BLASTX 7.6.2
Query= RU12493 /QuerySize=479
(478 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type... 129 1e-030
TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 128 2e-030
TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 128 2e-030
TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 128 2e-030
TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 128 2e-030
TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type... 91 2e-019
TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type... 85 2e-017
TAIR9_protein||AT1G68190.1 | Symbols: | zinc finger (B-box type... 84 5e-017
TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type... 79 1e-015
TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type... 79 1e-015
TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type... 79 1e-015
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 72 2e-013
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 66 1e-011
TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); tr... 66 1e-011
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 65 1e-011
TAIR9_protein||AT4G15248.1 | Symbols: | zinc ion binding | chr4... 60 6e-010
TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONST... 57 5e-009
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 57 5e-009
TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type... 53 7e-008
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 53 7e-008
TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type... 52 2e-007
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 49 1e-006
TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type... 47 5e-006
TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type... 47 5e-006
TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type... 47 5e-006
>TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type) family
protein | chr5:19561719-19563113 REVERSE
Length = 374
Score = 129 bits (322), Expect = 1e-030
Identities = 55/63 (87%), Positives = 62/63 (98%)
Frame = -3
Query: 191 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
MGY+CDFCG+QRSMVYCRSDAACLCLSCDRNVHSANALS+RHSRTL+CERCN+QPA VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPASVRC 60
Query: 11 AEE 3
++E
Sbjct: 61 SDE 63
>TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 128 bits (320), Expect = 2e-030
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = -3
Query: 191 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
MGY+CDFCG+QRSMVYCRSDAACLCLSCDR+VHSANALS+RHSRTL+CERCN+QPA VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 11 AEE 3
EE
Sbjct: 61 VEE 63
>TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 128 bits (320), Expect = 2e-030
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = -3
Query: 191 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
MGY+CDFCG+QRSMVYCRSDAACLCLSCDR+VHSANALS+RHSRTL+CERCN+QPA VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 11 AEE 3
EE
Sbjct: 61 VEE 63
>TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 128 bits (320), Expect = 2e-030
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = -3
Query: 191 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
MGY+CDFCG+QRSMVYCRSDAACLCLSCDR+VHSANALS+RHSRTL+CERCN+QPA VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 11 AEE 3
EE
Sbjct: 61 VEE 63
>TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 128 bits (320), Expect = 2e-030
Identities = 55/63 (87%), Positives = 61/63 (96%)
Frame = -3
Query: 191 MGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
MGY+CDFCG+QRSMVYCRSDAACLCLSCDR+VHSANALS+RHSRTL+CERCN+QPA VRC
Sbjct: 1 MGYMCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPATVRC 60
Query: 11 AEE 3
EE
Sbjct: 61 VEE 63
>TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:8709942-8711106 REVERSE
Length = 331
Score = 91 bits (225), Expect = 2e-019
Identities = 36/59 (61%), Positives = 49/59 (83%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRCAEE 3
CDFCG +++++YC+SD+A LCL+CD NVHSAN LS+RH+R+LLCE+C+ QP V C E
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQPTAVHCMNE 63
>TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type) family
protein | chr3:7706748-7708093 FORWARD
Length = 365
Score = 85 bits (208), Expect = 2e-017
Identities = 34/59 (57%), Positives = 46/59 (77%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRCAEE 3
CD C ++++YC+SD A LCL+CD +VHSAN LS RH R+L+CE+C SQPA +RC +E
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPAAIRCLDE 63
>TAIR9_protein||AT1G68190.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25559384-25561004 FORWARD
Length = 357
Score = 84 bits (205), Expect = 5e-017
Identities = 35/61 (57%), Positives = 46/61 (75%)
Frame = -3
Query: 194 NMGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVR 15
NM +C+FC R++VYC +D A LCL+CD VHSAN+LS RH RT+LC+ C +QP +VR
Sbjct: 9 NMERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQPCVVR 68
Query: 14 C 12
C
Sbjct: 69 C 69
>TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:9775768-9777657 REVERSE
Length = 434
Score = 79 bits (193), Expect = 1e-015
Identities = 29/56 (51%), Positives = 44/56 (78%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
CDFCG++ ++++CR+D A LCL CD+ VH+AN LSR+H R+ +C+ C ++P VRC
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEPVSVRC 64
>TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 403
Score = 79 bits (193), Expect = 1e-015
Identities = 29/56 (51%), Positives = 45/56 (80%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
C+FCG++ ++++CR+D A LCL CD++VHSAN LSR+H R+ +C+ C+ +P VRC
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRC 67
>TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 402
Score = 79 bits (193), Expect = 1e-015
Identities = 29/56 (51%), Positives = 45/56 (80%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
C+FCG++ ++++CR+D A LCL CD++VHSAN LSR+H R+ +C+ C+ +P VRC
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEPVSVRC 67
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 72 bits (174), Expect = 2e-013
Identities = 33/71 (46%), Positives = 42/71 (59%)
Frame = -3
Query: 224 K*RKEFVKT*NMGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCE 45
