BLASTX 7.6.2
Query= RU15186 /QuerySize=448
(447 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcri... 178 2e-045
TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription... 156 7e-039
TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SC... 153 7e-038
TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription... 150 4e-037
TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription... 148 2e-036
TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription... 148 2e-036
TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription... 148 2e-036
TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcri... 147 3e-036
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 85 1e-017
TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a... 85 2e-017
TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a... 85 2e-017
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 81 2e-016
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 78 2e-015
TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcri... 73 6e-014
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 72 1e-013
TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE... 70 5e-013
TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROT... 67 5e-012
TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSO... 65 2e-011
TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELL... 64 3e-011
TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription... 52 2e-007
>TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 719
Score = 178 bits (449), Expect = 2e-045
Identities = 80/124 (64%), Positives = 97/124 (78%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F FREALFHFS++FDML+ VPR+ ERM +E E+FGREA+NVIACEG ER+ERPE
Sbjct: 590 PFFVTRFREALFHFSSIFDMLETIVPREDEERMFLEMEVFGREALNVIACEGWERVERPE 649
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYAL 367
TYKQW VR R+GL Q+P + IM + ++H +YHKDFVID+D RWLLQGWKGR V AL
Sbjct: 650 TYKQWHVRAMRSGLVQVPFDPSIMKTSLHKVHTFYHKDFVIDQDNRWLLQGWKGRTVMAL 709
Query: 368 SSWR 379
S W+
Sbjct: 710 SVWK 713
>TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1337
Score = 156 bits (393), Expect = 7e-039
Identities = 71/128 (55%), Positives = 93/128 (72%), Gaps = 1/128 (0%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F F+EA++H+S LFDM D +PRD ER+ ERE +GREAMNVIACE ++R+ERPE
Sbjct: 1210 PFFISRFKEAVYHYSALFDMFDSTLPRDNKERIRFEREFYGREAMNVIACEEADRVERPE 1269
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAY-YHKDFVIDEDGRWLLQGWKGRIVYA 364
TY+QWQVR RAG Q + E++ + + +L + YHKDFV+DE+ +WLLQGWKGR +YA
Sbjct: 1270 TYRQWQVRMVRAGFKQKTIKPELVELFRGKLKKWRYHKDFVVDENSKWLLQGWKGRTLYA 1329
Query: 365 LSSWRAA* 388
S W A*
Sbjct: 1330 SSCWVPA* 1337
Score = 147 bits (369), Expect = 4e-036
Identities = 68/124 (54%), Positives = 89/124 (71%), Gaps = 1/124 (0%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F FRE LFH+S+LFDM D + R+ P R++ E+E +GRE MNV+ACEG+ER+ERPE
Sbjct: 568 PFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVMFEKEFYGREIMNVVACEGTERVERPE 627
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHA-YYHKDFVIDEDGRWLLQGWKGRIVYA 364
+YKQWQ R RAG Q+PL +E++ K + + Y K+F +D+D WLLQGWKGRIVY
Sbjct: 628 SYKQWQARAMRAGFRQIPLEKELVQKLKLMVESGYKPKEFDVDQDCHWLLQGWKGRIVYG 687
Query: 365 LSSW 376
S W
Sbjct: 688 SSIW 691
>TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor | chr1:2313828-2316137
REVERSE
Length = 770
Score = 153 bits (384), Expect = 7e-038
Identities = 70/123 (56%), Positives = 90/123 (73%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F FREALFH+S +FDM D + R+ R++ E+E +GRE +NV+ACEG+ER+ERPE
Sbjct: 642 PFFVTRFREALFHYSAVFDMCDSKLAREDEMRLMYEKEFYGREIVNVVACEGTERVERPE 701
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYAL 367
