BLASTX 7.6.2
Query= RU13281 /QuerySize=258
(257 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive t... 163 3e-041
TAIR9_protein||AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive t... 163 3e-041
TAIR9_protein||AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive t... 163 3e-041
TAIR9_protein||AT5G22890.1 | Symbols: | zinc finger (C2H2 type)... 91 2e-019
TAIR9_protein||AT1G03840.1 | Symbols: MGP | MGP (Magpie); nuclei... 49 4e-007
TAIR9_protein||AT1G03840.2 | Symbols: MGP | MGP (Magpie); nuclei... 49 5e-007
TAIR9_protein||AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nu... 48 9e-007
TAIR9_protein||AT3G45260.1 | Symbols: | zinc finger (C2H2 type)... 47 3e-006
>TAIR9_protein||AT1G34370.2 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551002-12552501 FORWARD
Length = 500
Score = 163 bits (410), Expect = 3e-041
Identities = 76/87 (87%), Positives = 80/87 (91%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 KDEEDADDGENLPPGTYEILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYK 182
KDE+D ++GENLPPG+YEILQLEKEEILAPHTHFC ICGKGFKRDANLRMHMRGHGDEYK
Sbjct: 212 KDEDDVEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYK 271
Query: 183 TPAALAKPNKES--SSEPTLIKRYSCP 257
T AALAKPNKES SEP LIKRYSCP
Sbjct: 272 TAAALAKPNKESVPGSEPMLIKRYSCP 298
>TAIR9_protein||AT1G34370.1 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551002-12552501 FORWARD
Length = 500
Score = 163 bits (410), Expect = 3e-041
Identities = 76/87 (87%), Positives = 80/87 (91%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 KDEEDADDGENLPPGTYEILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYK 182
KDE+D ++GENLPPG+YEILQLEKEEILAPHTHFC ICGKGFKRDANLRMHMRGHGDEYK
Sbjct: 212 KDEDDVEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYK 271
Query: 183 TPAALAKPNKES--SSEPTLIKRYSCP 257
T AALAKPNKES SEP LIKRYSCP
Sbjct: 272 TAAALAKPNKESVPGSEPMLIKRYSCP 298
>TAIR9_protein||AT1G34370.3 | Symbols: STOP1 | STOP1 (sensitive to proton
rhizotoxicity 1); nucleic acid binding / transcription factor/ zinc ion
binding | chr1:12551449-12552501 FORWARD
Length = 351
Score = 163 bits (410), Expect = 3e-041
Identities = 76/87 (87%), Positives = 80/87 (91%), Gaps = 2/87 (2%)
Frame = +3
Query: 3 KDEEDADDGENLPPGTYEILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYK 182
KDE+D ++GENLPPG+YEILQLEKEEILAPHTHFC ICGKGFKRDANLRMHMRGHGDEYK
Sbjct: 63 KDEDDVEEGENLPPGSYEILQLEKEEILAPHTHFCTICGKGFKRDANLRMHMRGHGDEYK 122
Query: 183 TPAALAKPNKES--SSEPTLIKRYSCP 257
T AALAKPNKES SEP LIKRYSCP
Sbjct: 123 TAAALAKPNKESVPGSEPMLIKRYSCP 149
>TAIR9_protein||AT5G22890.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr5:7653541-7654662 REVERSE
Length = 374
Score = 91 bits (223), Expect = 2e-019
Identities = 41/72 (56%), Positives = 52/72 (72%), Gaps = 2/72 (2%)
Frame = +3
Query: 45 GTYEILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYKTPAALAKPNKESSS 224
G+Y+IL+L+ ++LA +TH+C ICGKGFKRDANLRMHMR HGDEYKT AL P +
Sbjct: 199 GSYDILELDVADLLAKYTHYCQICGKGFKRDANLRMHMRAHGDEYKTREALISPTSQDKK 258
Query: 225 EPTLIKR--YSC 254
+K+ YSC
Sbjct: 259 GGYSLKKHYYSC 270
>TAIR9_protein||AT1G03840.1 | Symbols: MGP | MGP (Magpie); nucleic acid binding
/ protein binding / transcription factor/ zinc ion binding |
chr1:967596-970058 REVERSE
Length = 507
Score = 49 bits (116), Expect = 4e-007
Identities = 21/55 (38%), Positives = 32/55 (58%)
Frame = +3
Query: 39 PPGTYEILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYKTPAALAK 203
P E++ L + ++A + C ICGKGF+RD NL++H RGH +K +K
Sbjct: 50 PDPEAEVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSK 104
>TAIR9_protein||AT1G03840.2 | Symbols: MGP | MGP (Magpie); nucleic acid binding
/ protein binding / transcription factor/ zinc ion binding |
chr1:967596-970058 REVERSE
Length = 505
Score = 49 bits (115), Expect = 5e-007
Identities = 20/50 (40%), Positives = 31/50 (62%)
Frame = +3
Query: 54 EILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYKTPAALAK 203
E++ L + ++A + C ICGKGF+RD NL++H RGH +K +K
Sbjct: 53 EVIALSPKTLMATNRFLCEICGKGFQRDQNLQLHRRGHNLPWKLKQRTSK 102
>TAIR9_protein||AT5G44160.1 | Symbols: NUC | NUC (nutcracker); nucleic acid
binding / transcription factor/ zinc ion binding |
chr5:17773091-17775513 FORWARD
Length = 467
Score = 48 bits (113), Expect = 9e-007
Identities = 20/55 (36%), Positives = 31/55 (56%)
Frame = +3
Query: 39 PPGTYEILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYKTPAALAK 203
P E++ L ++A + C +CGKGF+RD NL++H RGH +K +K
Sbjct: 46 PDPEAEVIALSPTTLMATNRFLCEVCGKGFQRDQNLQLHRRGHNLPWKLKQRTSK 100
>TAIR9_protein||AT3G45260.1 | Symbols: | zinc finger (C2H2 type) family protein
| chr3:16596850-16598550 REVERSE
Length = 447
Score = 47 bits (109), Expect = 3e-006
Identities = 22/67 (32%), Positives = 33/67 (49%), Gaps = 3/67 (4%)
Frame = +3
Query: 39 PPGTYEILQLEKEEILAPHTHFCAICGKGFKRDANLRMHMRGHGDEYKTPAALAKPNKES 218
P E++ L ++ + C +C KGFKRD NL++H RGH +K + NKE
Sbjct: 48 PDPDAEVIALSPNSLMTTNRFICEVCNKGFKRDQNLQLHRRGHNLPWKLK---QRTNKEQ 104
Query: 219 SSEPTLI 239
+ I
Sbjct: 105 VKKKVYI 111
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,579,136,587
Number of Sequences: 33410
Number of Extensions: 2579136587
Number of Successful Extensions: 135958269
Number of sequences better than 0.0: 0
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