BLASTX 7.6.2
Query= RU14395 /QuerySize=569
(568 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G03475.1 | Symbols: LIN2, HEMF1, ATCPO-I | LIN... 147 7e-036
TAIR9_protein||AT4G03205.1 | Symbols: hemf2 | coproporphyrinogen... 143 7e-035
TAIR9_protein||AT4G03205.2 | Symbols: hemf2 | coproporphyrinogen... 143 7e-035
>TAIR9_protein||AT1G03475.1 | Symbols: LIN2, HEMF1, ATCPO-I | LIN2 (LESION
INITIATION 2); coproporphyrinogen oxidase | chr1:869302-871175 REVERSE
Length = 387
Score = 147 bits (369), Expect = 7e-036
Identities = 85/138 (61%), Positives = 99/138 (71%), Gaps = 9/138 (6%)
Frame = +2
Query: 182 HSKHRSFHSAT-RFTR-LRRARSLTPRCAXXXXXXXXXXXXD-TFLRE------SSSPTS 334
H H S + +T RF+R +R +L RC+ TFLR+ SSS +S
Sbjct: 20 HRLHYSPNPSTLRFSRPIRNKPNLALRCSVSIEKEVPETERPFTFLRDSDDVTPSSSSSS 79
Query: 335 VRARFEKMIREAQDTVCEAIAAADGGGKFKEDVWSRPGGGGGISRVLQNGAVWEKAGVNV 514
VRARFE MIR AQD+VC+AI A +GG KFKEDVWSRPGGGGGISRVLQ+G V+EKAGVNV
Sbjct: 80 VRARFETMIRAAQDSVCDAIEAIEGGPKFKEDVWSRPGGGGGISRVLQDGNVFEKAGVNV 139
Query: 515 SVVYGVMPPEAYRAAKGA 568
SVVYGVMPPEAYRAAKG+
Sbjct: 140 SVVYGVMPPEAYRAAKGS 157
>TAIR9_protein||AT4G03205.1 | Symbols: hemf2 | coproporphyrinogen III oxidase,
putative / coproporphyrinogenase, putative / coprogen oxidase, putative
| chr4:1412814-1413765 FORWARD
Length = 234
Score = 143 bits (360), Expect = 7e-035
Identities = 74/95 (77%), Positives = 78/95 (82%), Gaps = 6/95 (6%)
Frame = +2
Query: 302 TFLRES------SSPTSVRARFEKMIREAQDTVCEAIAAADGGGKFKEDVWSRPGGGGGI 463
TFLR S SS SVRARFEKMIR AQD VCEAI A + G KFKEDVWSRPGGGGGI
Sbjct: 63 TFLRVSDGDQTQSSSYSVRARFEKMIRTAQDKVCEAIEAVEEGPKFKEDVWSRPGGGGGI 122
Query: 464 SRVLQNGAVWEKAGVNVSVVYGVMPPEAYRAAKGA 568
SR+LQ+G VWEKAGVNVSV+YGVMPPEAYRAAK A
Sbjct: 123 SRILQDGNVWEKAGVNVSVIYGVMPPEAYRAAKAA 157
>TAIR9_protein||AT4G03205.2 | Symbols: hemf2 | coproporphyrinogen III oxidase,
putative / coproporphyrinogenase, putative / coprogen oxidase, putative
| chr4:1412814-1413703 FORWARD
Length = 241
Score = 143 bits (360), Expect = 7e-035
Identities = 74/95 (77%), Positives = 78/95 (82%), Gaps = 6/95 (6%)
Frame = +2
Query: 302 TFLRES------SSPTSVRARFEKMIREAQDTVCEAIAAADGGGKFKEDVWSRPGGGGGI 463
TFLR S SS SVRARFEKMIR AQD VCEAI A + G KFKEDVWSRPGGGGGI
Sbjct: 63 TFLRVSDGDQTQSSSYSVRARFEKMIRTAQDKVCEAIEAVEEGPKFKEDVWSRPGGGGGI 122
Query: 464 SRVLQNGAVWEKAGVNVSVVYGVMPPEAYRAAKGA 568
SR+LQ+G VWEKAGVNVSV+YGVMPPEAYRAAK A
Sbjct: 123 SRILQDGNVWEKAGVNVSVIYGVMPPEAYRAAKAA 157
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,696,939,967
Number of Sequences: 33410
Number of Extensions: 2696939967
Number of Successful Extensions: 136271816
Number of sequences better than 0.0: 0
|