BLASTX 7.6.2
Query= RU13040 /QuerySize=290
(289 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G03840.1 | Symbols: MGP | MGP (Magpie); nuclei... 92 4e-020
TAIR9_protein||AT1G03840.2 | Symbols: MGP | MGP (Magpie); nuclei... 92 4e-020
TAIR9_protein||AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nu... 92 4e-020
TAIR9_protein||AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidops... 92 7e-020
TAIR9_protein||AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidops... 91 1e-019
TAIR9_protein||AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidops... 90 3e-019
TAIR9_protein||AT5G66730.1 | Symbols: | zinc finger (C2H2 type)... 90 3e-019
TAIR9_protein||AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucle... 89 4e-019
TAIR9_protein||AT1G14580.1 | Symbols: | zinc finger (C2H2 type)... 87 1e-018
TAIR9_protein||AT3G45260.1 | Symbols: | zinc finger (C2H2 type)... 87 1e-018
TAIR9_protein||AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidops... 87 2e-018
TAIR9_protein||AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidops... 87 2e-018
TAIR9_protein||AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabido... 85 6e-018
TAIR9_protein||AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabido... 84 1e-017
TAIR9_protein||AT5G60470.1 | Symbols: | nucleic acid binding / ... 80 2e-016
TAIR9_protein||AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic ac... 57 2e-009
TAIR9_protein||AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic ac... 57 2e-009
TAIR9_protein||AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabido... 55 5e-009
TAIR9_protein||AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabido... 55 5e-009
TAIR9_protein||AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabido... 54 2e-008
TAIR9_protein||AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic ac... 47 2e-006
>TAIR9_protein||AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding
/ protein binding / transcription factor/ zinc ion binding |
chr1:967596-970058 REVERSE
Length = 507
Score = 92 bits (228), Expect = 4e-020
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEE 125
DWKAHSKTCGTREY+CDCGT+FSRRDSFITHRAFCDA+AEE
Sbjct: 160 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEE 200
>TAIR9_protein||AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding
/ protein binding / transcription factor/ zinc ion binding |
chr1:967596-970058 REVERSE
Length = 505
Score = 92 bits (228), Expect = 4e-020
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEE 125
DWKAHSKTCGTREY+CDCGT+FSRRDSFITHRAFCDA+AEE
Sbjct: 158 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEE 198
>TAIR9_protein||AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid
binding / transcription factor/ zinc ion binding |
chr5:17773091-17775513 FORWARD
Length = 467
Score = 92 bits (228), Expect = 4e-020
Identities = 38/41 (92%), Positives = 41/41 (100%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEE 125
DWKAHSKTCGTREY+CDCGT+FSRRDSFITHRAFCDA+AEE
Sbjct: 156 DWKAHSKTCGTREYRCDCGTIFSRRDSFITHRAFCDALAEE 196
>TAIR9_protein||AT3G50700.1 | Symbols: AtIDD2 | AtIDD2 (Arabidopsis thaliana
Indeterminate(ID)-Domain 2); nucleic acid binding / transcription
factor/ zinc ion binding | chr3:18840945-18842829 FORWARD
Length = 453
Score = 92 bits (226), Expect = 7e-020
Identities = 38/42 (90%), Positives = 41/42 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEEN 128
DWKAHSK CGT+EYKCDCGT+FSRRDSFITHRAFCDA+AEEN
Sbjct: 153 DWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEEN 194
>TAIR9_protein||AT1G55110.1 | Symbols: AtIDD7 | AtIDD7 (Arabidopsis thaliana
