BLASTX 7.6.2
Query= RU16737 /QuerySize=517
(516 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G07610.1 | Symbols: | F-box family protein | ... 54 4e-008
TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein | ... 51 4e-007
TAIR9_protein||AT1G50870.1 | Symbols: | F-box family protein | ... 50 9e-007
TAIR9_protein||AT1G48060.1 | Symbols: | F-box family protein | ... 50 9e-007
TAIR9_protein||AT1G47765.1 | Symbols: | F-box family protein | ... 49 1e-006
TAIR9_protein||AT1G47300.1 | Symbols: | F-box family protein | ... 48 3e-006
TAIR9_protein||AT2G40910.2 | Symbols: | F-box protein-related |... 48 3e-006
TAIR9_protein||AT2G16810.1 | Symbols: | F-box family protein (F... 48 3e-006
TAIR9_protein||AT2G40910.1 | Symbols: | F-box protein-related |... 48 3e-006
TAIR9_protein||AT3G10240.1 | Symbols: | F-box protein-related |... 47 4e-006
TAIR9_protein||AT2G40925.1 | Symbols: | F-box family protein | ... 47 8e-006
TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein | ... 46 1e-005
>TAIR9_protein||AT5G07610.1 | Symbols: | F-box family protein |
chr5:2406068-2407330 FORWARD
Length = 421
Score = 54 bits (129), Expect = 4e-008
Identities = 34/86 (39%), Positives = 50/86 (58%), Gaps = 1/86 (1%)
Frame = +3
Query: 222 SSSSSLAECDELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNTPISAV 401
SS++ +A+ D++L +IL +P L+RFK VSK WLSLI++P F +R N PIS
Sbjct: 26 SSATIVADIDDVLIQILSFLPIKTLLRFKRVSKRWLSLITNPVFSNRVIKSNHPLPISGF 85
Query: 402 FRDTSHP-PFCFVLLPLDDHHTRSSN 476
F + + FV L D + R S+
Sbjct: 86 FLHSPREIKYSFVSLDDDATNQRISS 111
>TAIR9_protein||AT3G52320.1 | Symbols: | F-box family protein |
chr3:19403020-19404192 REVERSE
Length = 391
Score = 51 bits (120), Expect = 4e-007
Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 5/85 (5%)
Frame = +3
Query: 249 DELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNTPISAVFRDTSHPPF 428
+E+L +IL+R+PA L+RFKCVSK WLSLI+ F +R + + + A D +
Sbjct: 29 EEMLIDILIRLPAKSLMRFKCVSKLWLSLITSRYFTNRFFKPSSPSCLFAYLVDRENQSK 88
Query: 429 CFVLLPLDDHHTRSSNHDNQNPSGS 503
+L + SS HD+ + S S
Sbjct: 89 YLLL-----QSSSSSRHDHSDTSVS 108
>TAIR9_protein||AT1G50870.1 | Symbols: | F-box family protein |
chr1:18855147-18856337 FORWARD
Length = 397
Score = 50 bits (117), Expect = 9e-007
Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 4/74 (5%)
Frame = +3
Query: 252 ELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNTPISAVFRDTSHPPFC 431
+L+ EIL+R+P ++RF+CVSK WLS +DP F + + ++ P +F F
Sbjct: 34 DLILEILLRLPVKSVLRFRCVSKLWLSTTTDPYFTNSYEARSSTRPSLLMFFKNKDKLFV 93
Query: 432 FVLLPLDDHHTRSS 473
F HH ++S
Sbjct: 94 FTF----PHHNQNS 103
>TAIR9_protein||AT1G48060.1 | Symbols: | F-box family protein |
chr1:17728295-17729448 FORWARD
Length = 354
Score = 50 bits (117), Expect = 9e-007
Identities = 23/47 (48%), Positives = 33/47 (70%)
Frame = +3
Query: 213 KRCSSSSSLAECDELLTEILVRVPATPLVRFKCVSKHWLSLISDPKF 353
KR SSSSL+ ++ T+I +R+PA +VRF CV+KHW S+ + P F
Sbjct: 4 KRSKSSSSLSIPLDIATDIFLRLPAKSVVRFSCVAKHWSSITTAPYF 50
>TAIR9_protein||AT1G47765.1 | Symbols: | F-box family protein |
chr1:17574906-17576092 REVERSE
Length = 386
Score = 49 bits (116), Expect = 1e-006
Identities = 24/64 (37%), Positives = 38/64 (59%)
Frame = +3
Query: 213 KRCSSSSSLAECDELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNTPI 392
KR S S+ + +L +EIL+R+P + RF+CVSK WLS+ +DP F + ++P +
