BLASTX 7.6.2
Query= RU13588 /QuerySize=230
(229 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G70510.1 | Symbols: KNAT2, ATK1 | KNAT2 (KNOTT... 71 1e-013
TAIR9_protein||AT1G23380.2 | Symbols: KNAT6, KNAT6L, KNAT6S | KN... 70 2e-013
TAIR9_protein||AT1G23380.1 | Symbols: KNAT6, KNAT6L, KNAT6S | KN... 70 2e-013
TAIR9_protein||AT4G08150.1 | Symbols: KNAT1, BP, BP1 | KNAT1 (KN... 53 4e-008
TAIR9_protein||AT1G62360.1 | Symbols: STM, BUM1, SHL, WAM1, BUM,... 47 2e-006
>TAIR9_protein||AT1G70510.1 | Symbols: KNAT2, ATK1 | KNAT2 (KNOTTED-LIKE FROM
ARABIDOPSIS THALIANA 2); transcription factor | chr1:26576635-26582145
FORWARD
Length = 311
Score = 71 bits (173), Expect = 1e-013
Identities = 31/37 (83%), Positives = 35/37 (94%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLC 111
+ETYCD+LVKYK+DLARPFDEATTF+NKIE QL NLC
Sbjct: 132 METYCDILVKYKTDLARPFDEATTFINKIEMQLQNLC 168
>TAIR9_protein||AT1G23380.2 | Symbols: KNAT6, KNAT6L, KNAT6S | KNAT6; DNA
binding / transcription activator/ transcription factor |
chr1:8297499-8302492 REVERSE
Length = 330
Score = 70 bits (171), Expect = 2e-013
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLC 111
+ETYCD+LVKYKSDLARPFDEAT FLNKIE QL NLC
Sbjct: 150 METYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLC 186
>TAIR9_protein||AT1G23380.1 | Symbols: KNAT6, KNAT6L, KNAT6S | KNAT6; DNA
binding / transcription activator/ transcription factor |
chr1:8297499-8302492 REVERSE
Length = 328
Score = 70 bits (171), Expect = 2e-013
Identities = 32/37 (86%), Positives = 34/37 (91%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLC 111
+ETYCD+LVKYKSDLARPFDEAT FLNKIE QL NLC
Sbjct: 148 METYCDILVKYKSDLARPFDEATCFLNKIEMQLRNLC 184
>TAIR9_protein||AT4G08150.1 | Symbols: KNAT1, BP, BP1 | KNAT1 (KNOTTED-LIKE FROM
ARABIDOPSIS THALIANA); transcription factor | chr4:5147969-5150610
REVERSE
Length = 399
Score = 53 bits (125), Expect = 4e-008
Identities = 22/37 (59%), Positives = 28/37 (75%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLC 111
+E YCDMLVKY+ +L RP EA F+ +IE+QLS LC
Sbjct: 198 MEAYCDMLVKYREELTRPIQEAMEFIRRIESQLSMLC 234
>TAIR9_protein||AT1G62360.1 | Symbols: STM, BUM1, SHL, WAM1, BUM, WAM | STM
(SHOOT MERISTEMLESS); transcription factor | chr1:23058796-23061722
REVERSE
Length = 383
Score = 47 bits (111), Expect = 2e-006
Identities = 19/42 (45%), Positives = 30/42 (71%)
Frame = +1
Query: 1 LETYCDMLVKYKSDLARPFDEATTFLNKIETQLSNLCIRTLS 126
+E YC+MLVKY+ +L++PF EA FL ++E Q +L + + S
Sbjct: 184 MEAYCEMLVKYEQELSKPFKEAMVFLQRVECQFKSLSLSSPS 225
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,608,474,133
Number of Sequences: 33410
Number of Extensions: 2608474133
Number of Successful Extensions: 136120738
Number of sequences better than 0.0: 0
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