Identities = 29/37 (78%), Positives = 33/37 (89%)
Frame = -3
Query: 235 MRKKLDTRFPAARIKKIMQADEDVSKIALAVPVLVSK 125
M+KKL TRFPA RIKKIMQ DE+V KIA+AVP+LVSK
Sbjct: 1 MKKKLQTRFPATRIKKIMQTDEEVGKIAMAVPLLVSK 37
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,462,713,534
Number of Sequences: 33410
Number of Extensions: 2462713534
Number of Successful Extensions: 130446801
Number of sequences better than 0.0: 0
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