BLASTX 7.6.2
Query= RU13291 /QuerySize=247
(246 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 125 8e-030
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 85 9e-018
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 84 2e-017
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 82 7e-017
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 82 7e-017
TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); ... 66 4e-012
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 65 5e-012
TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW... 60 2e-010
TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription... 60 3e-010
TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SC... 59 5e-010
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 59 7e-010
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 59 7e-010
TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE... 57 3e-009
TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription... 55 6e-009
TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription... 55 6e-009
TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription... 55 6e-009
TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription... 55 6e-009
TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transc... 54 2e-008
TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcri... 54 2e-008
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 50 2e-007
TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription... 45 8e-006
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 125 bits (312), Expect = 8e-030
Identities = 61/82 (74%), Positives = 71/82 (86%)
Frame = +1
Query: 1 KSVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQ 180
+ VHIIDFDINQGNQY+TLI+ +AELPGK P LRLTG+DDPESVQR +GGL IG RLEQ
Sbjct: 328 EEVHIIDFDINQGNQYMTLIRSIAELPGKRPRLRLTGIDDPESVQRSIGGLRIIGLRLEQ 387
Query: 181 LAEGLGVSFEFQAVASKTSIVT 246
LAE GVSF+F+A+ SKTSIV+
Sbjct: 388 LAEDNGVSFKFKAMPSKTSIVS 409
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 85 bits (208), Expect = 9e-018
Identities = 42/69 (60%), Positives = 51/69 (73%)
Frame = +1
Query: 7 VHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQLA 186
VHIIDF I QG+QY+ LIQELA+ PG PP LR+TGVDD +S GGL+ +G+RL LA
Sbjct: 263 VHIIDFQIAQGSQYMFLIQELAKRPGGPPLLRVTGVDDSQSTYARGGGLSLVGERLATLA 322
Query: 187 EGLGVSFEF 213
+ GV FEF
Sbjct: 323 QSCGVPFEF 331
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 84 bits (205), Expect = 2e-017
Identities = 40/73 (54%), Positives = 51/73 (69%)
Frame = +1
Query: 7 VHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQLA 186
VHIIDF I+QG Q+++LI+ L PG PP++R+TG+DDP S GGL +GQRL +LA
Sbjct: 335 VHIIDFQISQGGQWVSLIRALGARPGGPPNVRITGIDDPRSSFARQGGLELVGQRLGKLA 394
Query: 187 EGLGVSFEFQAVA 225
E GV FEF A
Sbjct: 395 EMCGVPFEFHGAA 407
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 82 bits (200), Expect = 7e-017
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +1
Query: 7 VHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQLA 186
VHIIDF I QG+Q++TLIQ A PG PP +R+TG+DD S GGL+ +G RL +LA
Sbjct: 228 VHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLA 287
Query: 187 EGLGVSFEFQAVASKTSIV 243
+ V FEF +V+ S V
Sbjct: 288 KQFNVPFEFNSVSVSVSEV 306
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 82 bits (200), Expect = 7e-017
Identities = 40/79 (50%), Positives = 52/79 (65%)
Frame = +1
Query: 7 VHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQLA 186
VHIIDF I QG+Q++TLIQ A PG PP +R+TG+DD S GGL+ +G RL +LA
Sbjct: 228 VHIIDFQIGQGSQWVTLIQAFAARPGGPPRIRITGIDDMTSAYARGGGLSIVGNRLAKLA 287
Query: 187 EGLGVSFEFQAVASKTSIV 243
+ V FEF +V+ S V
Sbjct: 288 KQFNVPFEFNSVSVSVSEV 306
>TAIR9_protein||AT3G03450.1 | Symbols: RGL2 | RGL2 (RGA-LIKE 2); transcription
factor | chr3:819636-821279 REVERSE
Length = 548
Score = 66 bits (159), Expect = 4e-012