TYKQWQ R RAG QLPL +E+M K ++ Y K+F +D++G WLLQGWKGRIVYA
Sbjct: 702 TYKQWQARLIRAGFRQLPLEKELMQNLKLKIENGYDKNFDVDQNGNWLLQGWKGRIVYAS 761
Query: 368 SSW 376
S W
Sbjct: 762 SLW 764
>TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 696
Score = 150 bits (378), Expect = 4e-037
Identities = 67/124 (54%), Positives = 90/124 (72%), Gaps = 1/124 (0%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F F+EALFH+S LFD+ + ++ PER+ E E +GRE MNVIACEG +R+ERPE
Sbjct: 569 PFFTTRFKEALFHYSALFDLFGATLSKENPERIHFEGEFYGREVMNVIACEGVDRVERPE 628
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAY-YHKDFVIDEDGRWLLQGWKGRIVYA 364
TYKQWQVR RAG Q P+ E++ + ++++ + YHKDFV+DED W LQGWKGRI+++
Sbjct: 629 TYKQWQVRMIRAGFKQKPVEAELVQLFREKMKKWGYHKDFVLDEDSNWFLQGWKGRILFS 688
Query: 365 LSSW 376
S W
Sbjct: 689 SSCW 692
>TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 584
Score = 148 bits (371), Expect = 2e-036
Identities = 70/126 (55%), Positives = 88/126 (69%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F FREALFH S+LFDM + + D R L+ERE+ R+AM+VIACEGSER RPE
Sbjct: 456 PFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPE 515
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYAL 367
TYKQWQVR RAG L+++I+ K+ + YHKDFVID D W+ QGWKGR++YA+
Sbjct: 516 TYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAV 575
Query: 368 SSWRAA 385
S W+ A
Sbjct: 576 SCWKPA 581
>TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 454
Score = 148 bits (371), Expect = 2e-036
Identities = 70/126 (55%), Positives = 88/126 (69%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F FREALFH S+LFDM + + D R L+ERE+ R+AM+VIACEGSER RPE
Sbjct: 326 PFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPE 385
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYAL 367
TYKQWQVR RAG L+++I+ K+ + YHKDFVID D W+ QGWKGR++YA+
Sbjct: 386 TYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAV 445
Query: 368 SSWRAA 385
S W+ A
Sbjct: 446 SCWKPA 451
>TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 552
Score = 148 bits (371), Expect = 2e-036
Identities = 70/126 (55%), Positives = 88/126 (69%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F FREALFH S+LFDM + + D R L+ERE+ R+AM+VIACEGSER RPE
Sbjct: 424 PFFLTRFREALFHCSSLFDMYETTLSEDDNCRTLVERELIIRDAMSVIACEGSERFARPE 483
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYAL 367
TYKQWQVR RAG L+++I+ K+ + YHKDFVID D W+ QGWKGR++YA+
Sbjct: 484 TYKQWQVRILRAGFRPAKLSKQIVKDGKEIVKERYHKDFVIDNDNHWMFQGWKGRVLYAV 543
Query: 368 SSWRAA 385
S W+ A
Sbjct: 544 SCWKPA 549
>TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 611
Score = 147 bits (370), Expect = 3e-036
Identities = 68/128 (53%), Positives = 90/128 (70%), Gaps = 2/128 (1%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCV--PRDIPERMLIEREIFGREAMNVIACEGSERIER 181
P F FREALFH+S+LFDM D + + R L+ERE+ R+AM+VI+CEG+ER R
Sbjct: 473 PFFMTRFREALFHYSSLFDMFDTTIHAEDEYKNRSLLERELLVRDAMSVISCEGAERFAR 532
Query: 182 PETYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVY 361
PETYKQW+VR RAG ++++IM AK+ + YH+DFVID D W+LQGWKGR++Y
Sbjct: 533 PETYKQWRVRILRAGFKPATISKQIMKEAKEIVRKRYHRDFVIDSDNNWMLQGWKGRVIY 592
Query: 362 ALSSWRAA 385
A S W+ A
Sbjct: 593 AFSCWKPA 600
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 85 bits (209), Expect = 1e-017
Identities = 41/122 (33%), Positives = 70/122 (57%)
Frame = +2
Query: 14 FFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPETY 193
FF F EA ++S +F+ LDM +PR+ ERM +ER+ R+ +N++ACEG ERIER E
Sbjct: 472 FFPRFIEAYEYYSAVFESLDMTLPRESQERMNVERQCLARDIVNIVACEGEERIERYEAA 531
Query: 194 KQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYALSS 373
+W+ R AG P++ ++ + ++ + Y + + E+ L W+ + + S+
Sbjct: 532 GKWRARMMMAGFNPKPMSAKVTNNIQNLIKQQYCNKYKLKEEMGELHFCWEEKSLIVASA 591
Query: 374 WR 379
WR
Sbjct: 592 WR 593
