BLASTX 7.6.2
Query= RU15953 /QuerySize=290
(289 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcri... 106 5e-024
TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIK... 57 2e-009
TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription... 45 6e-006
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 45 9e-006
>TAIR9_protein||AT5G52510.1 | Symbols: | scarecrow-like transcription factor 8
(SCL8) | chr5:21307196-21309118 FORWARD
Length = 641
Score = 106 bits (262), Expect = 5e-024
Identities = 49/71 (69%), Positives = 54/71 (76%), Gaps = 3/71 (4%)
Frame = +1
Query: 46 ERCEVFGKWRARMGMAGFELRRMSQSVTESLGHGPFSGNRVHPGFTVKEENGTVCFGWKS 225
ERCEVFGKWR RM MAGFEL +S+ + ES+ GNRVHPGFTVKE+NG VCFGW
Sbjct: 574 ERCEVFGKWRMRMSMAGFELMPLSEKIAESM---KSRGNRVHPGFTVKEDNGGVCFGWMG 630
Query: 226 RTLTVASAWR* 258
R LTVASAWR*
Sbjct: 631 RALTVASAWR* 641
>TAIR9_protein||AT1G21450.1 | Symbols: SCL1 | SCL1 (SCARECROW-LIKE 1);
transcription factor | chr1:7509721-7511502 FORWARD
Length = 594
Score = 57 bits (135), Expect = 2e-009
Identities = 31/71 (43%), Positives = 42/71 (59%), Gaps = 2/71 (2%)
Frame = +1
Query: 46 ERCEVFGKWRARMGMAGFELRRMSQSVTESLGHGPFSGNRVHPGFTVKEENGTVCFGWKS 225
ER E GKWRARM MAGF + MS VT ++ + + + +KEE G + F W+
Sbjct: 526 ERYEAAGKWRARMMMAGFNPKPMSAKVTNNIQN--LIKQQYCNKYKLKEEMGELHFCWEE 583
Query: 226 RTLTVASAWR* 258
++L VASAWR*
Sbjct: 584 KSLIVASAWR* 594
>TAIR9_protein||AT1G50600.1 | Symbols: SCL5 | SCL5; transcription factor |
chr1:18737398-18739547 REVERSE
Length = 598
Score = 45 bits (106), Expect = 6e-006
Identities = 25/71 (35%), Positives = 38/71 (53%), Gaps = 3/71 (4%)
Frame = +1
Query: 46 ERCEVFGKWRARMGMAGFELRRMSQSVTESLGHGPFSGNRVHPGFTVKEENGTVCFGWKS 225
ER E GKWR+R MAGF+ +S V ++ G +T++E +G + GWK+
Sbjct: 531 ERHEPLGKWRSRFHMAGFKPYPLSSYVNATI-KGLLES--YSEKYTLEERDGALYLGWKN 587
Query: 226 RTLTVASAWR* 258
+ L + AWR*
Sbjct: 588 QPLITSCAWR* 598
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 45 bits (104), Expect = 9e-006
Identities = 23/71 (32%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Frame = +1
Query: 46 ERCEVFGKWRARMGMAGFELRRMSQSVTESLGH--GPFSGNRVHPGFTVKEENGTVCFGW 219
ER E+ GKW++R MAGFE +S ++ ++ +S G+ ++E +G + GW
Sbjct: 347 ERHELLGKWKSRFSMAGFEPYPLSSIISATIRALLRDYSN-----GYAIEERDGALYLGW 401
Query: 220 KSRTLTVASAW 252
R L + AW
Sbjct: 402 MDRILVSSCAW 412
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,907,128,508
Number of Sequences: 33410
Number of Extensions: 2907128508
Number of Successful Extensions: 151337332
Number of sequences better than 0.0: 0
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