Identities = 32/78 (41%), Positives = 49/78 (62%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 KSVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQ 180
+ VH+ID +NQG Q+ L+Q LA PG PP RLTG+ P++ L +G +L Q
Sbjct: 284 RRVHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGIGPPQTENS--DSLQQLGWKLAQ 341
Query: 181 LAEGLGVSFEFQAVASKT 234
A+ +GV FEF+ +A+++
Sbjct: 342 FAQNMGVEFEFKGLAAES 359
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 65 bits (158), Expect = 5e-012
Identities = 32/75 (42%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Frame = +1
Query: 7 VHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQLA 186
VH+ID +NQG Q+ L+Q LA PG PP RLTGV +P + + G+ +G +L QLA
Sbjct: 259 VHVIDLGLNQGMQWPALMQALALRPGGPPSFRLTGVGNPSNRE----GIQELGWKLAQLA 314
Query: 187 EGLGVSFEFQAVASK 231
+ +GV F+F + ++
Sbjct: 315 QAIGVEFKFNGLTTE 329
>TAIR9_protein||AT3G54220.1 | Symbols: SCR, SGR1 | SCR (SCARECROW); protein
binding / protein homodimerization/ sequence-specific DNA binding /
transcription factor | chr3:20070550-20072625 FORWARD
Length = 654
Score = 60 bits (145), Expect = 2e-010
Identities = 35/76 (46%), Positives = 43/76 (56%), Gaps = 6/76 (7%)
Frame = +1
Query: 4 SVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQL 183
SVHIID DI QG Q+ L LA PG PPH+RLTG+ + L G+RL
Sbjct: 400 SVHIIDLDIMQGLQWPGLFHILASRPGGPPHVRLTGLG------TSMEALQATGKRLSDF 453
Query: 184 AEGLGVSFEFQAVASK 231
A+ LG+ FEF +A K
Sbjct: 454 ADKLGLPFEFCPLAEK 469
>TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1337
Score = 60 bits (143), Expect = 3e-010
Identities = 30/77 (38%), Positives = 46/77 (59%)
Frame = +1
Query: 1 KSVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQ 180
K++HIIDF I+ G Q+ +LI LA G LR+TG++ P+ RP G+ G+RL +
Sbjct: 426 KTIHIIDFGISDGFQWPSLIHRLAWRRGSSCKLRITGIELPQRGFRPAEGVIETGRRLAK 485
Query: 181 LAEGLGVSFEFQAVASK 231
+ + FE+ A+A K
Sbjct: 486 YCQKFNIPFEYNAIAQK 502
>TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor | chr1:2313828-2316137
REVERSE
Length = 770
Score = 59 bits (141), Expect = 5e-010
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 1/77 (1%)
Frame = +1
Query: 4 SVHIIDFDINQGNQYITLIQELA-ELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQ 180
++HIIDF I+ G Q+ LI L+ PG P LR+TG++ P+ RP G+ G RL +
Sbjct: 500 TIHIIDFGISYGFQWPALIHRLSLSRPGGSPKLRITGIELPQRGFRPAEGVQETGHRLAR 559
Query: 181 LAEGLGVSFEFQAVASK 231
+ V FE+ A+A K
Sbjct: 560 YCQRHNVPFEYNAIAQK 576
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 59 bits (140), Expect = 7e-010
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 KSVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQ 180
K VH+IDF ++QG Q+ L+Q LA PG PP RLTG+ P L+ +G +L
Sbjct: 269 KRVHVIDFSMSQGLQWPALMQALALRPGGPPVFRLTGIGPP--APDNFDYLHEVGCKLAH 326
Query: 181 LAEGLGVSFEFQAVASKT 234
LAE + V FE++ + T
Sbjct: 327 LAEAIHVEFEYRGFVANT 344
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 59 bits (140), Expect = 7e-010
Identities = 32/78 (41%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Frame = +1
Query: 1 KSVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQ 180
K VH+IDF +NQG Q+ L+Q LA G PP RLTG+ P L+ +G +L Q
Sbjct: 321 KRVHVIDFSMNQGLQWPALMQALALREGGPPTFRLTGIGPPAPDNS--DHLHEVGCKLAQ 378
Query: 181 LAEGLGVSFEFQAVASKT 234
LAE + V FE++ + +
Sbjct: 379 LAEAIHVEFEYRGFVANS 396
>TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1);
transcription factor | chr1:24748327-24749862 FORWARD
Length = 512
Score = 57 bits (135), Expect = 3e-009
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 6/75 (8%)
Frame = +1
Query: 1 KSVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQ 180
+ VH+ID +N G Q+ LIQ LA P PP RLTG+ + + +G +L Q
Sbjct: 252 EKVHVIDLGLNHGLQWPALIQALALRPNGPPDFRLTGIG------YSLTDIQEVGWKLGQ 305
Query: 181 LAEGLGVSFEFQAVA 225
LA +GV+FEF+++A
Sbjct: 306 LASTIGVNFEFKSIA 320
>TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription factor family
