BLASTX 7.6.2
Query= RU14944 /QuerySize=252
(251 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type... 92 7e-020
TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type... 92 7e-020
TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger... 75 7e-015
TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type... 74 1e-014
TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type... 74 2e-014
TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type... 74 2e-014
TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type... 74 2e-014
TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 70 3e-013
TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 70 3e-013
TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 70 3e-013
TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE... 70 3e-013
TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type... 70 3e-013
TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type... 69 5e-013
TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONST... 67 1e-012
TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONST... 67 1e-012
TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); tr... 67 2e-012
TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); tr... 67 2e-012
TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (const... 66 3e-012
TAIR9_protein||AT1G68190.1 | Symbols: | zinc finger (B-box type... 66 4e-012
TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like... 63 4e-011
TAIR9_protein||AT4G27310.1 | Symbols: | zinc finger (B-box type... 58 1e-009
TAIR9_protein||AT4G15248.1 | Symbols: | zinc ion binding | chr4... 55 7e-009
TAIR9_protein||AT3G21150.1 | Symbols: | zinc finger (B-box type... 50 2e-007
TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type... 49 4e-007
>TAIR9_protein||AT2G47890.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609036 FORWARD
Length = 238
Score = 92 bits (226), Expect = 7e-020
Identities = 38/57 (66%), Positives = 49/57 (85%)
Frame = +2
Query: 80 KKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
++ RLCDYC S+AL+YC+ADSAKLC +CDK+VH ANQLF KH RS LCD+C+E+P+
Sbjct: 8 QRDRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPS 64
>TAIR9_protein||AT2G47890.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:19608245-19609476 FORWARD
Length = 333
Score = 92 bits (226), Expect = 7e-020
Identities = 38/57 (66%), Positives = 49/57 (85%)
Frame = +2
Query: 80 KKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
++ RLCDYC S+AL+YC+ADSAKLC +CDK+VH ANQLF KH RS LCD+C+E+P+
Sbjct: 8 QRDRLCDYCDSSVALVYCKADSAKLCLACDKQVHVANQLFAKHFRSLLCDSCNESPS 64
>TAIR9_protein||AT5G24930.1 | Symbols: ATCOL4, COL4 | zinc finger (B-box type)
family protein | chr5:8589325-8590949 FORWARD
Length = 407
Score = 75 bits (183), Expect = 7e-015
Identities = 35/83 (42%), Positives = 52/83 (62%), Gaps = 3/83 (3%)
Frame = +2
Query: 2 KEKPEQEMNGFKEEDEPGHQNMGQRKKKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVH 181
K K E+E +E+ + + +RK +LCD C + A LYCR D+A LC SCD +VH
Sbjct: 22 KRKRERETLKHREKKK---KRFRERKMASKLCDSCKSATAALYCRPDAAFLCLSCDSKVH 78
Query: 182 SANQLFIKHTRSQLCDACDEAPA 250
+AN+L +H R +C+ C++APA
Sbjct: 79 AANKLASRHARVWMCEVCEQAPA 101
>TAIR9_protein||AT1G28050.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:9775768-9777657 REVERSE
Length = 434
Score = 74 bits (181), Expect = 1e-014
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 95 CDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAP 247