Sbjct: 16 KRTQSKSASSLPLDLTSEILLRLPEKSIARFRCVSKLWLSITTDPYFINLFETRSPRPSL 75
Query: 393 SAVF 404
F
Sbjct: 76 LVCF 79
>TAIR9_protein||AT1G47300.1 | Symbols: | F-box family protein |
chr1:17339561-17340972 REVERSE
Length = 307
Score = 48 bits (113), Expect = 3e-006
Identities = 29/82 (35%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Frame = +3
Query: 252 ELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNTPISAVFRDTSHPPFC 431
EL+ EI++R+PA + RF CVSK W S++S P F L + +T +F + +C
Sbjct: 9 ELILEIMLRLPAKSIARFHCVSKQWASMLSRPYFTELF-LTSSSTQPRLLFAIKRNGLWC 67
Query: 432 FVLLPLDDHHTRSSNHDNQNPS 497
F LP S +DN + S
Sbjct: 68 FFSLP-----KHQSPYDNSSSS 84
>TAIR9_protein||AT2G40910.2 | Symbols: | F-box protein-related |
chr2:17069938-17071501 REVERSE
Length = 443
Score = 48 bits (112), Expect = 3e-006
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +3
Query: 252 ELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCH 359
+LL EI++R+PA +VRFKC+SK W SLIS FC+
Sbjct: 65 DLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCN 100
>TAIR9_protein||AT2G16810.1 | Symbols: | F-box family protein (FBX8) |
chr2:7287944-7288831 REVERSE
Length = 296
Score = 48 bits (112), Expect = 3e-006
Identities = 23/51 (45%), Positives = 34/51 (66%), Gaps = 1/51 (1%)
Frame = +3
Query: 252 ELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCHRHTLQNPNTPISAVF 404
+LL EIL R+P ++RFKCVSK W SL+S FC+R + P+ P +++
Sbjct: 44 DLLIEILTRLPPKSVMRFKCVSKFWSSLLSSRYFCNRFLIV-PSQPQPSLY 93
>TAIR9_protein||AT2G40910.1 | Symbols: | F-box protein-related |
chr2:17069938-17071554 REVERSE
Length = 450
Score = 48 bits (112), Expect = 3e-006
Identities = 21/36 (58%), Positives = 28/36 (77%)
Frame = +3
Query: 252 ELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCH 359
+LL EI++R+PA +VRFKC+SK W SLIS FC+
Sbjct: 72 DLLMEIVMRLPAKSMVRFKCISKQWSSLISCRYFCN 107
>TAIR9_protein||AT3G10240.1 | Symbols: | F-box protein-related |
chr3:3166698-3167867 FORWARD
Length = 390
Score = 47 bits (111), Expect = 4e-006
Identities = 28/68 (41%), Positives = 42/68 (61%), Gaps = 2/68 (2%)
Frame = +3
Query: 180 EKSKM-ALRFYPKRCSSSSSLAECDELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFC 356
EK K+ A + KR S SS D L++EIL+R+P + RF+CVSK W S+ ++P F
Sbjct: 6 EKRKIKAYQRKSKRSKSGSSSIPLD-LVSEILLRLPEKSVARFRCVSKPWSSITTEPYFI 64
Query: 357 HRHTLQNP 380
+ T ++P
Sbjct: 65 NLLTTRSP 72
>TAIR9_protein||AT2G40925.1 | Symbols: | F-box family protein |
chr2:17074905-17076116 REVERSE
Length = 404
Score = 47 bits (109), Expect = 8e-006
Identities = 20/37 (54%), Positives = 26/37 (70%)
Frame = +3
Query: 252 ELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCHR 362
+L+ EIL+R+P +RFKCVSK W LIS FC+R
Sbjct: 30 DLMIEILIRLPTKSFMRFKCVSKQWSPLISGRYFCNR 66
>TAIR9_protein||AT1G47790.1 | Symbols: | F-box family protein |
chr1:17600004-17601173 REVERSE
Length = 390
Score = 46 bits (108), Expect = 1e-005
Identities = 20/42 (47%), Positives = 30/42 (71%)
Frame = +3
Query: 252 ELLTEILVRVPATPLVRFKCVSKHWLSLISDPKFCHRHTLQN 377
+L +EIL+R+P +VRF+CVSK W S+I+DP F + Q+
Sbjct: 28 DLASEILLRLPVKSVVRFRCVSKLWSSIITDPYFIKTYETQS 69
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,965,511,112
Number of Sequences: 33410
Number of Extensions: 2965511112
Number of Successful Extensions: 156293481
Number of sequences better than 0.0: 0
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