>TAIR9_protein||AT5G48150.1 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 85 bits (208), Expect = 2e-017
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +2
Query: 11 SFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPET 190
+FF F E + +++ +F+ +D+ +PRD +R+ +E+ R+ +N+IACEG++R+ER E
Sbjct: 369 AFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHEL 428
Query: 191 YKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYALS 370
+W+ R AG T PL+ + S K L Y K + + DG L GW R + A
Sbjct: 429 LGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGA-LYLGWMHRDLVASC 487
Query: 371 SWR 379
+W+
Sbjct: 488 AWK 490
>TAIR9_protein||AT5G48150.2 | Symbols: PAT1 | PAT1 (phytochrome a signal
transduction 1); signal transducer/ transcription factor |
chr5:19522497-19524053 REVERSE
Length = 491
Score = 85 bits (208), Expect = 2e-017
Identities = 42/123 (34%), Positives = 71/123 (57%), Gaps = 1/123 (0%)
Frame = +2
Query: 11 SFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPET 190
+FF F E + +++ +F+ +D+ +PRD +R+ +E+ R+ +N+IACEG++R+ER E
Sbjct: 369 AFFPRFMETMNYYAAMFESIDVTLPRDHKQRINVEQHCLARDVVNIIACEGADRVERHEL 428
Query: 191 YKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYALS 370
+W+ R AG T PL+ + S K L Y K + + DG L GW R + A
Sbjct: 429 LGKWRSRFGMAGFTPYPLSPLVNSTIKSLLRNYSDKYRLEERDGA-LYLGWMHRDLVASC 487
Query: 371 SWR 379
+W+
Sbjct: 488 AWK 490
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 81 bits (199), Expect = 2e-016
Identities = 42/122 (34%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Frame = +2
Query: 14 FFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPETY 193
F F E L +++ +F+ +D+ +PR+ ER+ IE+ R+ +N+IACEG+ERIER E
Sbjct: 293 FLPRFLETLSYYTAMFESIDVMLPRNHKERINIEQHCMARDVVNIIACEGAERIERHELL 352
Query: 194 KQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYALSS 373
+W+ R AG PL+ I + + L Y + + + DG L GW RI+ + +
Sbjct: 353 GKWKSRFSMAGFEPYPLSSIISATIRALLRDYSNGYAIEERDGA-LYLGWMDRILVSSCA 411
Query: 374 WR 379
W+
Sbjct: 412 WK 413
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 78 bits (191), Expect = 2e-015
Identities = 42/122 (34%), Positives = 65/122 (53%), Gaps = 1/122 (0%)
Frame = +2
Query: 14 FFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPETY 193
F F E + H+ +F+ +D+ + RD ER+ +E+ RE +N+IACEG ER ER E
Sbjct: 477 FLPRFVETMNHYLAVFESIDVKLARDHKERINVEQHCLAREVVNLIACEGVEREERHEPL 536
Query: 194 KQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYALSS 373
+W+ R AG PL+ + + K L +Y K + + DG L GWK + + +
Sbjct: 537 GKWRSRFHMAGFKPYPLSSYVNATIKGLLESYSEKYTLEERDGA-LYLGWKNQPLITSCA 595
Query: 374 WR 379
WR
Sbjct: 596 WR 597
>TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 641
Score = 73 bits (178), Expect = 6e-014
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 2/111 (1%)
Frame = +2
Query: 47 FSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPETYKQWQVRNRRAG 226
+ L + ++ VP +R +E I GR+ +N +ACEG +RIER E + +W++R AG
Sbjct: 532 YGALLESVESTVPSTNSDRAKVEEGI-GRKLVNAVACEGIDRIERCEVFGKWRMRMSMAG 590
Query: 227 LTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYALSSWR 379
+PL+++I K R + H F + ED + GW GR + S+WR
Sbjct: 591 FELMPLSEKIAESMKSRGNR-VHPGFTVKEDNGGVCFGWMGRALTVASAWR 640
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 72 bits (175), Expect = 1e-013
Identities = 41/122 (33%), Positives = 63/122 (51%), Gaps = 1/122 (0%)
Frame = +2
Query: 14 FFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPETY 193
F F E L +++ +F+ +D PRD +R+ E+ R+ +N+IACE SER+ER E
Sbjct: 405 FLSRFVETLDYYTAMFESIDAARPRDDKQRISAEQHCVARDIVNMIACEESERVERHEVL 464
Query: 194 KQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKDFVIDEDGRWLLQGWKGRIVYALSS 373
W+VR AG T P++ A + L A Y K++ + L WK R + S
Sbjct: 465 GIWRVRMMMAGFTGWPVSTSAAFAASEMLKA-YDKNYKLGGHEGALYLFWKRRPMATCSV 523
