BLASTX 7.6.2
Query= RU13223 /QuerySize=260
(259 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type... 93 3e-020
TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type... 91 2e-019
TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type... 91 2e-019
TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type... 71 1e-013
TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type... 70 2e-013
TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type... 70 2e-013
TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type... 70 2e-013
TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type... 67 1e-012
TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 67 2e-012
TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 67 2e-012
TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 67 2e-012
TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 67 2e-012
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 60 3e-010
TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); tr... 60 3e-010
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 57 2e-009
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 55 6e-009
TAIR9_protein||AT3G21890.1 | Symbols: | zinc finger (B-box type... 55 7e-009
TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONST... 53 4e-008
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 53 4e-008
TAIR9_protein||AT4G27310.1 | Symbols: | zinc finger (B-box type... 52 6e-008
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 51 1e-007
TAIR9_protein||AT5G54470.1 | Symbols: | zinc finger (B-box type... 50 2e-007
TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger... 49 4e-007
TAIR9_protein||AT3G21150.1 | Symbols: | zinc finger (B-box type... 48 9e-007
>TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:9775768-9777657 REVERSE
Length = 434
Score = 93 bits (229), Expect = 3e-020
Identities = 39/54 (72%), Positives = 47/54 (87%)
Frame = +2
Query: 98 TAGESIPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
++ E +PCDFC ++ AVL+C+AD+AKLCL CDQ VH ANLLSRKHVRSQICDNC
Sbjct: 2 SSSERVPCDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNC 55
>TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 403
Score = 91 bits (223), Expect = 2e-019
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +2
Query: 95 ATAGESIPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
+T + C+FC ++ AVL+C+AD+AKLCL CDQHVH ANLLSRKHVRSQICDNC
Sbjct: 4 STTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNC 58
>TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 402
Score = 91 bits (223), Expect = 2e-019
Identities = 38/55 (69%), Positives = 46/55 (83%)
Frame = +2
Query: 95 ATAGESIPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
+T + C+FC ++ AVL+C+AD+AKLCL CDQHVH ANLLSRKHVRSQICDNC
Sbjct: 4 STTESVVACEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNC 58
>TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:8709942-8711106 REVERSE
Length = 331
Score = 71 bits (173), Expect = 1e-013
Identities = 28/47 (59%), Positives = 37/47 (78%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CDFC + A++YCK+DSAKLCL CD +VH AN LS++H RS +C+ C
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKC 51
>TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609036 FORWARD
Length = 238
Score = 70 bits (170), Expect = 2e-013
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CD+C A++YCKADSAKLCL CD+ VH AN L KH RS +CD+C
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSC 59
>TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609476 FORWARD
Length = 333
Score = 70 bits (170), Expect = 2e-013
Identities = 29/47 (61%), Positives = 35/47 (74%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CD+C A++YCKADSAKLCL CD+ VH AN L KH RS +CD+C
Sbjct: 13 CDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSC 59
>TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type) family
protein | chr3:7706748-7708093 FORWARD
Length = 365
Score = 70 bits (170), Expect = 2e-013
Identities = 28/47 (59%), Positives = 35/47 (74%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CD C+ A++YCK+D AKLCL CD HVH AN LS +H+RS IC+ C
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKC 51
>TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type) family
protein | chr5:19561719-19563113 REVERSE
Length = 374
Score = 67 bits (163), Expect = 1e-012
Identities = 24/47 (51%), Positives = 38/47 (80%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CDFC +Q +++YC++D+A LCL CD++VH AN LS++H R+ +C+ C
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERC 51
>TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 67 bits (161), Expect = 2e-012
Identities = 24/47 (51%), Positives = 37/47 (78%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CDFC +Q +++YC++D+A LCL CD+ VH AN LS++H R+ +C+ C
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERC 51
>TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 67 bits (161), Expect = 2e-012
Identities = 24/47 (51%), Positives = 37/47 (78%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CDFC +Q +++YC++D+A LCL CD+ VH AN LS++H R+ +C+ C
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERC 51
>TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 67 bits (161), Expect = 2e-012
Identities = 24/47 (51%), Positives = 37/47 (78%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CDFC +Q +++YC++D+A LCL CD+ VH AN LS++H R+ +C+ C
