BLASTX 7.6.2
Query= RU13112 /QuerySize=300
(299 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-c... 127 1e-030
TAIR9_protein||AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugat... 49 4e-007
TAIR9_protein||AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugat... 49 4e-007
TAIR9_protein||AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CON... 49 4e-007
TAIR9_protein||AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CON... 49 4e-007
TAIR9_protein||AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11 (UB... 48 1e-006
TAIR9_protein||AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQU... 48 1e-006
TAIR9_protein||AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQU... 48 1e-006
TAIR9_protein||AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQU... 48 1e-006
TAIR9_protein||AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-c... 47 1e-006
TAIR9_protein||AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-c... 47 1e-006
TAIR9_protein||AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjug... 47 1e-006
>TAIR9_protein||AT3G17000.1 | Symbols: UBC32 | UBC32 (ubiquitin-conjugating
enzyme 32); ubiquitin-protein ligase | chr3:5797296-5799467 FORWARD
Length = 310
Score = 127 bits (318), Expect = 1e-030
Identities = 58/64 (90%), Positives = 63/64 (98%)
Frame = -1
Query: 194 MAEDKYNRKNPAVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
MA+++YNRKNPAVKRILQEVKEMQ+NPSDDFMSLPLEENIF+WQFAIRGP DTEFEGGIY
Sbjct: 1 MADERYNRKNPAVKRILQEVKEMQANPSDDFMSLPLEENIFEWQFAIRGPGDTEFEGGIY 60
Query: 14 HGRI 3
HGRI
Sbjct: 61 HGRI 64
>TAIR9_protein||AT1G64230.1 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 149
Score = 49 bits (116), Expect = 4e-007
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVF 50
>TAIR9_protein||AT1G64230.2 | Symbols: UBC28 | ubiquitin-conjugating enzyme,
putative | chr1:23833792-23835220 FORWARD
Length = 149
Score = 49 bits (116), Expect = 4e-007
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVF 50
>TAIR9_protein||AT4G27960.1 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917203 REVERSE
Length = 149
Score = 49 bits (116), Expect = 4e-007
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVF 50
>TAIR9_protein||AT4G27960.2 | Symbols: UBC9 | UBC9 (UBIQUITIN CONJUGATING ENZYME
9); ubiquitin-protein ligase | chr4:13916065-13917293 REVERSE
Length = 179
Score = 49 bits (116), Expect = 4e-007
Identities = 20/49 (40%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP D+ + GG++
Sbjct: 32 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSDSPYSGGVF 80
>TAIR9_protein||AT3G08690.1 | Symbols: UBC11, ATUBC11 | UBC11
(UBIQUITIN-CONJUGATING ENZYME 11); ubiquitin-protein ligase |
chr3:2641487-2642489 FORWARD
Length = 149
Score = 48 bits (112), Expect = 1e-006
Identities = 19/49 (38%), Positives = 34/49 (69%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + + P+ E++F WQ I GP ++ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPSNCSAGPVAEDMFHWQATIMGPPESPYAGGVF 50
>TAIR9_protein||AT5G41700.2 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN
CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 149
Score = 48 bits (112), Expect = 1e-006
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVF 50
>TAIR9_protein||AT5G41700.3 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN
CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677021 FORWARD
Length = 146
Score = 48 bits (112), Expect = 1e-006
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVF 50
>TAIR9_protein||AT5G41700.1 | Symbols: UBC8, ATUBC8 | UBC8 (UBIQUITIN
CONJUGATING ENZYME 8); protein binding / ubiquitin-protein ligase |
chr5:16676072-16677223 FORWARD
Length = 149
Score = 48 bits (112), Expect = 1e-006
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPAESPYSGGVF 50
>TAIR9_protein||AT5G53300.1 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating
enzyme 10); ubiquitin-protein ligase | chr5:21632802-21633989 REVERSE
Length = 149
Score = 47 bits (111), Expect = 1e-006
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVF 50
>TAIR9_protein||AT5G53300.2 | Symbols: UBC10 | UBC10 (ubiquitin-conjugating
enzyme 10); ubiquitin-protein ligase | chr5:21632802-21633989 REVERSE
Length = 149
Score = 47 bits (111), Expect = 1e-006
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVF 50
>TAIR9_protein||AT5G53300.3 | Symbols: | UBC10 (ubiquitin-conjugating enzyme
10); ubiquitin-protein ligase | chr5:21633187-21633989 REVERSE
Length = 110
Score = 47 bits (111), Expect = 1e-006
Identities = 19/49 (38%), Positives = 33/49 (67%)
Frame = -1
Query: 161 AVKRILQEVKEMQSNPSDDFMSLPLEENIFDWQFAIRGPRDTEFEGGIY 15
A KRIL+E+K++Q +P + P+ E++F WQ I GP ++ + GG++
Sbjct: 2 ASKRILKELKDLQKDPPTSCSAGPVAEDMFHWQATIMGPSESPYAGGVF 50
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,579,136,587
Number of Sequences: 33410
Number of Extensions: 2579136587
Number of Successful Extensions: 135958269
Number of sequences better than 0.0: 0
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