BLASTX 7.6.2
Query= RU13109 /QuerySize=276
(275 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G17300.1 | Symbols: | myb family transcriptio... 92 5e-020
TAIR9_protein||AT5G37260.1 | Symbols: RVE2, CIR1 | RVE2 (REVEILL... 84 2e-017
TAIR9_protein||AT1G18330.1 | Symbols: EPR1 | EPR1 (EARLY-PHYTOCH... 82 5e-017
TAIR9_protein||AT1G18330.2 | Symbols: EPR1 | EPR1 (EARLY-PHYTOCH... 82 5e-017
TAIR9_protein||AT3G10113.1 | Symbols: | myb family transcriptio... 82 5e-017
TAIR9_protein||AT2G46830.1 | Symbols: CCA1 | CCA1 (CIRCADIAN CLO... 81 1e-016
TAIR9_protein||AT1G01060.1 | Symbols: LHY, LHY1 | LHY (LATE ELON... 76 4e-015
TAIR9_protein||AT1G01060.2 | Symbols: LHY, LHY1 | LHY (LATE ELON... 76 4e-015
TAIR9_protein||AT1G01060.3 | Symbols: LHY, LHY1 | LHY (LATE ELON... 76 4e-015
TAIR9_protein||AT1G01060.4 | Symbols: LHY, LHY1 | LHY (LATE ELON... 76 4e-015
TAIR9_protein||AT3G09600.1 | Symbols: | myb family transcriptio... 67 2e-012
TAIR9_protein||AT3G09600.2 | Symbols: | myb family transcriptio... 67 2e-012
TAIR9_protein||AT5G02840.1 | Symbols: LCL1 | LCL1 (LHY/CCA1-like... 67 2e-012
TAIR9_protein||AT5G02840.2 | Symbols: LCL1 | LCL1 (LHY/CCA1-like... 67 2e-012
TAIR9_protein||AT5G02840.3 | Symbols: LCL1 | LCL1 (LHY/CCA1-like... 67 2e-012
TAIR9_protein||AT5G52660.1 | Symbols: | myb family transcriptio... 64 1e-011
TAIR9_protein||AT5G52660.2 | Symbols: | myb family transcriptio... 64 1e-011
TAIR9_protein||AT4G01280.1 | Symbols: | myb family transcriptio... 63 3e-011
TAIR9_protein||AT4G01280.2 | Symbols: | myb family transcriptio... 63 3e-011
TAIR9_protein||AT1G01520.1 | Symbols: | myb family transcriptio... 63 3e-011
>TAIR9_protein||AT5G17300.1 | Symbols: | myb family transcription factor |
chr5:5690435-5692435 REVERSE
Length = 388
Score = 92 bits (227), Expect = 5e-020
Identities = 44/59 (74%), Positives = 52/59 (88%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPDGINTSSADPIDI 179
EH KF+EALKL+GRAWR+I++HVGSKTAVQIRSHAQKFFSKVAR+ G + SS +PI I
Sbjct: 62 EHKKFVEALKLYGRAWRRIEEHVGSKTAVQIRSHAQKFFSKVAREATGGDGSSVEPIVI 120
>TAIR9_protein||AT5G37260.1 | Symbols: RVE2, CIR1 | RVE2 (REVEILLE 2); DNA
binding / transcription factor | chr5:14751344-14752972 REVERSE
Length = 288
Score = 84 bits (205), Expect = 2e-017
Identities = 39/55 (70%), Positives = 50/55 (90%), Gaps = 1/55 (1%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPDGINTSSAD 167
EH KF+EALKL+GRAWR+I++HVG+KTAVQIRSHAQKFF+KVARD G+++ S +
Sbjct: 43 EHEKFVEALKLYGRAWRRIEEHVGTKTAVQIRSHAQKFFTKVARD-FGVSSESIE 96
>TAIR9_protein||AT1G18330.1 | Symbols: EPR1 | EPR1
(EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor |
chr1:6306196-6307640 REVERSE
Length = 347
Score = 82 bits (201), Expect = 5e-017
Identities = 37/59 (62%), Positives = 49/59 (83%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPDGINTSSADPIDI 179
EH++FLEA+KL+GR WR+IQ+H+G+KTAVQIRSHAQKFFSK+A++ D + S I I
Sbjct: 57 EHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSVKAIVI 115
>TAIR9_protein||AT1G18330.2 | Symbols: EPR1 | EPR1
(EARLY-PHYTOCHROME-RESPONSIVE1); DNA binding / transcription factor |
chr1:6306196-6307718 REVERSE
Length = 373
Score = 82 bits (201), Expect = 5e-017
Identities = 37/59 (62%), Positives = 49/59 (83%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPDGINTSSADPIDI 179
EH++FLEA+KL+GR WR+IQ+H+G+KTAVQIRSHAQKFFSK+A++ D + S I I
