BLASTX 7.6.2
Query= RU13460 /QuerySize=698
(697 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G25710.1 | Symbols: HCS1 | HCS1 (HOLOCARBOXYLA... 265 2e-071
TAIR9_protein||AT2G25710.2 | Symbols: HCS1 | HCS1 (HOLOCARBOXYLA... 265 2e-071
TAIR9_protein||AT1G37150.3 | Symbols: HCS2 | HCS2 (holocarboxyla... 253 1e-067
TAIR9_protein||AT1G37150.2 | Symbols: HCS2 | HCS2 (holocarboxyla... 253 1e-067
TAIR9_protein||AT1G37150.4 | Symbols: HCS2 | HCS2 (holocarboxyla... 184 4e-047
TAIR9_protein||AT1G37150.1 | Symbols: HCS2 | HCS2 (holocarboxyla... 169 1e-042
>TAIR9_protein||AT2G25710.1 | Symbols: HCS1 | HCS1 (HOLOCARBOXYLASE SYNTHASE);
biotin-[acetyl-CoA-carboxylase] ligase/ catalytic |
chr2:10952719-10955061 FORWARD
Length = 368
Score = 265 bits (676), Expect = 2e-071
Identities = 125/186 (67%), Positives = 155/186 (83%), Gaps = 2/186 (1%)
Frame = +1
Query: 142 MDCNSSLY.WCCAGKSQAESNIAEGLKNSNALKLSDNGELSILLDSELKKPFKEDD-AFG 318
M+ ++S C GKS E+ +A+GLKN N+LKL DN ++S++L+SE K K+DD +F
Sbjct: 39 MESDASCSLVLC-GKSSVETEVAKGLKNKNSLKLPDNTKVSLILESEAKNLVKDDDNSFN 97
Query: 319 IDSFMNSLSTDRFGRLLLWSPRLPSTQDVVSQNFCELPNGAVCVADVQYKGRGRSKNVWE 498
+ FMNS+ T RFGR L+WSPRL ST DVVS NF ELP G+VCV D+Q+KGRGR+KNVWE
Sbjct: 98 LSLFMNSIITHRFGRFLIWSPRLSSTHDVVSHNFSELPVGSVCVTDIQFKGRGRTKNVWE 157
Query: 499 SPKGCLLFSFTLQMEDGRIVPLIQYVVSLAITEAIKDVCDRNGLPYIDVRIKWPNDLYLN 678
SPKGCL++SFTL+MEDGR+VPLIQYVVSLA+TEA+KDVCD+ GLPYIDV+IKWPNDLY+N
Sbjct: 158 SPKGCLMYSFTLEMEDGRVVPLIQYVVSLAVTEAVKDVCDKKGLPYIDVKIKWPNDLYVN 217
Query: 679 GLKVGG 696
GLKVGG
Sbjct: 218 GLKVGG 223
>TAIR9_protein||AT2G25710.2 | Symbols: HCS1 | HCS1 (HOLOCARBOXYLASE SYNTHASE);
biotin-[acetyl-CoA-carboxylase] ligase/ catalytic |
chr2:10952719-10955061 FORWARD
Length = 368
Score = 265 bits (676), Expect = 2e-071
Identities = 125/186 (67%), Positives = 155/186 (83%), Gaps = 2/186 (1%)
Frame = +1
Query: 142 MDCNSSLY.WCCAGKSQAESNIAEGLKNSNALKLSDNGELSILLDSELKKPFKEDD-AFG 318
M+ ++S C GKS E+ +A+GLKN N+LKL DN ++S++L+SE K K+DD +F
Sbjct: 39 MESDASCSLVLC-GKSSVETEVAKGLKNKNSLKLPDNTKVSLILESEAKNLVKDDDNSFN 97
Query: 319 IDSFMNSLSTDRFGRLLLWSPRLPSTQDVVSQNFCELPNGAVCVADVQYKGRGRSKNVWE 498
+ FMNS+ T RFGR L+WSPRL ST DVVS NF ELP G+VCV D+Q+KGRGR+KNVWE
Sbjct: 98 LSLFMNSIITHRFGRFLIWSPRLSSTHDVVSHNFSELPVGSVCVTDIQFKGRGRTKNVWE 157
Query: 499 SPKGCLLFSFTLQMEDGRIVPLIQYVVSLAITEAIKDVCDRNGLPYIDVRIKWPNDLYLN 678
SPKGCL++SFTL+MEDGR+VPLIQYVVSLA+TEA+KDVCD+ GLPYIDV+IKWPNDLY+N
Sbjct: 158 SPKGCLMYSFTLEMEDGRVVPLIQYVVSLAVTEAVKDVCDKKGLPYIDVKIKWPNDLYVN 217
Query: 679 GLKVGG 696
GLKVGG
Sbjct: 218 GLKVGG 223
>TAIR9_protein||AT1G37150.3 | Symbols: HCS2 | HCS2 (holocarboxylase synthetase
2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic |
chr1:14175198-14177098 REVERSE
Length = 298
Score = 253 bits (644), Expect = 1e-067
Identities = 121/186 (65%), Positives = 150/186 (80%), Gaps = 4/186 (2%)
Frame = +1
Query: 142 MDCNSSLY.WCCAGKSQAESNIAEGLKNSNALKLSDNGELSILLDSELKKPFKEDD-AFG 318
+D + SL + GKS E++ A LKN+N LKL DN ++SI L SE+K ++DD +F
Sbjct: 3 IDASCSLVLY---GKSSVETDTATRLKNNNVLKLPDNSKVSIFLQSEIKNLVRDDDSSFN 59