Indeterminate(ID)-Domain 7); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:20560406-20562625 REVERSE
Length = 456
Score = 91 bits (224), Expect = 1e-019
Identities = 37/42 (88%), Positives = 42/42 (100%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEEN 128
DWKAH+KTCGT+EYKCDCGT+FSRRDSFITHRAFCDA+AEE+
Sbjct: 183 DWKAHAKTCGTKEYKCDCGTLFSRRDSFITHRAFCDALAEES 224
>TAIR9_protein||AT2G02070.1 | Symbols: AtIDD5 | AtIDD5 (Arabidopsis thaliana
Indeterminate(ID)-Domain 5); nucleic acid binding / transcription
factor/ zinc ion binding | chr2:505523-509154 FORWARD
Length = 603
Score = 90 bits (221), Expect = 3e-019
Identities = 36/42 (85%), Positives = 42/42 (100%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEEN 128
DWKAHSKTCGT+EY+CDCGT+FSRRDSFITHRAFCDA+A+E+
Sbjct: 171 DWKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCDALAQES 212
>TAIR9_protein||AT5G66730.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr5:26641914-26643883 REVERSE
Length = 501
Score = 90 bits (221), Expect = 3e-019
Identities = 37/42 (88%), Positives = 41/42 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEEN 128
DWKAHSK CGT+EYKCDCGT+FSRRDSFITHRAFCDA+AEE+
Sbjct: 151 DWKAHSKICGTKEYKCDCGTLFSRRDSFITHRAFCDALAEES 192
>TAIR9_protein||AT5G03150.1 | Symbols: JKD | JKD (JACKDAW); nucleic acid binding
/ protein binding / protein homodimerization/ transcription factor/
zinc ion binding | chr5:745849-748678 FORWARD
Length = 504
Score = 89 bits (219), Expect = 4e-019
Identities = 36/41 (87%), Positives = 40/41 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEE 125
DWKAH+KTCGTREYKCDCGT+FSR+DSFITHRAFCDA+ EE
Sbjct: 173 DWKAHAKTCGTREYKCDCGTLFSRKDSFITHRAFCDALTEE 213
>TAIR9_protein||AT1G14580.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr1:4990070-4992442 FORWARD
Length = 468
Score = 87 bits (215), Expect = 1e-018
Identities = 34/42 (80%), Positives = 41/42 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEEN 128
DWKAHSKTCGT+EY+CDCGT+FSRRDS+ITHRAFCDA+ +E+
Sbjct: 172 DWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQES 213
>TAIR9_protein||AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr3:16596850-16598550 REVERSE
Length = 447
Score = 87 bits (215), Expect = 1e-018
Identities = 35/42 (83%), Positives = 41/42 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEEN 128
DWKAHSK CGT+EY+CDCGT+FSR+DSFITHRAFCDA+AEE+
Sbjct: 159 DWKAHSKICGTKEYRCDCGTLFSRKDSFITHRAFCDALAEES 200
>TAIR9_protein||AT2G02080.1 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor | chr2:518328-521170
REVERSE
Length = 517
Score = 87 bits (214), Expect = 2e-018
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEE 125
DWKAHSKTCGT+EY+CDCGT+FSRRDS+ITHRAFCDA+ +E
Sbjct: 173 DWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQE 213
>TAIR9_protein||AT2G02080.2 | Symbols: AtIDD4 | AtIDD4 (Arabidopsis thaliana
Indeterminate(ID)-Domain 4); transcription factor | chr2:518328-520619
REVERSE
Length = 440
Score = 87 bits (214), Expect = 2e-018
Identities = 34/41 (82%), Positives = 40/41 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEE 125
DWKAHSKTCGT+EY+CDCGT+FSRRDS+ITHRAFCDA+ +E
Sbjct: 96 DWKAHSKTCGTKEYRCDCGTIFSRRDSYITHRAFCDALIQE 136
>TAIR9_protein||AT4G02670.1 | Symbols: AtIDD12 | AtIDD12 (Arabidopsis thaliana
Indeterminate(ID)-Domain 12); nucleic acid binding / transcription
factor/ zinc ion binding | chr4:1176190-1178489 REVERSE
Length = 403
Score = 85 bits (209), Expect = 6e-018
Identities = 33/42 (78%), Positives = 41/42 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEEN 128
DWKAH+K CGTR+Y+CDCGT+FSR+D+FITHRAFCDA+AEE+