Sbjct: 83 EHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSVKAIVI 141
>TAIR9_protein||AT3G10113.1 | Symbols: | myb family transcription factor |
chr3:3118043-3119391 REVERSE
Length = 337
Score = 82 bits (201), Expect = 5e-017
Identities = 37/59 (62%), Positives = 49/59 (83%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPDGINTSSADPIDI 179
EH++FLEA+KL+GR WR+IQ+H+G+KTAVQIRSHAQKFFSK+A++ D + S I I
Sbjct: 72 EHDRFLEAIKLYGRGWRQIQEHIGTKTAVQIRSHAQKFFSKMAQEADSRSEGSVKAIVI 130
>TAIR9_protein||AT2G46830.1 | Symbols: CCA1 | CCA1 (CIRCADIAN CLOCK ASSOCIATED
1); DNA binding / transcription activator/ transcription factor/
transcription repressor | chr2:19246005-19248717 FORWARD
Length = 609
Score = 81 bits (198), Expect = 1e-016
Identities = 35/59 (59%), Positives = 48/59 (81%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPDGINTSSADPIDI 179
EHN+F+EAL+L+GRAW+KI++HV +KTAVQIRSHAQKFFSKV ++ + + +DI
Sbjct: 31 EHNRFIEALRLYGRAWQKIEEHVATKTAVQIRSHAQKFFSKVEKEAEAKGVAMGQALDI 89
>TAIR9_protein||AT1G01060.1 | Symbols: LHY, LHY1 | LHY (LATE ELONGATED
HYPOCOTYL); DNA binding / transcription factor | chr1:33992-37061
REVERSE
Length = 646
Score = 76 bits (185), Expect = 4e-015
Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPD--GINTSSADPID 176
EH +FLEAL+L+GRAW++I++H+G+KTAVQIRSHAQKFF+K+ ++ + GI A I+
Sbjct: 31 EHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEVKGIPVCQALDIE 90
Query: 177 I 179
I
Sbjct: 91 I 91
>TAIR9_protein||AT1G01060.2 | Symbols: LHY, LHY1 | LHY (LATE ELONGATED
HYPOCOTYL); DNA binding / transcription factor | chr1:33992-37061
REVERSE
Length = 646
Score = 76 bits (185), Expect = 4e-015
Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPD--GINTSSADPID 176
EH +FLEAL+L+GRAW++I++H+G+KTAVQIRSHAQKFF+K+ ++ + GI A I+
Sbjct: 31 EHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEVKGIPVCQALDIE 90
Query: 177 I 179
I
Sbjct: 91 I 91
>TAIR9_protein||AT1G01060.3 | Symbols: LHY, LHY1 | LHY (LATE ELONGATED
HYPOCOTYL); DNA binding / transcription factor | chr1:33992-37061
REVERSE
Length = 646
Score = 76 bits (185), Expect = 4e-015
Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPD--GINTSSADPID 176
EH +FLEAL+L+GRAW++I++H+G+KTAVQIRSHAQKFF+K+ ++ + GI A I+
Sbjct: 31 EHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEVKGIPVCQALDIE 90
Query: 177 I 179
I
Sbjct: 91 I 91
>TAIR9_protein||AT1G01060.4 | Symbols: LHY, LHY1 | LHY (LATE ELONGATED
HYPOCOTYL); DNA binding / transcription factor | chr1:33992-37061
REVERSE
Length = 645
Score = 76 bits (185), Expect = 4e-015
Identities = 35/61 (57%), Positives = 50/61 (81%), Gaps = 2/61 (3%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPD--GINTSSADPID 176
EH +FLEAL+L+GRAW++I++H+G+KTAVQIRSHAQKFF+K+ ++ + GI A I+
Sbjct: 31 EHERFLEALRLYGRAWQRIEEHIGTKTAVQIRSHAQKFFTKLEKEAEVKGIPVCQALDIE 90
Query: 177 I 179
I
Sbjct: 91 I 91
>TAIR9_protein||AT3G09600.1 | Symbols: | myb family transcription factor |
chr3:2946459-2948270 FORWARD
Length = 299
Score = 67 bits (162), Expect = 2e-012
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARD 137
EH+KFLEAL+L R W+KI+D VGSKT +QIRSHAQK+F KV ++
Sbjct: 50 EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 94
>TAIR9_protein||AT3G09600.2 | Symbols: | myb family transcription factor |
chr3:2946459-2948200 FORWARD
Length = 283
Score = 67 bits (162), Expect = 2e-012