protein | chr1:23399391-23401367 REVERSE
Length = 659
Score = 55 bits (132), Expect = 6e-009
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 6/75 (8%)
Frame = +1
Query: 7 VHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQLA 186
VHIIDFDI QG Q+ + Q LA P H+R+TG+ + + LN G RL A
Sbjct: 386 VHIIDFDIKQGLQWPSFFQSLASRINPPHHVRITGIGESKL------ELNETGDRLHGFA 439
Query: 187 EGLGVSFEFQAVASK 231
E + + FEF V +
Sbjct: 440 EAMNLQFEFHPVVDR 454
>TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 584
Score = 55 bits (132), Expect = 6e-009
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +1
Query: 4 SVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQL 183
++HIIDF I G Q+ LIQ L++ PP LR+TG++ P+S RP + G+RL++
Sbjct: 315 TLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRF 374
Query: 184 AEGLGVSFEFQAVASKTSIVT 246
+ V FE+ +A +T
Sbjct: 375 CDKFNVPFEYSFIAKNWENIT 395
>TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 454
Score = 55 bits (132), Expect = 6e-009
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +1
Query: 4 SVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQL 183
++HIIDF I G Q+ LIQ L++ PP LR+TG++ P+S RP + G+RL++
Sbjct: 185 TLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRF 244
Query: 184 AEGLGVSFEFQAVASKTSIVT 246
+ V FE+ +A +T
Sbjct: 245 CDKFNVPFEYSFIAKNWENIT 265
>TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 552
Score = 55 bits (132), Expect = 6e-009
Identities = 30/81 (37%), Positives = 47/81 (58%)
Frame = +1
Query: 4 SVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQL 183
++HIIDF I G Q+ LIQ L++ PP LR+TG++ P+S RP + G+RL++
Sbjct: 283 TLHIIDFGILYGFQWPCLIQALSKRDIGPPLLRVTGIELPQSGFRPSERVEETGRRLKRF 342
Query: 184 AEGLGVSFEFQAVASKTSIVT 246
+ V FE+ +A +T
Sbjct: 343 CDKFNVPFEYSFIAKNWENIT 363
>TAIR9_protein||AT1G50420.1 | Symbols: SCL3, SCL-3 | SCL3; transcription factor
| chr1:18678177-18679625 REVERSE
Length = 483
Score = 54 bits (128), Expect = 2e-008
Identities = 29/77 (37%), Positives = 42/77 (54%), Gaps = 6/77 (7%)
Frame = +1
Query: 1 KSVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQ 180
K VH+ID D ++ Q++ L+Q P PPHLR+TGV + V L + RL +
Sbjct: 163 KMVHVIDLDASEPAQWLALLQAFNSRPEGPPHLRITGVHHQKEV------LEQMAHRLIE 216
Query: 181 LAEGLGVSFEFQAVASK 231
AE L + F+F V S+
Sbjct: 217 EAEKLDIPFQFNPVVSR 233
>TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 719
Score = 54 bits (127), Expect = 2e-008
Identities = 30/75 (40%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Frame = +1
Query: 7 VHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQLA 186
VH+IDF I G Q+ TLI + P +R+TG++ P+ RP + GQRL A
Sbjct: 452 VHVIDFGILYGFQWPTLIHRFSMYGS--PKVRITGIEFPQPGFRPAQRVEETGQRLAAYA 509
Query: 187 EGLGVSFEFQAVASK 231
+ GV FE++A+A K
Sbjct: 510 KLFGVPFEYKAIAKK 524
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 50 bits (118), Expect = 2e-007
Identities = 22/38 (57%), Positives = 28/38 (73%)
Frame = +1
Query: 7 VHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDD 120
+HIIDF I QG+Q+I LIQ A PG P++R+TGV D
Sbjct: 158 IHIIDFQIGQGSQWIALIQAFAARPGGAPNIRITGVGD 195
>TAIR9_protein||AT5G41920.1 | Symbols: | scarecrow transcription factor family
protein | chr5:16779982-16781199 FORWARD
Length = 406
Score = 45 bits (105), Expect = 8e-006
Identities = 27/73 (36%), Positives = 36/73 (49%), Gaps = 6/73 (8%)
Frame = +1
Query: 4 SVHIIDFDINQGNQYITLIQELAELPGKPPHLRLTGVDDPESVQRPVGGLNTIGQRLEQL 183
SVHIID D+ QG Q+ L LA P K +R+TG + L + G+RL
Sbjct: 151 SVHIIDLDVMQGLQWPALFHILASRPRKLRSIRITGFGSSSDL------LASTGRRLADF 204
Query: 184 AEGLGVSFEFQAV 222
A L + FEF +
Sbjct: 205 ASSLNLPFEFHPI 217
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,579,136,587
Number of Sequences: 33410
Number of Extensions: 2579136587
Number of Successful Extensions: 135958269
Number of sequences better than 0.0: 0
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