Query: 374 WR 379
W+
Sbjct: 524 WK 525
>TAIR9_protein||AT1G66350.1 | Symbols: RGL1, RGL | RGL1 (RGA-LIKE 1);
transcription factor | chr1:24748327-24749862 FORWARD
Length = 512
Score = 70 bits (170), Expect = 5e-013
Identities = 42/124 (33%), Positives = 66/124 (53%), Gaps = 7/124 (5%)
Frame = +2
Query: 14 FFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIF-GREAMNVIACEGSERIERPET 190
F F E+L ++S+LFD L+ P + + E+F GR+ +N++ACEG +R+ER ET
Sbjct: 388 FLDRFTESLHYYSSLFDSLE-----GPPSQDRVMSELFLGRQILNLVACEGEDRVERHET 442
Query: 191 YKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKD-FVIDEDGRWLLQGWKGRIVYAL 367
QW+ R G + + A L Y D + ++E+ LL GW+ R + A
Sbjct: 443 LNQWRNRFGLGGFKPVSIGSNAYKQASMLLALYAGADGYNVEENEGCLLLGWQTRPLIAT 502
Query: 368 SSWR 379
S+WR
Sbjct: 503 SAWR 506
>TAIR9_protein||AT5G17490.1 | Symbols: RGL3 | RGL3 (RGA-LIKE PROTEIN 3);
transcription factor | chr5:5764316-5765887 REVERSE
Length = 524
Score = 67 bits (161), Expect = 5e-012
Identities = 43/126 (34%), Positives = 69/126 (54%), Gaps = 4/126 (3%)
Frame = +2
Query: 14 FFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIF-GREAMNVIACEGSERIERPET 190
F F EAL ++S+LFD L+ V IP + + E++ GR+ +N++A EGS+RIER ET
Sbjct: 395 FLDRFNEALHYYSSLFDSLEDGVV--IPSQDRVMSEVYLGRQILNLVATEGSDRIERHET 452
Query: 191 YKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYHKD-FVIDEDGRWLLQGWKGRIVYAL 367
QW+ R AG + L + A L D + ++E+ L+ W+ + + A
Sbjct: 453 LAQWRKRMGSAGFDPVNLGSDAFKQASLLLALSGGGDGYRVEENDGSLMLAWQTKPLIAA 512
Query: 368 SSWRAA 385
S+W+ A
Sbjct: 513 SAWKLA 518
>TAIR9_protein||AT2G01570.1 | Symbols: RGA1, RGA | RGA1 (REPRESSOR OF GA1-3 1);
protein binding / transcription factor | chr2:255581-257344 REVERSE
Length = 588
Score = 65 bits (157), Expect = 2e-011
Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 4/125 (3%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F F E+L ++STLFD L+ VP + ++ G++ N++ACEG +R+ER E
Sbjct: 460 PVFLDRFTESLHYYSTLFDSLE-GVPNS--QDKVMSEVYLGKQICNLVACEGPDRVERHE 516
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYYH-KDFVIDEDGRWLLQGWKGRIVYA 364
T QW R +GL L A L + + + ++E L+ GW R +
Sbjct: 517 TLSQWGNRFGSSGLAPAHLGSNAFKQASMLLSVFNSGQGYRVEESNGCLMLGWHTRPLIT 576
Query: 365 LSSWR 379
S+W+
Sbjct: 577 TSAWK 581
>TAIR9_protein||AT1G14920.1 | Symbols: GAI, RGA2 | GAI (GIBBERELLIC ACID
INSENSITIVE); transcription factor | chr1:5149414-5151015 FORWARD
Length = 534
Score = 64 bits (155), Expect = 3e-011
Identities = 39/125 (31%), Positives = 63/125 (50%), Gaps = 4/125 (3%)
Frame = +2
Query: 8 PSFFQDFREALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPE 187
P F F E+L ++STLFD L+ VP + ++ G++ NV+AC+G +R+ER E
Sbjct: 408 PIFLDRFTESLHYYSTLFDSLE-GVPSG--QDKVMSEVYLGKQICNVVACDGPDRVERHE 464
Query: 188 TYKQWQVRNRRAGLTQLPLNQEIMSIAKDRLHAYY-HKDFVIDEDGRWLLQGWKGRIVYA 364
T QW+ R AG + A L + + + ++E L+ GW R + A
Sbjct: 465 TLSQWRNRFGSAGFAAAHIGSNAFKQASMLLALFNGGEGYRVEESDGCLMLGWHTRPLIA 524
Query: 365 LSSWR 379
S+W+
Sbjct: 525 TSAWK 529
>TAIR9_protein||AT1G63100.1 | Symbols: | scarecrow transcription factor family
protein | chr1:23399391-23401367 REVERSE
Length = 659
Score = 52 bits (122), Expect = 2e-007
Identities = 26/85 (30%), Positives = 46/85 (54%)
Frame = +2
Query: 35 ALFHFSTLFDMLDMCVPRDIPERMLIEREIFGREAMNVIACEGSERIERPETYKQWQVRN 214
+L ++S +FD + + D R+ +E +FGRE N++ACEGS R ER ++ W+
Sbjct: 527 SLKYYSAMFDAIHTNLATDSLMRVKVEEMLFGREIRNIVACEGSHRQERHVGFRHWRRML 586
Query: 215 RRAGLTQLPLNQEIMSIAKDRLHAY 289
+ G L +++ + +K L Y
Sbjct: 587 EQLGFRSLGVSEREVLQSKMLLRMY 611
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,786,097,356
Number of Sequences: 33410
Number of Extensions: 2786097356
Number of Successful Extensions: 141287952
Number of sequences better than 0.0: 0
|