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARD 137
EH+KFLEAL+L R W+KI+D VGSKT +QIRSHAQK+F KV ++
Sbjct: 50 EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 94
>TAIR9_protein||AT5G02840.1 | Symbols: LCL1 | LCL1 (LHY/CCA1-like 1); DNA
binding / transcription factor | chr5:648794-651212 FORWARD
Length = 294
Score = 67 bits (162), Expect = 2e-012
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARD 137
EH+KFLEAL+L R W+KI+D VGSKT +QIRSHAQK+F KV ++
Sbjct: 55 EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 99
>TAIR9_protein||AT5G02840.2 | Symbols: LCL1 | LCL1 (LHY/CCA1-like 1); DNA
binding / transcription factor | chr5:648794-651212 FORWARD
Length = 294
Score = 67 bits (162), Expect = 2e-012
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARD 137
EH+KFLEAL+L R W+KI+D VGSKT +QIRSHAQK+F KV ++
Sbjct: 55 EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 99
>TAIR9_protein||AT5G02840.3 | Symbols: LCL1 | LCL1 (LHY/CCA1-like 1); DNA
binding / transcription factor | chr5:648794-651204 FORWARD
Length = 284
Score = 67 bits (162), Expect = 2e-012
Identities = 30/45 (66%), Positives = 38/45 (84%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARD 137
EH+KFLEAL+L R W+KI+D VGSKT +QIRSHAQK+F KV ++
Sbjct: 55 EHDKFLEALQLFDRDWKKIEDFVGSKTVIQIRSHAQKYFLKVQKN 99
>TAIR9_protein||AT5G52660.1 | Symbols: | myb family transcription factor |
chr5:21359423-21362037 REVERSE
Length = 331
Score = 64 bits (155), Expect = 1e-011
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPDG 146
EH+KFLEAL+L R W+KI+ +GSKT +QIRSHAQK+F KV + G
Sbjct: 79 EHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGTG 126
>TAIR9_protein||AT5G52660.2 | Symbols: | myb family transcription factor |
chr5:21359423-21362037 REVERSE
Length = 332
Score = 64 bits (155), Expect = 1e-011
Identities = 29/48 (60%), Positives = 37/48 (77%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARDPDG 146
EH+KFLEAL+L R W+KI+ +GSKT +QIRSHAQK+F KV + G
Sbjct: 79 EHDKFLEALQLFDRDWKKIEAFIGSKTVIQIRSHAQKYFLKVQKSGTG 126
>TAIR9_protein||AT4G01280.1 | Symbols: | myb family transcription factor |
chr4:535288-536854 FORWARD
Length = 303
Score = 63 bits (152), Expect = 3e-011
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVAR 134
EH+KFLEAL L R W+KI+ VGSKT VQIRSHAQK+F KV +
Sbjct: 66 EHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQK 109
>TAIR9_protein||AT4G01280.2 | Symbols: | myb family transcription factor |
chr4:535288-536854 FORWARD
Length = 304
Score = 63 bits (152), Expect = 3e-011
Identities = 30/44 (68%), Positives = 35/44 (79%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVAR 134
EH+KFLEAL L R W+KI+ VGSKT VQIRSHAQK+F KV +
Sbjct: 66 EHDKFLEALHLFDRDWKKIEAFVGSKTVVQIRSHAQKYFLKVQK 109
>TAIR9_protein||AT1G01520.1 | Symbols: | myb family transcription factor |
chr1:190596-192139 FORWARD
Length = 288
Score = 63 bits (151), Expect = 3e-011
Identities = 29/45 (64%), Positives = 36/45 (80%)
Frame = +3
Query: 3 EHNKFLEALKLHGRAWRKIQDHVGSKTAVQIRSHAQKFFSKVARD 137
EH+KFLEAL L R W+KI+ VGSKT +QIRSHAQK+F KV ++
Sbjct: 68 EHDKFLEALHLFDRDWKKIKAFVGSKTVIQIRSHAQKYFLKVQKN 112
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,579,136,587
Number of Sequences: 33410
Number of Extensions: 2579136587
Number of Successful Extensions: 135958269
Number of sequences better than 0.0: 0
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