BLASTX 7.6.2
Query= RU13744 /QuerySize=182
(181 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G26580.1 | Symbols: | FUNCTIONS IN: molecular... 81 1e-016
TAIR9_protein||AT2G03470.1 | Symbols: | myb family transcriptio... 79 5e-016
TAIR9_protein||AT2G03470.2 | Symbols: | myb family transcriptio... 79 5e-016
TAIR9_protein||AT1G13880.1 | Symbols: | ELM2 domain-containing ... 77 3e-015
TAIR9_protein||AT4G11400.1 | Symbols: | ARID/BRIGHT DNA-binding... 56 5e-009
>TAIR9_protein||AT1G26580.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
cellular_component unknown; EXPRESSED IN: 24 plant structures;
EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein
match is: myb family transcription factor / ELM2 domain-containing
protein (TAIR:AT2G03470.1); Has 82 Blast hits to 82 proteins in 12
species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 4; Plants - 78;
Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). |
chr1:9185620-9187213 FORWARD
Length = 494
Score = 81 bits (198), Expect = 1e-016
Identities = 34/53 (64%), Positives = 44/53 (83%)
Frame = -3
Query: 173 KWSEEEEHLFHDVVLSNPASLGKNFWHNLSVAFPSRTHKDVVSYYFNVFMLRR 15
KWS+E+ LFH+VV SNP +LG+NFW +L AF SRT K++VS+YFNVF+LRR
Sbjct: 250 KWSDEDAQLFHEVVYSNPVTLGQNFWRHLEAAFCSRTQKEIVSFYFNVFVLRR 302
>TAIR9_protein||AT2G03470.1 | Symbols: | myb family transcription factor / ELM2
domain-containing protein | chr2:1045694-1047130 REVERSE
Length = 451
Score = 79 bits (193), Expect = 5e-016
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = -3
Query: 179 ADKWSEEEEHLFHDVVLSNPASLGKNFWHNLSVAFPSRTHKDVVSYYFNVFMLRR 15
A W+EEEE LFH VV SNP S G++FW L FPSRT K++VSYYFNVF+LRR
Sbjct: 224 ASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRR 278
>TAIR9_protein||AT2G03470.2 | Symbols: | myb family transcription factor / ELM2
domain-containing protein | chr2:1045694-1047130 REVERSE
Length = 450
Score = 79 bits (193), Expect = 5e-016
Identities = 36/55 (65%), Positives = 42/55 (76%)
Frame = -3
Query: 179 ADKWSEEEEHLFHDVVLSNPASLGKNFWHNLSVAFPSRTHKDVVSYYFNVFMLRR 15
A W+EEEE LFH VV SNP S G++FW L FPSRT K++VSYYFNVF+LRR
Sbjct: 223 ASLWTEEEEDLFHKVVYSNPFSAGRDFWKQLKGTFPSRTMKELVSYYFNVFILRR 277
>TAIR9_protein||AT1G13880.1 | Symbols: | ELM2 domain-containing protein |
chr1:4749603-4750967 FORWARD
Length = 425
Score = 77 bits (187), Expect = 3e-015
Identities = 33/55 (60%), Positives = 45/55 (81%)
Frame = -3
Query: 179 ADKWSEEEEHLFHDVVLSNPASLGKNFWHNLSVAFPSRTHKDVVSYYFNVFMLRR 15
A + +E+EE LFH++V SNP S+ ++FW +L AFPSRT K++VSYYFNVF+LRR
Sbjct: 230 AARLTEDEEDLFHEIVYSNPVSMDRDFWKHLKSAFPSRTMKEIVSYYFNVFILRR 284
>TAIR9_protein||AT4G11400.1 | Symbols: | ARID/BRIGHT DNA-binding
domain-containing protein / ELM2 domain-containing protein / Myb-like
DNA-binding domain-containing protein | chr4:6938717-6940539 FORWARD
Length = 574
Score = 56 bits (133), Expect = 5e-009
Identities = 23/53 (43%), Positives = 37/53 (69%), Gaps = 4/53 (7%)
Frame = -3
Query: 173 KWSEEEEHLFHDVVLSNPASLGKNFWHNLSVAFPSRTHKDVVSYYFNVFMLRR 15
+W+EEEE F D+++++P S FW N + FP + +++VSYYFNVF++ R
Sbjct: 474 RWTEEEEKRFKDMIIADPQS----FWTNAAKNFPKKKREELVSYYFNVFLINR 522
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,638,211,360
Number of Sequences: 33410
Number of Extensions: 2638211360
Number of Successful Extensions: 136195546
Number of sequences better than 0.0: 0
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