BLASTX 7.6.2
Query= RU13768 /QuerySize=309
(308 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G08130.1 | Symbols: BIM1 | BIM1; DNA binding /... 96 3e-021
TAIR9_protein||AT5G08130.2 | Symbols: BIM1 | BIM1; DNA binding /... 96 3e-021
TAIR9_protein||AT5G08130.3 | Symbols: | BIM1; DNA binding / pro... 96 3e-021
TAIR9_protein||AT1G69010.1 | Symbols: BIM2 | BIM2 (BES1-interact... 87 1e-018
TAIR9_protein||AT5G38860.1 | Symbols: BIM3 | BIM3 (BES1-interact... 70 2e-013
>TAIR9_protein||AT5G08130.1 | Symbols: BIM1 | BIM1; DNA binding / protein
binding / transcription factor | chr5:2606655-2608652 REVERSE
Length = 410
Score = 96 bits (238), Expect = 3e-021
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -2
Query: 169 KEGKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQYLQEKVTKYEAPYQGWNHD 2
+ KINDRFQMLR+LIP+SDQKRDKASFLLEVIEYIQ+LQEK KY YQGWNH+
Sbjct: 168 RRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHE 223
Score = 45 bits (104), Expect = 9e-006
Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -3
Query: 240 KVDVKSS--DQKANTPRSKHSATEQRRRVK 157
K DV+ S DQK NTPRSKHSATEQRRR K
Sbjct: 142 KADVRGSPNDQKLNTPRSKHSATEQRRRSK 171
>TAIR9_protein||AT5G08130.2 | Symbols: BIM1 | BIM1; DNA binding / protein
binding / transcription factor | chr5:2606655-2609571 REVERSE
Length = 530
Score = 96 bits (238), Expect = 3e-021
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -2
Query: 169 KEGKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQYLQEKVTKYEAPYQGWNHD 2
+ KINDRFQMLR+LIP+SDQKRDKASFLLEVIEYIQ+LQEK KY YQGWNH+
Sbjct: 288 RRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHE 343
Score = 45 bits (104), Expect = 9e-006
Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -3
Query: 240 KVDVKSS--DQKANTPRSKHSATEQRRRVK 157
K DV+ S DQK NTPRSKHSATEQRRR K
Sbjct: 262 KADVRGSPNDQKLNTPRSKHSATEQRRRSK 291
>TAIR9_protein||AT5G08130.3 | Symbols: | BIM1; DNA binding / protein binding /
transcription factor | chr5:2606655-2608652 REVERSE
Length = 409
Score = 96 bits (238), Expect = 3e-021
Identities = 44/56 (78%), Positives = 49/56 (87%)
Frame = -2
Query: 169 KEGKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQYLQEKVTKYEAPYQGWNHD 2
+ KINDRFQMLR+LIP+SDQKRDKASFLLEVIEYIQ+LQEK KY YQGWNH+
Sbjct: 168 RRSKINDRFQMLRQLIPNSDQKRDKASFLLEVIEYIQFLQEKADKYVTSYQGWNHE 223
Score = 45 bits (104), Expect = 9e-006
Identities = 23/30 (76%), Positives = 24/30 (80%), Gaps = 2/30 (6%)
Frame = -3
Query: 240 KVDVKSS--DQKANTPRSKHSATEQRRRVK 157
K DV+ S DQK NTPRSKHSATEQRRR K
Sbjct: 142 KADVRGSPNDQKLNTPRSKHSATEQRRRSK 171
>TAIR9_protein||AT1G69010.1 | Symbols: BIM2 | BIM2 (BES1-interacting Myc-like
protein 2); DNA binding / transcription factor | chr1:25941804-25943599
FORWARD
Length = 312
Score = 87 bits (215), Expect = 1e-018
Identities = 39/56 (69%), Positives = 48/56 (85%)
Frame = -2
Query: 169 KEGKINDRFQMLRELIPHSDQKRDKASFLLEVIEYIQYLQEKVTKYEAPYQGWNHD 2
+ KIN+RFQ+LRELIP+S+QKRD ASFLLEVI+Y+QYLQEKV KYE Y GW+ +
Sbjct: 57 RRSKINERFQILRELIPNSEQKRDTASFLLEVIDYVQYLQEKVQKYEGSYPGWSQE 112
>TAIR9_protein||AT5G38860.1 | Symbols: BIM3 | BIM3 (BES1-interacting Myc-like
protein 3); DNA binding / transcription factor | chr5:15559083-15560911
FORWARD
Length = 299
Score = 70 bits (170), Expect = 2e-013
Identities = 35/55 (63%), Positives = 42/55 (76%), Gaps = 2/55 (3%)
Frame = -2
Query: 169 KEGKINDRFQMLRELIP--HSDQKRDKASFLLEVIEYIQYLQEKVTKYEAPYQGW 11
+ KIN+RFQ L ++IP +DQKRDKASFLLEVIEYI +LQEKV YE +Q W
Sbjct: 45 RRSKINERFQSLMDIIPQNQNDQKRDKASFLLEVIEYIHFLQEKVHMYEDSHQMW 99
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,638,211,360
Number of Sequences: 33410
Number of Extensions: 2638211360
Number of Successful Extensions: 136195546
Number of sequences better than 0.0: 0
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