BLASTX 7.6.2
Query= RU13742 /QuerySize=246
(245 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G53430.1 | Symbols: SDG29, SET29, ATX5 | SDG29... 109 6e-025
TAIR9_protein||AT4G27910.1 | Symbols: ATX4, SDG16 | SDG16 (SET D... 102 5e-023
TAIR9_protein||AT3G61740.1 | Symbols: SDG14, ATX3 | SDG14 (SET D... 78 1e-015
TAIR9_protein||AT3G61740.2 | Symbols: ATX3 | SDG14 (SET DOMAIN P... 78 1e-015
TAIR9_protein||AT3G61723.1 | Symbols: | FUNCTIONS IN: molecular... 49 4e-007
>TAIR9_protein||AT5G53430.1 | Symbols: SDG29, SET29, ATX5 | SDG29 (SET DOMAIN
GROUP 29); DNA binding / protein binding / zinc ion binding |
chr5:21677623-21683166 FORWARD
Length = 1044
Score = 109 bits (270), Expect = 6e-025
Identities = 46/79 (58%), Positives = 62/79 (78%), Gaps = 2/79 (2%)
Frame = -1
Query: 242 DSGTWVRCDGCRVWVHAECDRINTNYYKNLGGTDYFCPPCKVKFNFELSDSEKEQPKVKC 63
DS +WVRCDGC+VW+H+ CD+I+ ++K+LG TDY+CP C+ KF+FELSDSEK P K
Sbjct: 427 DSQSWVRCDGCKVWIHSACDQISHKHFKDLGETDYYCPTCRTKFDFELSDSEK--PDSKS 484
Query: 62 RSTKNEAQLVLPNKVTVLC 6
+ KN A +VLP+KV V+C
Sbjct: 485 KLGKNNAPMVLPDKVIVVC 503
>TAIR9_protein||AT4G27910.1 | Symbols: ATX4, SDG16 | SDG16 (SET DOMAIN PROTEIN
16); protein binding / zinc ion binding | chr4:13894694-13900256
FORWARD
Length = 1028
Score = 102 bits (253), Expect = 5e-023
Identities = 44/79 (55%), Positives = 60/79 (75%), Gaps = 2/79 (2%)
Frame = -1
Query: 242 DSGTWVRCDGCRVWVHAECDRINTNYYKNLGGTDYFCPPCKVKFNFELSDSEKEQPKVKC 63
D+ +WVRCDGC+V +HAECD+I+ + K+L TDY+CP C+ KFNF+LSDSEK+ K K
Sbjct: 412 DNKSWVRCDGCKVRIHAECDQISDRHLKDLRETDYYCPTCRAKFNFDLSDSEKQNSKSKV 471
Query: 62 RSTKNEAQLVLPNKVTVLC 6
K + Q+VLP+KV V+C
Sbjct: 472 --AKGDGQMVLPDKVIVVC 488
>TAIR9_protein||AT3G61740.1 | Symbols: SDG14, ATX3 | SDG14 (SET DOMAIN PROTEIN
14); DNA binding / protein binding / zinc ion binding |
chr3:22851133-22856548 REVERSE
Length = 1019
Score = 78 bits (190), Expect = 1e-015
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = -1
Query: 242 DSGTWVRCDGCRVWVHAECDRINTNYYKNLGGTDYFCPPCKVKFNFELSDSEKEQPKVKC 63
D G WV CDGC VWVHAECD I +K L +Y+CP CKV+ EL+ + E+
Sbjct: 376 DDGDWVCCDGCDVWVHAECDNITNERFKELEHNNYYCPDCKVQ--HELTPTILEEQNSVF 433
Query: 62 RSTKNEAQLVLPNKVTVLC 6
+ST+ + LP+ +TV+C
Sbjct: 434 KSTEKTTETGLPDAITVVC 452
>TAIR9_protein||AT3G61740.2 | Symbols: ATX3 | SDG14 (SET DOMAIN PROTEIN 14); DNA
binding / protein binding / zinc ion binding | chr3:22851133-22856548
REVERSE
Length = 983
Score = 78 bits (190), Expect = 1e-015
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = -1
Query: 242 DSGTWVRCDGCRVWVHAECDRINTNYYKNLGGTDYFCPPCKVKFNFELSDSEKEQPKVKC 63
D G WV CDGC VWVHAECD I +K L +Y+CP CKV+ EL+ + E+
Sbjct: 376 DDGDWVCCDGCDVWVHAECDNITNERFKELEHNNYYCPDCKVQ--HELTPTILEEQNSVF 433
Query: 62 RSTKNEAQLVLPNKVTVLC 6
+ST+ + LP+ +TV+C
Sbjct: 434 KSTEKTTETGLPDAITVVC 452
>TAIR9_protein||AT3G61723.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; BEST Arabidopsis thaliana protein match is:
SDG14 (SET DOMAIN PROTEIN 14); DNA binding / protein binding / zinc ion
binding (TAIR:AT3G61740.2); Has 20 Blast hits to 20 proteins in 3
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 20;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr3:22846468-22846786 REVERSE
Length = 74
Score = 49 bits (116), Expect = 4e-007
Identities = 20/38 (52%), Positives = 24/38 (63%)
Frame = -1
Query: 230 WVRCDGCRVWVHAECDRINTNYYKNLGGTDYFCPPCKV 117
+V CDG VWVHA CD I +K L +Y+CP CKV
Sbjct: 3 YVCCDGRNVWVHAGCDIITNERFKELEHNNYYCPDCKV 40
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,638,211,360
Number of Sequences: 33410
Number of Extensions: 2638211360
Number of Successful Extensions: 136195546
Number of sequences better than 0.0: 0
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