BLASTX 7.6.2
Query= RU13820 /QuerySize=274
(273 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN... 164 1e-041
TAIR9_protein||AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONS... 164 1e-041
TAIR9_protein||AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONS... 161 9e-041
TAIR9_protein||AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONS... 161 9e-041
TAIR9_protein||AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 137 2e-033
TAIR9_protein||AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 132 5e-032
TAIR9_protein||AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, T... 132 5e-032
TAIR9_protein||AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF1... 132 6e-032
TAIR9_protein||AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONO... 126 3e-030
TAIR9_protein||AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 100 2e-022
TAIR9_protein||AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 100 2e-022
TAIR9_protein||AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 ... 100 2e-022
TAIR9_protein||AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONS... 94 1e-020
TAIR9_protein||AT2G33860.1 | Symbols: ETT, ARF3 | ETT (ETTIN); D... 89 6e-019
TAIR9_protein||AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 85 8e-018
TAIR9_protein||AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 85 8e-018
TAIR9_protein||AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONS... 85 8e-018
TAIR9_protein||AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONS... 82 4e-017
TAIR9_protein||AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONS... 82 4e-017
TAIR9_protein||AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPO... 76 3e-015
TAIR9_protein||AT2G28350.1 | Symbols: ARF10 | ARF10 (AUXIN RESPO... 70 2e-013
TAIR9_protein||AT4G30080.1 | Symbols: ARF16 | ARF16 (AUXIN RESPO... 66 4e-012
TAIR9_protein||AT1G34170.1 | Symbols: ARF13 | transcription fact... 65 7e-012
>TAIR9_protein||AT5G37020.1 | Symbols: ARF8, ATARF8 | ARF8 (AUXIN RESPONSE
FACTOR 8); transcription factor | chr5:14630151-14634106 FORWARD
Length = 812
Score = 164 bits (414), Expect = 1e-041
Identities = 79/86 (91%), Positives = 83/86 (96%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
IGLLAAAAHAS+TNSCFTVF++PRAS SEFVI LSKYIKAVFHTR+SVGMRFRMLFETEE
Sbjct: 246 IGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEE 305
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
SSVRRYMGTITGISDLD VRWPNSHW
Sbjct: 306 SSVRRYMGTITGISDLDSVRWPNSHW 331
>TAIR9_protein||AT5G37020.2 | Symbols: ARF8 | ARF8 (AUXIN RESPONSE FACTOR 8);
transcription factor | chr5:14630151-14633916 FORWARD
Length = 774
Score = 164 bits (414), Expect = 1e-041
Identities = 79/86 (91%), Positives = 83/86 (96%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
IGLLAAAAHAS+TNSCFTVF++PRAS SEFVI LSKYIKAVFHTR+SVGMRFRMLFETEE
Sbjct: 246 IGLLAAAAHASATNSCFTVFFHPRASQSEFVIQLSKYIKAVFHTRISVGMRFRMLFETEE 305
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
SSVRRYMGTITGISDLD VRWPNSHW
Sbjct: 306 SSVRRYMGTITGISDLDSVRWPNSHW 331
>TAIR9_protein||AT1G30330.1 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 934
Score = 161 bits (406), Expect = 9e-041
Identities = 75/86 (87%), Positives = 82/86 (95%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
+GLLAAAAHA++TNS FT+FYNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEE
Sbjct: 247 LGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEE 306
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
SSVRRYMGTITGI DLDP RW NSHW
Sbjct: 307 SSVRRYMGTITGICDLDPTRWANSHW 332
>TAIR9_protein||AT1G30330.2 | Symbols: ARF6 | ARF6 (AUXIN RESPONSE FACTOR 6);
transcription factor | chr1:10686125-10690036 REVERSE
