BLASTX 7.6.2
Query= RU16852 /QuerySize=243
(242 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G03415.1 | Symbols: DPB, ATDPB | DPB; protein ... 149 5e-037
TAIR9_protein||AT5G02470.1 | Symbols: DPA | DPA; transcription f... 98 1e-021
TAIR9_protein||AT5G02470.2 | Symbols: DPA | DPA; transcription f... 98 1e-021
TAIR9_protein||AT5G02470.3 | Symbols: DPA | DPA; transcription f... 98 1e-021
>TAIR9_protein||AT5G03415.1 | Symbols: DPB, ATDPB | DPB; protein binding /
protein heterodimerization | chr5:842842-845200 FORWARD
Length = 386
Score = 149 bits (374), Expect = 5e-037
Identities = 74/80 (92%), Positives = 76/80 (95%)
Frame = +1
Query: 1 MKVCEKVESKGRTTYNEVADELVAEFSDPINGVTSPDQQQYDEKNIRRRVYDALNVLMAM 180
MKVCEKVESKGRTTYNEVADELVAEF+ P N TSPDQQQYDEKNIRRRVYDALNVLMAM
Sbjct: 109 MKVCEKVESKGRTTYNEVADELVAEFALPNNDGTSPDQQQYDEKNIRRRVYDALNVLMAM 168
Query: 181 DIISKDKKEIQWKGLPRTSL 240
DIISKDKKEIQW+GLPRTSL
Sbjct: 169 DIISKDKKEIQWRGLPRTSL 188
>TAIR9_protein||AT5G02470.1 | Symbols: DPA | DPA; transcription factor |
chr5:542562-544423 REVERSE
Length = 293
Score = 98 bits (242), Expect = 1e-021
Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = +1
Query: 7 VCEKVESKGRTTYNEVADELVAEFSDPINGVTSP-DQQQYDEKNIRRRVYDALNVLMAMD 183
VC+K+E+K TTY EVADE++++F+ P ++ +Y+EKNIRRRVYDALNV MA+D
Sbjct: 61 VCQKLEAKKITTYKEVADEIISDFATIKQNAEKPLNENEYNEKNIRRRVYDALNVFMALD 120
Query: 184 IISKDKKEIQWKGLPRT 234
II++DKKEI+WKGLP T
Sbjct: 121 IIARDKKEIRWKGLPIT 137
>TAIR9_protein||AT5G02470.2 | Symbols: DPA | DPA; transcription factor |
chr5:542562-544423 REVERSE
Length = 293
Score = 98 bits (242), Expect = 1e-021
Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = +1
Query: 7 VCEKVESKGRTTYNEVADELVAEFSDPINGVTSP-DQQQYDEKNIRRRVYDALNVLMAMD 183
VC+K+E+K TTY EVADE++++F+ P ++ +Y+EKNIRRRVYDALNV MA+D
Sbjct: 61 VCQKLEAKKITTYKEVADEIISDFATIKQNAEKPLNENEYNEKNIRRRVYDALNVFMALD 120
Query: 184 IISKDKKEIQWKGLPRT 234
II++DKKEI+WKGLP T
Sbjct: 121 IIARDKKEIRWKGLPIT 137
>TAIR9_protein||AT5G02470.3 | Symbols: DPA | DPA; transcription factor |
chr5:542562-544423 REVERSE
Length = 293
Score = 98 bits (242), Expect = 1e-021
Identities = 46/77 (59%), Positives = 62/77 (80%), Gaps = 1/77 (1%)
Frame = +1
Query: 7 VCEKVESKGRTTYNEVADELVAEFSDPINGVTSP-DQQQYDEKNIRRRVYDALNVLMAMD 183
VC+K+E+K TTY EVADE++++F+ P ++ +Y+EKNIRRRVYDALNV MA+D
Sbjct: 61 VCQKLEAKKITTYKEVADEIISDFATIKQNAEKPLNENEYNEKNIRRRVYDALNVFMALD 120
Query: 184 IISKDKKEIQWKGLPRT 234
II++DKKEI+WKGLP T
Sbjct: 121 IIARDKKEIRWKGLPIT 137
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,020,298,988
Number of Sequences: 33410
Number of Extensions: 3020298988
Number of Successful Extensions: 161251876
Number of sequences better than 0.0: 0
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