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERC 51
>TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 67 bits (161), Expect = 2e-012
Identities = 24/47 (51%), Positives = 37/47 (78%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CDFC +Q +++YC++D+A LCL CD+ VH AN LS++H R+ +C+ C
Sbjct: 5 CDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERC 51
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 60 bits (143), Expect = 3e-010
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 116 PCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
PCD C +YC ADSA LC+ CD VH AN ++ +H R ++C++C
Sbjct: 19 PCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESC 66
>TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171873-5172697 REVERSE
Length = 275
Score = 60 bits (143), Expect = 3e-010
Identities = 22/48 (45%), Positives = 31/48 (64%)
Frame = +2
Query: 116 PCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
PCD C +YC ADSA LC+ CD VH AN ++ +H R ++C++C
Sbjct: 19 PCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESC 66
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 57 bits (135), Expect = 2e-009
Identities = 22/47 (46%), Positives = 29/47 (61%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CD C +YC+ADSA LC CD VH AN L+ +H R ++C +C
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSC 58
Score = 52 bits (123), Expect = 6e-008
Identities = 21/43 (48%), Positives = 26/43 (60%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQI 247
C C PA +CKAD+A LC CD +H AN L+R+H R I
Sbjct: 55 CQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQRVPI 97
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 55 bits (132), Expect = 6e-009
Identities = 21/47 (44%), Positives = 29/47 (61%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CD C +YC+ADSA LC CD VH AN ++ +H R ++C +C
Sbjct: 16 CDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSC 62
Score = 51 bits (120), Expect = 1e-007
Identities = 21/43 (48%), Positives = 25/43 (58%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQI 247
C C PA CKAD+A LC CD +H AN L+R+H R I
Sbjct: 59 CQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQRVPI 101
>TAIR9_protein||AT3G21890.1 | Symbols: | zinc finger (B-box type) family
protein | chr3:7709298-7709663 REVERSE
Length = 122
Score = 55 bits (131), Expect = 7e-009
Identities = 24/49 (48%), Positives = 34/49 (69%), Gaps = 1/49 (2%)
Frame = +2
Query: 113 IPCDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
+ C+ C D A ++C+ADSA LC CD+ VHGAN L+ +HVR +C +C
Sbjct: 29 VRCELC-DGDASVFCEADSAFLCRKCDRWVHGANFLAWRHVRRVLCTSC 76
>TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567621 FORWARD
Length = 221
Score = 53 bits (125), Expect = 4e-008
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQI 247
C+ C PA + CKAD+A LC+ CD+ +H AN LSR+H R I
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPI 93
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 53 bits (125), Expect = 4e-008
Identities = 22/43 (51%), Positives = 29/43 (67%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQI 247
C+ C PA + CKAD+A LC+ CD+ +H AN LSR+H R I
Sbjct: 51 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHERVPI 93
>TAIR9_protein||AT4G27310.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:13675853-13676616 FORWARD
Length = 224
Score = 52 bits (123), Expect = 6e-008
Identities = 23/47 (48%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
CD C+ A +YC++D A LC CD VHGAN L KH R +C C
Sbjct: 5 CDLCNG-VARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSAC 50
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 51 bits (121), Expect = 1e-007
Identities = 20/40 (50%), Positives = 28/40 (70%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVR 238
C+ C PA + CKAD+A LC+ CD+ +H AN L+R+H R
Sbjct: 93 CEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLARRHER 132
>TAIR9_protein||AT5G54470.1 | Symbols: | zinc finger (B-box type) family
protein | chr5:22114584-22115315 REVERSE
Length = 216
Score = 50 bits (118), Expect = 2e-007
Identities = 22/47 (46%), Positives = 28/47 (59%), Gaps = 1/47 (2%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
C+ C A +YC++D A LC CD VHGAN L KH+R +C C
Sbjct: 6 CELCCG-VARMYCESDQASLCWDCDGKVHGANFLVAKHMRCLLCSAC 51
>TAIR9_protein||AT5G57660.1 | Symbols: ATCOL5, COL5 | zinc finger (B-box type)
family protein | chr5:23355573-23356729 FORWARD
Length = 356
Score = 49 bits (116), Expect = 4e-007
Identities = 19/40 (47%), Positives = 26/40 (65%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVR 238
C+ C PA + CKAD+A LC+ CD +H AN L+ +H R
Sbjct: 61 CEVCEQAPAAVTCKADAAALCVSCDADIHSANPLASRHER 100
>TAIR9_protein||AT3G21150.1 | Symbols: | zinc finger (B-box type) family
protein | chr3:7412713-7413390 REVERSE
Length = 226
Score = 48 bits (113), Expect = 9e-007
Identities = 22/47 (46%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +2
Query: 119 CDFCSDQPAVLYCKADSAKLCLFCDQHVHGANLLSRKHVRSQICDNC 259
C+ C + A L+C ADSA LC CD H +N L +H R IC NC
Sbjct: 5 CELCGAE-ADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNC 50
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,579,136,587
Number of Sequences: 33410
Number of Extensions: 2579136587
Number of Successful Extensions: 135958269
Number of sequences better than 0.0: 0
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