Length = 936
Score = 161 bits (406), Expect = 9e-041
Identities = 75/86 (87%), Positives = 82/86 (95%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
+GLLAAAAHA++TNS FT+FYNPRASPSEFVIPL+KY+KAV+HTRVSVGMRFRMLFETEE
Sbjct: 249 LGLLAAAAHAAATNSRFTIFYNPRASPSEFVIPLAKYVKAVYHTRVSVGMRFRMLFETEE 308
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
SSVRRYMGTITGI DLDP RW NSHW
Sbjct: 309 SSVRRYMGTITGICDLDPTRWANSHW 334
>TAIR9_protein||AT5G20730.2 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/
transcription factor/ transcription regulator | chr5:7016704-7021504
REVERSE
Length = 1165
Score = 137 bits (343), Expect = 2e-033
Identities = 63/86 (73%), Positives = 77/86 (89%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
IG+LAAAAHA++ NS FT+FYNPRA+P+EFV+PL+KY KA++ +VS+GMRFRM+FETEE
Sbjct: 247 IGVLAAAAHANANNSPFTIFYNPRAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETEE 305
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
VRRYMGT+TGISDLDPVRW NS W
Sbjct: 306 CGVRRYMGTVTGISDLDPVRWKNSQW 331
>TAIR9_protein||AT5G20730.1 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP | NPH4
(NON-PHOTOTROPHIC HYPOCOTYL); DNA binding / transcription activator/
transcription factor/ transcription regulator | chr5:7016704-7021504
REVERSE
Length = 1166
Score = 132 bits (331), Expect = 5e-032
Identities = 63/87 (72%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPR-ASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETE 177
IG+LAAAAHA++ NS FT+FYNPR A+P+EFV+PL+KY KA++ +VS+GMRFRM+FETE
Sbjct: 247 IGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETE 305
Query: 178 ESSVRRYMGTITGISDLDPVRWPNSHW 258
E VRRYMGT+TGISDLDPVRW NS W
Sbjct: 306 ECGVRRYMGTVTGISDLDPVRWKNSQW 332
>TAIR9_protein||AT5G20730.3 | Symbols: NPH4, MSG1, IAA21, ARF7, TIR5, BIP,
IAA23, IAA25 | NPH4 (NON-PHOTOTROPHIC HYPOCOTYL); DNA binding /
transcription activator/ transcription factor/ transcription regulator
| chr5:7016704-7021504 REVERSE
Length = 1151
Score = 132 bits (331), Expect = 5e-032
Identities = 63/87 (72%), Positives = 77/87 (88%), Gaps = 2/87 (2%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPR-ASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETE 177
IG+LAAAAHA++ NS FT+FYNPR A+P+EFV+PL+KY KA++ +VS+GMRFRM+FETE
Sbjct: 247 IGVLAAAAHANANNSPFTIFYNPRWAAPAEFVVPLAKYTKAMY-AQVSLGMRFRMIFETE 305
Query: 178 ESSVRRYMGTITGISDLDPVRWPNSHW 258
E VRRYMGT+TGISDLDPVRW NS W
Sbjct: 306 ECGVRRYMGTVTGISDLDPVRWKNSQW 332
>TAIR9_protein||AT1G19220.1 | Symbols: ARF19, IAA22, ARF11 | ARF19 (AUXIN
RESPONSE FACTOR 19); DNA binding / transcription factor |
chr1:6628395-6632779 REVERSE
Length = 1087
Score = 132 bits (330), Expect = 6e-032
Identities = 61/86 (70%), Positives = 76/86 (88%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
IG+LAAAAHA++ +S FT+F+NPRASPSEFV+PL+KY KA++ +VS+GMRFRM+FETE+
Sbjct: 246 IGILAAAAHANANSSPFTIFFNPRASPSEFVVPLAKYNKALY-AQVSLGMRFRMMFETED 304
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
VRRYMGT+TGISDLDPVRW S W
Sbjct: 305 CGVRRYMGTVTGISDLDPVRWKGSQW 330
>TAIR9_protein||AT1G19850.1 | Symbols: MP, ARF5, IAA24 | MP (MONOPTEROS);
transcription factor | chr1:6887353-6891182 FORWARD
Length = 903
Score = 126 bits (316), Expect = 3e-030
Identities = 58/86 (67%), Positives = 72/86 (83%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
IG+LAAAAHA++ + F +FYNPRA P+EFVIPL+KY KA+ +++SVGMRF M+FETE+
Sbjct: 278 IGVLAAAAHATANRTPFLIFYNPRACPAEFVIPLAKYRKAICGSQLSVGMRFGMMFETED 337
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
S RRYMGTI GISDLDP+RWP S W
Sbjct: 338 SGKRRYMGTIVGISDLDPLRWPGSKW 363
>TAIR9_protein||AT5G62000.1 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 100 bits (248), Expect = 2e-022
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