CD+CG A+L+CRAD+AKLC CD++VH+AN L KH RSQ+CD C P
Sbjct: 9 CDFCGERTAVLFCRADTAKLCLPCDQQVHTANLLSRKHVRSQICDNCGNEP 59
>TAIR9_protein||AT2G33500.1 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 403
Score = 74 bits (180), Expect = 2e-014
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 95 CDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAP 247
C++CG A+L+CRAD+AKLC CD+ VHSAN L KH RSQ+CD C + P
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEP 62
>TAIR9_protein||AT2G33500.2 | Symbols: | zinc finger (B-box type) family
protein | chr2:14188159-14190046 REVERSE
Length = 402
Score = 74 bits (180), Expect = 2e-014
Identities = 30/51 (58%), Positives = 38/51 (74%)
Frame = +2
Query: 95 CDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAP 247
C++CG A+L+CRAD+AKLC CD+ VHSAN L KH RSQ+CD C + P
Sbjct: 12 CEFCGERTAVLFCRADTAKLCLPCDQHVHSANLLSRKHVRSQICDNCSKEP 62
>TAIR9_protein||AT4G15250.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:8709942-8711106 REVERSE
Length = 331
Score = 74 bits (179), Expect = 2e-014
Identities = 30/51 (58%), Positives = 37/51 (72%)
Frame = +2
Query: 95 CDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAP 247
CD+CG AL+YC++DSAKLC +CD VHSAN L +HTRS LC+ C P
Sbjct: 5 CDFCGTEKALIYCKSDSAKLCLNCDVNVHSANPLSQRHTRSLLCEKCSLQP 55
>TAIR9_protein||AT3G07650.1 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 70 bits (169), Expect = 3e-013
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +2
Query: 92 LCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
+CD+CG +++YCR+D+A LC SCD+ VHSAN L +H+R+ +C+ C+ PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>TAIR9_protein||AT3G07650.2 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 70 bits (169), Expect = 3e-013
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +2
Query: 92 LCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
+CD+CG +++YCR+D+A LC SCD+ VHSAN L +H+R+ +C+ C+ PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>TAIR9_protein||AT3G07650.3 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 70 bits (169), Expect = 3e-013
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +2
Query: 92 LCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
+CD+CG +++YCR+D+A LC SCD+ VHSAN L +H+R+ +C+ C+ PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>TAIR9_protein||AT3G07650.4 | Symbols: COL9 | COL9 (CONSTANS-LIKE 9);
transcription factor/ zinc ion binding | chr3:2442494-2443901 FORWARD
Length = 373
Score = 70 bits (169), Expect = 3e-013
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +2
Query: 92 LCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
+CD+CG +++YCR+D+A LC SCD+ VHSAN L +H+R+ +C+ C+ PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRSVHSANALSKRHSRTLVCERCNAQPA 56
>TAIR9_protein||AT5G48250.1 | Symbols: | zinc finger (B-box type) family
protein | chr5:19561719-19563113 REVERSE
Length = 374
Score = 70 bits (169), Expect = 3e-013
Identities = 26/53 (49%), Positives = 40/53 (75%)
Frame = +2
Query: 92 LCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
+CD+CG +++YCR+D+A LC SCD+ VHSAN L +H+R+ +C+ C+ PA
Sbjct: 4 MCDFCGEQRSMVYCRSDAACLCLSCDRNVHSANALSKRHSRTLVCERCNAQPA 56
>TAIR9_protein||AT3G21880.1 | Symbols: | zinc finger (B-box type) family
protein | chr3:7706748-7708093 FORWARD
Length = 365
Score = 69 bits (167), Expect = 5e-013
Identities = 28/52 (53%), Positives = 36/52 (69%)
Frame = +2
Query: 95 CDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