Query: 319 IDSFMNSLSTDRFGRLLLWSPRLPSTQDVVSQNFCELPNGAVCVADVQYKGRGRSKNVWE 498
+ FMNS+ST RFGR L+WSP L ST DVVS NF E+P G+VCV+D+Q KGRGR+KNVWE
Sbjct: 60 LSLFMNSISTHRFGRFLIWSPYLSSTHDVVSHNFSEIPVGSVCVSDIQLKGRGRTKNVWE 119
Query: 499 SPKGCLLFSFTLQMEDGRIVPLIQYVVSLAITEAIKDVCDRNGLPYIDVRIKWPNDLYLN 678
SPKGCL++SFTL+MEDGR+VPLIQYVVSLA+TEA+KDVCD+ GL Y DV+IKWPNDLYLN
Sbjct: 120 SPKGCLMYSFTLEMEDGRVVPLIQYVVSLAVTEAVKDVCDKKGLSYNDVKIKWPNDLYLN 179
Query: 679 GLKVGG 696
GLK+GG
Sbjct: 180 GLKIGG 185
>TAIR9_protein||AT1G37150.2 | Symbols: HCS2 | HCS2 (holocarboxylase synthetase
2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic |
chr1:14175029-14177098 REVERSE
Length = 330
Score = 253 bits (644), Expect = 1e-067
Identities = 121/186 (65%), Positives = 150/186 (80%), Gaps = 4/186 (2%)
Frame = +1
Query: 142 MDCNSSLY.WCCAGKSQAESNIAEGLKNSNALKLSDNGELSILLDSELKKPFKEDD-AFG 318
+D + SL + GKS E++ A LKN+N LKL DN ++SI L SE+K ++DD +F
Sbjct: 3 IDASCSLVLY---GKSSVETDTATRLKNNNVLKLPDNSKVSIFLQSEIKNLVRDDDSSFN 59
Query: 319 IDSFMNSLSTDRFGRLLLWSPRLPSTQDVVSQNFCELPNGAVCVADVQYKGRGRSKNVWE 498
+ FMNS+ST RFGR L+WSP L ST DVVS NF E+P G+VCV+D+Q KGRGR+KNVWE
Sbjct: 60 LSLFMNSISTHRFGRFLIWSPYLSSTHDVVSHNFSEIPVGSVCVSDIQLKGRGRTKNVWE 119
Query: 499 SPKGCLLFSFTLQMEDGRIVPLIQYVVSLAITEAIKDVCDRNGLPYIDVRIKWPNDLYLN 678
SPKGCL++SFTL+MEDGR+VPLIQYVVSLA+TEA+KDVCD+ GL Y DV+IKWPNDLYLN
Sbjct: 120 SPKGCLMYSFTLEMEDGRVVPLIQYVVSLAVTEAVKDVCDKKGLSYNDVKIKWPNDLYLN 179
Query: 679 GLKVGG 696
GLK+GG
Sbjct: 180 GLKIGG 185
>TAIR9_protein||AT1G37150.4 | Symbols: HCS2 | HCS2 (holocarboxylase synthetase
2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic |
chr1:14175029-14177279 REVERSE
Length = 287
Score = 184 bits (467), Expect = 4e-047
Identities = 83/107 (77%), Positives = 97/107 (90%)
Frame = +1
Query: 376 SPRLPSTQDVVSQNFCELPNGAVCVADVQYKGRGRSKNVWESPKGCLLFSFTLQMEDGRI 555
SP L ST DVVS NF E+P G+VCV+D+Q KGRGR+KNVWESPKGCL++SFTL+MEDGR+
Sbjct: 36 SPYLSSTHDVVSHNFSEIPVGSVCVSDIQLKGRGRTKNVWESPKGCLMYSFTLEMEDGRV 95
Query: 556 VPLIQYVVSLAITEAIKDVCDRNGLPYIDVRIKWPNDLYLNGLKVGG 696
VPLIQYVVSLA+TEA+KDVCD+ GL Y DV+IKWPNDLYLNGLK+GG
Sbjct: 96 VPLIQYVVSLAVTEAVKDVCDKKGLSYNDVKIKWPNDLYLNGLKIGG 142
>TAIR9_protein||AT1G37150.1 | Symbols: HCS2 | HCS2 (holocarboxylase synthetase
2); biotin-[acetyl-CoA-carboxylase] ligase/ catalytic |
chr1:14175198-14176839 REVERSE
Length = 215
Score = 169 bits (428), Expect = 1e-042
Identities = 74/94 (78%), Positives = 88/94 (93%)
Frame = +1
Query: 415 NFCELPNGAVCVADVQYKGRGRSKNVWESPKGCLLFSFTLQMEDGRIVPLIQYVVSLAIT 594
NF E+P G+VCV+D+Q KGRGR+KNVWESPKGCL++SFTL+MEDGR+VPLIQYVVSLA+T
Sbjct: 9 NFSEIPVGSVCVSDIQLKGRGRTKNVWESPKGCLMYSFTLEMEDGRVVPLIQYVVSLAVT 68
Query: 595 EAIKDVCDRNGLPYIDVRIKWPNDLYLNGLKVGG 696
EA+KDVCD+ GL Y DV+IKWPNDLYLNGLK+GG
Sbjct: 69 EAVKDVCDKKGLSYNDVKIKWPNDLYLNGLKIGG 102
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,608,474,133
Number of Sequences: 33410
Number of Extensions: 2608474133
Number of Successful Extensions: 136120738
Number of sequences better than 0.0: 0
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