+G+LA A HA ST + FTV+Y PR SPSEF++P +Y+++V S+GMRF+M FE EE
Sbjct: 284 LGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEE 342
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
+ +R+ GTI GI + DP RWP S W
Sbjct: 343 APEQRFTGTIVGIEESDPTRWPKSKW 368
>TAIR9_protein||AT5G62000.2 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 100 bits (248), Expect = 2e-022
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
+G+LA A HA ST + FTV+Y PR SPSEF++P +Y+++V S+GMRF+M FE EE
Sbjct: 284 LGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEE 342
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
+ +R+ GTI GI + DP RWP S W
Sbjct: 343 APEQRFTGTIVGIEESDPTRWPKSKW 368
>TAIR9_protein||AT5G62000.3 | Symbols: ARF2, ARF1-BP, HSS | ARF2 (AUXIN RESPONSE
FACTOR 2); protein binding / transcription factor |
chr5:24910859-24914680 FORWARD
Length = 860
Score = 100 bits (248), Expect = 2e-022
Identities = 45/86 (52%), Positives = 61/86 (70%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
+G+LA A HA ST + FTV+Y PR SPSEF++P +Y+++V S+GMRF+M FE EE
Sbjct: 284 LGVLATAWHAISTGTMFTVYYKPRTSPSEFIVPFDQYMESV-KNNYSIGMRFKMRFEGEE 342
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
+ +R+ GTI GI + DP RWP S W
Sbjct: 343 APEQRFTGTIVGIEESDPTRWPKSKW 368
>TAIR9_protein||AT5G60450.1 | Symbols: ARF4 | ARF4 (AUXIN RESPONSE FACTOR 4);
transcription factor | chr5:24308558-24312187 REVERSE
Length = 789
Score = 94 bits (233), Expect = 1e-020
Identities = 45/84 (53%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Frame = +1
Query: 7 LLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEESS 186
+L+ A+A ST S F VFY+PRA+ +EFVIP KYI ++ + V +G RFRM FE ++S
Sbjct: 298 ILSLVANAVSTKSMFHVFYSPRATHAEFVIPYEKYITSI-RSPVCIGTRFRMRFEMDDSP 356
Query: 187 VRRYMGTITGISDLDPVRWPNSHW 258
RR G +TG+ DLDP RWPNS W
Sbjct: 357 ERRCAGVVTGVCDLDPYRWPNSKW 380
>TAIR9_protein||AT2G33860.1 | Symbols: ETT, ARF3 | ETT (ETTIN); DNA binding /
transcription factor | chr2:14325444-14328613 REVERSE
Length = 609
Score = 89 bits (218), Expect = 6e-019
Identities = 42/79 (53%), Positives = 57/79 (72%), Gaps = 1/79 (1%)
Frame = +1
Query: 22 AHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEESSVRRYM 201
AHA ST+S F++ YNP+AS S F+IP K++K V + +GMRF+ E+E++S RR
Sbjct: 286 AHAISTHSVFSISYNPKASWSNFIIPAPKFLKVVDYP-FCIGMRFKARVESEDASERRSP 344
Query: 202 GTITGISDLDPVRWPNSHW 258
G I+GISDLDP+RWP S W
Sbjct: 345 GIISGISDLDPIRWPGSKW 363
>TAIR9_protein||AT1G59750.1 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 666
Score = 85 bits (208), Expect = 8e-018
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
IG+LA AAHA +T + F+VFY PR S SEF++ +++Y++A ++SVGMRF+M FE EE
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEE 302
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
+ +R+ GTI G+ + W +S W
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEW 328
>TAIR9_protein||AT1G59750.2 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 663
Score = 85 bits (208), Expect = 8e-018
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
IG+LA AAHA +T + F+VFY PR S SEF++ +++Y++A ++SVGMRF+M FE EE
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEE 302
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
+ +R+ GTI G+ + W +S W
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEW 328
>TAIR9_protein||AT1G59750.3 | Symbols: ARF1 | ARF1 (AUXIN RESPONSE FACTOR 1);
DNA binding / transcription factor | chr1:21980414-21984193 FORWARD
Length = 666
Score = 85 bits (208), Expect = 8e-018
Identities = 40/86 (46%), Positives = 60/86 (69%), Gaps = 1/86 (1%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
IG+LA AAHA +T + F+VFY PR S SEF++ +++Y++A ++SVGMRF+M FE EE
Sbjct: 244 IGVLATAAHAITTGTIFSVFYKPRTSRSEFIVSVNRYLEAKTQ-KLSVGMRFKMRFEGEE 302
