BLASTX 7.6.2
Query= RU16494 /QuerySize=269
(268 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G41560.1 | Symbols: | FUNCTIONS IN: molecular... 96 4e-021
>TAIR9_protein||AT5G41560.1 | Symbols: | FUNCTIONS IN: molecular_function
unknown; INVOLVED IN: biological_process unknown; LOCATED IN:
chloroplast; EXPRESSED IN: 24 plant structures; EXPRESSED DURING: 15
growth stages; CONTAINS InterPro DOMAIN/s: Ubiquitin ligase,
Det1/DDB1-complexing (InterPro:IPR018276); Has 59 Blast hits to 59
proteins in 19 species: Archae - 0; Bacteria - 0; Metazoa - 46; Fungi -
0; Plants - 13; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink).
| chr5:16621427-16622619 REVERSE
Length = 102
Score = 96 bits (237), Expect = 4e-021
Identities = 42/53 (79%), Positives = 46/53 (86%)
Frame = +2
Query: 80 MGSLFGNWPSYDPHNFSQLRPSDPTNPSKMTPTTYHATHNRTLPPPDQVITTE 238
M S+ G+ PS+DPHNFSQ RPSDP+NPSKM PTTY THNRTLPPPDQVITTE
Sbjct: 1 MASILGDLPSFDPHNFSQHRPSDPSNPSKMVPTTYRPTHNRTLPPPDQVITTE 53
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,965,511,112
Number of Sequences: 33410
Number of Extensions: 2965511112
Number of Successful Extensions: 156293481
Number of sequences better than 0.0: 0
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