CD+C S AL+YC++D AKLC +CD VHSAN L +H RS +C+ C PA
Sbjct: 5 CDHCATSQALIYCKSDLAKLCLNCDVHVHSANPLSHRHIRSLICEKCFSQPA 56
>TAIR9_protein||AT2G24790.2 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567621 FORWARD
Length = 221
Score = 67 bits (163), Expect = 1e-012
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +2
Query: 89 RLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
RLCD C + A L+CRAD+A LC CD ++H+AN+L +H R LC+ C++APA
Sbjct: 6 RLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPA 59
Score = 49 bits (116), Expect = 4e-007
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +2
Query: 65 MGQRKKKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTR 214
+ R ++ LC+ C + A + C+AD+A LC +CD+++HSAN L +H R
Sbjct: 41 LASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
>TAIR9_protein||AT2G24790.1 | Symbols: COL3, ATCOL3 | COL3 (CONSTANS-LIKE 3);
protein binding / transcription factor/ zinc ion binding |
chr2:10566959-10567946 FORWARD
Length = 295
Score = 67 bits (163), Expect = 1e-012
Identities = 28/54 (51%), Positives = 39/54 (72%)
Frame = +2
Query: 89 RLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
RLCD C + A L+CRAD+A LC CD ++H+AN+L +H R LC+ C++APA
Sbjct: 6 RLCDSCKSTAATLFCRADAAFLCGDCDGKIHTANKLASRHERVWLCEVCEQAPA 59
Score = 49 bits (116), Expect = 4e-007
Identities = 20/50 (40%), Positives = 33/50 (66%)
Frame = +2
Query: 65 MGQRKKKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTR 214
+ R ++ LC+ C + A + C+AD+A LC +CD+++HSAN L +H R
Sbjct: 41 LASRHERVWLCEVCEQAPAHVTCKADAAALCVTCDRDIHSANPLSRRHER 90
>TAIR9_protein||AT5G15840.1 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171343-5172697 REVERSE
Length = 374
Score = 67 bits (162), Expect = 2e-012
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +2
Query: 83 KKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
+ R CD C + +YC ADSA LC SCD +VHSAN++ +H R ++C++C+ APA
Sbjct: 16 RARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPA 71
Score = 52 bits (123), Expect = 6e-008
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +2
Query: 65 MGQRKKKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTR 214
+ R K+ R+C+ C + A C AD A LC +CD EVHSAN L +H R
Sbjct: 53 VASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
>TAIR9_protein||AT5G15840.2 | Symbols: CO, FG | CO (CONSTANS); transcription
factor/ transcription regulator/ zinc ion binding |
chr5:5171873-5172697 REVERSE
Length = 275
Score = 67 bits (162), Expect = 2e-012
Identities = 27/56 (48%), Positives = 39/56 (69%)
Frame = +2
Query: 83 KKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
+ R CD C + +YC ADSA LC SCD +VHSAN++ +H R ++C++C+ APA
Sbjct: 16 RARPCDTCRSNACTVYCHADSAYLCMSCDAQVHSANRVASRHKRVRVCESCERAPA 71
Score = 52 bits (123), Expect = 6e-008
Identities = 23/50 (46%), Positives = 30/50 (60%)
Frame = +2
Query: 65 MGQRKKKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTR 214
+ R K+ R+C+ C + A C AD A LC +CD EVHSAN L +H R
Sbjct: 53 VASRHKRVRVCESCERAPAAFLCEADDASLCTACDSEVHSANPLARRHQR 102
>TAIR9_protein||AT5G15850.1 | Symbols: COL1, ATCOL1 | COL1 (constans-like 1);
transcription factor/ zinc ion binding | chr5:5176297-5177473 REVERSE
Length = 356
Score = 66 bits (160), Expect = 3e-012
Identities = 27/52 (51%), Positives = 37/52 (71%)
Frame = +2
Query: 95 CDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
CD C + +YCRADSA LC SCD +VH+AN+L +H R ++C +C+ APA
Sbjct: 12 CDTCRSAACTVYCRADSAYLCSSCDAQVHAANRLASRHERVRVCQSCERAPA 63