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
+ +R+ GTI G+ + W +S W
Sbjct: 303 APEKRFSGTIVGVQENKSSVWHDSEW 328
>TAIR9_protein||AT4G23980.1 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 639
Score = 82 bits (202), Expect = 4e-017
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
+G+LA A HA+ T + F V+Y PR S+F+I L+KY++A+ + SVGMRF+M FE E+
Sbjct: 236 LGVLATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGED 292
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
S RRY GT+ G+ D P W +S W
Sbjct: 293 SPERRYSGTVIGVKDCSP-HWKDSKW 317
>TAIR9_protein||AT4G23980.2 | Symbols: ARF9 | ARF9 (AUXIN RESPONSE FACTOR 9);
transcription factor | chr4:12451592-12454737 FORWARD
Length = 637
Score = 82 bits (202), Expect = 4e-017
Identities = 41/86 (47%), Positives = 58/86 (67%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
+G+LA A HA+ T + F V+Y PR S+F+I L+KY++A+ + SVGMRF+M FE E+
Sbjct: 236 LGVLATARHATQTKTMFIVYYKPRT--SQFIISLNKYLEAM-SNKFSVGMRFKMRFEGED 292
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
S RRY GT+ G+ D P W +S W
Sbjct: 293 SPERRYSGTVIGVKDCSP-HWKDSKW 317
>TAIR9_protein||AT3G61830.1 | Symbols: ARF18 | ARF18 (AUXIN RESPONSE FACTOR 18);
transcription factor | chr3:22888171-22891179 FORWARD
Length = 603
Score = 76 bits (186), Expect = 3e-015
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 4/86 (4%)
Frame = +1
Query: 1 IGLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEE 180
+G+LA A+HA T + F VFY PR S+F++ ++KY++A+ H S+G RFRM FE EE
Sbjct: 248 LGVLATASHAVRTTTIFVVFYKPRI--SQFIVGVNKYMEAIKH-GFSLGTRFRMRFEGEE 304
Query: 181 SSVRRYMGTITGISDLDPVRWPNSHW 258
S R + GTI G DL +WP S W
Sbjct: 305 SPERIFTGTIVGSGDLSS-QWPASKW 329
>TAIR9_protein||AT2G28350.1 | Symbols: ARF10 | ARF10 (AUXIN RESPONSE FACTOR 10);
miRNA binding / transcription factor | chr2:12114331-12116665 FORWARD
Length = 694
Score = 70 bits (170), Expect = 2e-013
Identities = 35/86 (40%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Frame = +1
Query: 10 LAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEESS- 186
+A A ++ F V Y PRAS EF + + +++ R GMRF+M FETE+SS
Sbjct: 274 VAEAVARAACGQAFEVVYYPRASTPEFCVKAAD-VRSAMRIRWCSGMRFKMAFETEDSSR 332
Query: 187 VRRYMGTITGISDLDPVRWPNSHWHL 264
+ +MGT++ + DP+RWPNS W L
Sbjct: 333 ISWFMGTVSAVQVADPIRWPNSPWRL 358
>TAIR9_protein||AT4G30080.1 | Symbols: ARF16 | ARF16 (AUXIN RESPONSE FACTOR 16);
miRNA binding / transcription factor | chr4:14703369-14705564 REVERSE
Length = 671
Score = 66 bits (159), Expect = 4e-012
Identities = 36/83 (43%), Positives = 50/83 (60%), Gaps = 2/83 (2%)
Frame = +1
Query: 19 AAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEESS-VRR 195
AA + + F V Y PRAS SEF + + +A GMRF+M FETE+SS +
Sbjct: 279 AATLAISGRPFEVVYYPRASTSEFCVK-ALDARAAMRIPWCSGMRFKMAFETEDSSRISW 337
Query: 196 YMGTITGISDLDPVRWPNSHWHL 264
+MGT++ ++ DP+RWPNS W L
Sbjct: 338 FMGTVSAVNVSDPIRWPNSPWRL 360
>TAIR9_protein||AT1G34170.1 | Symbols: ARF13 | transcription factor |
chr1:12444265-12446764 REVERSE
Length = 506
Score = 65 bits (157), Expect = 7e-012
Identities = 35/85 (41%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Frame = +1
Query: 4 GLLAAAAHASSTNSCFTVFYNPRASPSEFVIPLSKYIKAVFHTRVSVGMRFRMLFETEES 183
G++A+ +A T F V Y P S S+FVI K++ A+ + + VG RFRM FE ++
Sbjct: 247 GVIASVVNAFKTKCMFNVVYKP--SSSQFVISYDKFVDAMNNNYI-VGSRFRMQFEGKDF 303
Query: 184 SVRRYMGTITGISDLDPVRWPNSHW 258
S +RY GTI G++D+ P W +S W
Sbjct: 304 SEKRYDGTIIGVNDMSP-HWKDSEW 327
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,638,211,360
Number of Sequences: 33410
Number of Extensions: 2638211360
Number of Successful Extensions: 136195546
Number of sequences better than 0.0: 0
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