Sbjct: 173 DWKAHTKICGTRDYRCDCGTLFSRKDTFITHRAFCDALAEES 214
>TAIR9_protein||AT3G13810.1 | Symbols: AtIDD11 | AtIDD11 (Arabidopsis thaliana
Indeterminate(ID)-Domain 11); nucleic acid binding / transcription
factor/ zinc ion binding | chr3:4544941-4547300 FORWARD
Length = 514
Score = 84 bits (206), Expect = 1e-017
Identities = 35/41 (85%), Positives = 40/41 (97%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEE 125
D KAHSKTCGT+EY+CDCGT+FSRRDSFITHRAFC+A+AEE
Sbjct: 190 DCKAHSKTCGTKEYRCDCGTLFSRRDSFITHRAFCEALAEE 230
>TAIR9_protein||AT5G60470.1 | Symbols: | nucleic acid binding / transcription
factor/ zinc ion binding | chr5:24320614-24322790 FORWARD
Length = 451
Score = 80 bits (196), Expect = 2e-016
Identities = 30/42 (71%), Positives = 40/42 (95%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEEN 128
DWKAH+K CG+RE++CDCGT+FSR+DSFI+HR+FCD +AEE+
Sbjct: 155 DWKAHNKICGSREFRCDCGTLFSRKDSFISHRSFCDVLAEES 196
>TAIR9_protein||AT2G01940.1 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding | chr2:432652-434917 FORWARD
Length = 446
Score = 57 bits (136), Expect = 2e-009
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEENKTP 137
D+KAH KTCGTR + CDCG VFSR +SFI H+ C A + P
Sbjct: 165 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPP 209
>TAIR9_protein||AT2G01940.2 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding | chr2:433232-434917 FORWARD
Length = 357
Score = 57 bits (136), Expect = 2e-009
Identities = 25/45 (55%), Positives = 30/45 (66%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFCDAIAEENKTP 137
D+KAH KTCGTR + CDCG VFSR +SFI H+ C A + P
Sbjct: 76 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDNCSARRVHREPP 120
>TAIR9_protein||AT1G68130.1 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:25532484-25534317 FORWARD
Length = 420
Score = 55 bits (132), Expect = 5e-009
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFC 107
D+KAH KTCGTR + CDCG VFSR +SFI H+ C
Sbjct: 162 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 196
>TAIR9_protein||AT1G68130.2 | Symbols: AtIDD14 | AtIDD14 (Arabidopsis thaliana
Indeterminate(ID)-Domain 14); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:25532843-25534317 FORWARD
Length = 334
Score = 55 bits (132), Expect = 5e-009
Identities = 23/35 (65%), Positives = 27/35 (77%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFC 107
D+KAH KTCGTR + CDCG VFSR +SFI H+ C
Sbjct: 76 DYKAHLKTCGTRGHSCDCGRVFSRVESFIEHQDTC 110
>TAIR9_protein||AT1G25250.1 | Symbols: AtIDD16 | AtIDD16 (Arabidopsis thaliana
Indeterminate(ID)-Domain 16); nucleic acid binding / transcription
factor/ zinc ion binding | chr1:8849549-8851520 FORWARD
Length = 363
Score = 54 bits (128), Expect = 2e-008
Identities = 22/35 (62%), Positives = 27/35 (77%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFSRRDSFITHRAFC 107
D+KAH KTCG+R + CDCG VFSR +SFI H+ C
Sbjct: 132 DYKAHLKTCGSRGHSCDCGRVFSRVESFIEHQDTC 166
>TAIR9_protein||AT2G01940.3 | Symbols: SGR5, ATIDD15 | nucleic acid binding /
transcription factor/ zinc ion binding | chr2:432652-434917 FORWARD
Length = 447
Score = 47 bits (110), Expect = 2e-006
Identities = 23/46 (50%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Frame = +3
Query: 3 DWKAHSKTCGTREYKCDCGTVFS-RRDSFITHRAFCDAIAEENKTP 137
D+KAH KTCGTR + CDCG S R +SFI H+ C A + P
Sbjct: 165 DYKAHLKTCGTRGHSCDCGFFSSFRVESFIEHQDNCSARRVHREPP 210
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,520,843,449
Number of Sequences: 33410
Number of Extensions: 2520843449
Number of Successful Extensions: 130515684
Number of sequences better than 0.0: 0
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