Score = 52 bits (124), Expect = 5e-008
Identities = 21/50 (42%), Positives = 32/50 (64%)
Frame = +2
Query: 65 MGQRKKKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTR 214
+ R ++ R+C C + A +C+AD+A LC +CD E+HSAN L +H R
Sbjct: 45 LASRHERVRVCQSCERAPAAFFCKADAASLCTTCDSEIHSANPLARRHQR 94
>TAIR9_protein||AT1G68190.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25559384-25561004 FORWARD
Length = 357
Score = 66 bits (159), Expect = 4e-012
Identities = 26/54 (48%), Positives = 38/54 (70%)
Frame = +2
Query: 86 KRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAP 247
+R+C++C A++YC AD+A LC +CD +VHSAN L +H R+ LCD+C P
Sbjct: 11 ERVCEFCKAYRAVVYCIADTANLCLTCDAKVHSANSLSGRHLRTVLCDSCKNQP 64
>TAIR9_protein||AT3G02380.1 | Symbols: COL2 | COL2 (constans-like 2);
transcription factor/ zinc ion binding | chr3:487438-488624 REVERSE
Length = 348
Score = 63 bits (151), Expect = 4e-011
Identities = 25/54 (46%), Positives = 36/54 (66%)
Frame = +2
Query: 89 RLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDACDEAPA 250
R CD C + +YC ADSA LC +CD VH+AN++ +H R ++C +C+ APA
Sbjct: 14 RACDTCRSAACTVYCEADSAYLCTTCDARVHAANRVASRHERVRVCQSCESAPA 67
Score = 50 bits (119), Expect = 2e-007
Identities = 21/50 (42%), Positives = 31/50 (62%)
Frame = +2
Query: 65 MGQRKKKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTR 214
+ R ++ R+C C + A C+AD+A LC +CD E+HSAN L +H R
Sbjct: 49 VASRHERVRVCQSCESAPAAFLCKADAASLCTACDAEIHSANPLARRHQR 98
>TAIR9_protein||AT4G27310.1 | Symbols: | zinc finger (B-box type) family
protein | chr4:13675853-13676616 FORWARD
Length = 224
Score = 58 bits (138), Expect = 1e-009
Identities = 25/47 (53%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 95 CDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDAC 235
CD C +A +YC +D A LC+ CD +VH AN L KHTR LC AC
Sbjct: 5 CDLCN-GVARMYCESDQASLCWDCDGKVHGANFLVAKHTRCLLCSAC 50
>TAIR9_protein||AT4G15248.1 | Symbols: | zinc ion binding |
chr4:8708881-8709234 FORWARD
Length = 118
Score = 55 bits (131), Expect = 7e-009
Identities = 30/75 (40%), Positives = 41/75 (54%), Gaps = 7/75 (9%)
Frame = +2
Query: 29 GFKEEDEPGHQNMG------QRKKKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSAN 190
GF++E+E N G + K C+ CG + A +YC AD+A LC CD+ VHSAN
Sbjct: 4 GFEKEEERRSDNGGCQRLCTESHKAPVSCELCGEN-ATVYCEADAAFLCRKCDRWVHSAN 62
Query: 191 QLFIKHTRSQLCDAC 235
L +H R +C C
Sbjct: 63 FLARRHLRRVICTTC 77
>TAIR9_protein||AT3G21150.1 | Symbols: | zinc finger (B-box type) family
protein | chr3:7412713-7413390 REVERSE
Length = 226
Score = 50 bits (119), Expect = 2e-007
Identities = 23/47 (48%), Positives = 30/47 (63%), Gaps = 1/47 (2%)
Frame = +2
Query: 95 CDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDAC 235
C+ CG A L+C ADSA LC SCD + H++N LF +H R +C C
Sbjct: 5 CELCGAE-ADLHCAADSAFLCRSCDAKFHASNFLFARHFRRVICPNC 50
>TAIR9_protein||AT1G68520.1 | Symbols: | zinc finger (B-box type) family
protein | chr1:25709331-25710749 REVERSE
Length = 407
Score = 49 bits (116), Expect = 4e-007
Identities = 25/51 (49%), Positives = 28/51 (54%)
Frame = +2
Query: 80 KKKRLCDYCGVSMALLYCRADSAKLCFSCDKEVHSANQLFIKHTRSQLCDA 232
K R CD C A YC AD A LC +CD VHSAN L +H R +L A
Sbjct: 12 KTARACDSCVKRRARWYCAADDAFLCHACDGSVHSANPLARRHERVRLKSA 62
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,726,080,741
Number of Sequences: 33410
Number of Extensions: 2726080741
Number of Successful Extensions: 136295362
Number of sequences better than 0.0: 0
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