K +K F + +CD C + +YCR DAA LCLSCD VH+AN L+ RH+R +CE
Sbjct: 35 KKKKRFRERKMASKLCDSCKSATAALYCRPDAAFLCLSCDSKVHAANKLASRHARVWMCE 94
Query: 44 RCNSQPALVRC 12
C PA V C
Sbjct: 95 VCEQAPAHVTC 105
Score = 55 bits (132), Expect = 1e-008
Identities = 21/42 (50%), Positives = 32/42 (76%)
Frame = -3
Query: 185 YICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSR 60
++C+ C + V C++DAA LC++CDR++HSAN L+RRH R
Sbjct: 91 WMCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHER 132
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 66 bits (159), Expect = 1e-011
Identities = 27/56 (48%), Positives = 33/56 (58%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
CD C VYC +D+A LC+SCD VHSAN ++ RH R +CE C PA C
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLC 75
Score = 47 bits (109), Expect = 6e-006
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -3
Query: 182 ICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSR 60
+C+ C + C +D A LC +CD VHSAN L+RRH R
Sbjct: 62 VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
>TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171873-5172697 REVERSE
Length = 275
Score = 66 bits (159), Expect = 1e-011
Identities = 27/56 (48%), Positives = 33/56 (58%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVRC 12
CD C VYC +D+A LC+SCD VHSAN ++ RH R +CE C PA C
Sbjct: 20 CDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPAAFLC 75
Score = 47 bits (109), Expect = 6e-006
Identities = 19/41 (46%), Positives = 25/41 (60%)
Frame = -3
Query: 182 ICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSR 60
+C+ C + C +D A LC +CD VHSAN L+RRH R
Sbjct: 62 VCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 65 bits (158), Expect = 1e-011
Identities = 28/61 (45%), Positives = 34/61 (55%)
Frame = -3
Query: 194 NMGYICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVR 15
N CD C VYCR+D+A LC SCD VH+AN L+ RH R +C+ C PA
Sbjct: 7 NWAQACDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPAAFF 66
Query: 14 C 12
C
Sbjct: 67 C 67
Score = 50 bits (118), Expect = 6e-007
Identities = 19/41 (46%), Positives = 27/41 (65%)
Frame = -3
Query: 182 ICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSR 60
+C C + +C++DAA LC +CD +HSAN L+RRH R
Sbjct: 54 VCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
>TAIR9_protein||AT4G15248.1 | Symbols: | zinc ion binding |
chr4:8708881-8709234 FORWARD
Length = 118
Score = 60 bits (144), Expect = 6e-010
Identities = 26/47 (55%), Positives = 33/47 (70%), Gaps = 1/47 (2%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERC 39
C+ CG + + VYC +DAA LC CDR VHSAN L+RRH R ++C C
Sbjct: 32 CELCG-ENATVYCEADAAFLCRKCDRWVHSANFLARRHLRRVICTTC 77
>TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567621 FORWARD
Length = 221
Score = 57 bits (136), Expect = 5e-009
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = -3
Query: 185 YICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSR 60
++C+ C + V C++DAA LC++CDR++HSAN LSRRH R
Sbjct: 49 WLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 57 bits (136), Expect = 5e-009
Identities = 22/42 (52%), Positives = 32/42 (76%)
Frame = -3
Query: 185 YICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSR 60
++C+ C + V C++DAA LC++CDR++HSAN LSRRH R
Sbjct: 49 WLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
>TAIR9_protein||AT1G25440.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:8933939-8935284 REVERSE
Length = 418
Score = 53 bits (126), Expect = 7e-008
Identities = 27/55 (49%), Positives = 34/55 (61%), Gaps = 3/55 (5%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCNSQPALVR 15
CD C +R+ YC +D A LC SCD VHSAN L+RRH R L + PA+V+
Sbjct: 17 CDSCVKRRARWYCAADDAFLCQSCDSLVHSANPLARRHERVRL---KTASPAVVK 68
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 53 bits (126), Expect = 7e-008
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = -3
Query: 185 YICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSR 60
++C+ C + V C++DAA LC+SCD ++HSAN L+ RH R
Sbjct: 59 WVCEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHER 100
>TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25709331-25710749 REVERSE
Length = 407
Score = 52 bits (123), Expect = 2e-007
Identities = 23/43 (53%), Positives = 29/43 (67%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLL 51
CD C +R+ YC +D A LC +CD +VHSAN L+RRH R L
Sbjct: 17 CDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRL 59
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 49 bits (116), Expect = 1e-006
Identities = 19/41 (46%), Positives = 26/41 (63%)
Frame = -3
Query: 182 ICDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSR 60
+C C + C++DAA LC +CD +HSAN L+RRH R
Sbjct: 58 VCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
>TAIR9_protein||AT1G73870.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:27779214-27780522 FORWARD
Length = 393
Score = 47 bits (110), Expect = 5e-006
Identities = 22/44 (50%), Positives = 29/44 (65%), Gaps = 1/44 (2%)
Frame = -3
Query: 179 CDFCGDQ-RSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLL 51
CD C + R+ YC +D A LC SCD ++HSAN L++RH R L
Sbjct: 22 CDACMKRSRASWYCPADDAFLCQSCDASIHSANHLAKRHERVRL 65
>TAIR9_protein||AT1G49130.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175936 REVERSE
Length = 327
Score = 47 bits (110), Expect = 5e-006
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCN 36
C+ C ++ ++ YC SD A LC CD +VHSAN ++ +H R +C R N
Sbjct: 28 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER--VCLRTN 73
>TAIR9_protein||AT1G49130.2 | Symbols: | zinc finger (B-box type) family
protein | chr1:18174741-18175811 REVERSE
Length = 320
Score = 47 bits (110), Expect = 5e-006
Identities = 21/48 (43%), Positives = 31/48 (64%), Gaps = 2/48 (4%)
Frame = -3
Query: 179 CDFCGDQRSMVYCRSDAACLCLSCDRNVHSANALSRRHSRTLLCERCN 36
C+ C ++ ++ YC SD A LC CD +VHSAN ++ +H R +C R N
Sbjct: 21 CELCLNKHAVWYCASDDAFLCHVCDESVHSANHVATKHER--VCLRTN 66
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,491,849,528
Number of Sequences: 33410
Number of Extensions: 2491849528
Number of Successful Extensions: 130483807
Number of sequences better than 0.0: 0
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