BLASTX 7.6.2
Query= RU16947 /QuerySize=326
(325 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcri... 116 2e-027
TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription... 97 1e-021
TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SC... 93 2e-020
TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcri... 89 6e-019
TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription... 84 2e-017
TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription... 84 2e-017
TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription... 84 2e-017
TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription... 73 3e-014
TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-l... 49 5e-007
TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-L... 45 7e-006
>TAIR9_protein||AT2G37650.1 | Symbols: | scarecrow-like transcription factor 9
(SCL9) | chr2:15792623-15794779 FORWARD
Length = 719
Score = 116 bits (290), Expect = 2e-027
Identities = 53/69 (76%), Positives = 62/69 (89%)
Frame = +2
Query: 116 DESVAVDSARNRVLNLIRRTNPDIFIHGVINGAYNAPFFVTRFREALFHFSSMFDMLETV 295
DESV V+S R+ VLNLI + NPD+F+ G++NGAYNAPFFVTRFREALFHFSS+FDMLET+
Sbjct: 554 DESVKVESCRDTVLNLIGKINPDLFVFGIVNGAYNAPFFVTRFREALFHFSSIFDMLETI 613
Query: 296 VPREDRERM 322
VPRED ERM
Sbjct: 614 VPREDEERM 622
Score = 57 bits (136), Expect = 2e-009
Identities = 26/37 (70%), Positives = 29/37 (78%)
Frame = +1
Query: 1 FEYNAIAKKWENITLEELKIGRDEFLVVNCLYRGKNL 111
FEY AIAKKW+ I LE+L I RDE VVNCLYR +NL
Sbjct: 516 FEYKAIAKKWDAIQLEDLDIDRDEITVVNCLYRAENL 552
>TAIR9_protein||AT2G29060.1 | Symbols: | scarecrow transcription factor family
protein | chr2:12481991-12486941 FORWARD
Length = 1337
Score = 97 bits (241), Expect = 1e-021
Identities = 48/98 (48%), Positives = 68/98 (69%)
Frame = +2
Query: 32 KTLHLRN*KLEGMSFLL*TVCIGVRTCFDESVAVDSARNRVLNLIRRTNPDIFIHGVING 211
+++ L + KL+ F+ R DE+VAV S R+ VL LIR+ PD+FI G+++G
Sbjct: 504 ESIKLEDLKLKEGEFVAVNSLFRFRNLLDETVAVHSPRDTVLKLIRKIKPDVFIPGILSG 563
Query: 212 AYNAPFFVTRFREALFHFSSMFDMLETVVPREDRERMV 325
+YNAPFFVTRFRE LFH+SS+FDM +T + RED R++
Sbjct: 564 SYNAPFFVTRFREVLFHYSSLFDMCDTNLTREDPMRVM 601
Score = 88 bits (216), Expect = 9e-019
Identities = 37/104 (35%), Positives = 72/104 (69%), Gaps = 1/104 (0%)
Frame = +2
Query: 14 LLQRNGKTLHLRN*KLEGMSFLL*TVCIGVRTCFDESVAVDSA-RNRVLNLIRRTNPDIF 190
+ +N +T+ + + + L + ++ DE+ + ++ R+ VL LIR NPD+F
Sbjct: 1139 IASQNWETIRIEDLDIRPNEVLAVNAGLRLKNLQDETGSEENCPRDAVLKLIRNMNPDVF 1198
Query: 191 IHGVINGAYNAPFFVTRFREALFHFSSMFDMLETVVPREDRERM 322
IH ++NG++NAPFF++RF+EA++H+S++FDM ++ +PR+++ER+
Sbjct: 1199 IHAIVNGSFNAPFFISRFKEAVYHYSALFDMFDSTLPRDNKERI 1242
Score = 54 bits (127), Expect = 2e-008
Identities = 24/38 (63%), Positives = 31/38 (81%)
Frame = +1
Query: 1 FEYNAIAKKWENITLEELKIGRDEFLVVNCLYRGKNLL 114
FEYNAIA+KWE+I LE+LK+ EF+ VN L+R +NLL
Sbjct: 494 FEYNAIAQKWESIKLEDLKLKEGEFVAVNSLFRFRNLL 531
>TAIR9_protein||AT1G07530.1 | Symbols: SCL14, ATGRAS2, GRAS2 | SCL14
(SCARECROW-LIKE 14); transcription factor | chr1:2313828-2316137
REVERSE
Length = 770
Score = 93 bits (230), Expect = 2e-020
Identities = 44/98 (44%), Positives = 68/98 (69%)
Frame = +2
Query: 32 KTLHLRN*KLEGMSFLL*TVCIGVRTCFDESVAVDSARNRVLNLIRRTNPDIFIHGVING 211
+T+ + + KL +++ R DE+V V+S R+ VL LIR+ NP++FI +++G
Sbjct: 578 ETIQVEDLKLRQGEYVVVNSLFRFRNLLDETVLVNSPRDAVLKLIRKINPNVFIPAILSG 637
Query: 212 AYNAPFFVTRFREALFHFSSMFDMLETVVPREDRERMV 325
YNAPFFVTRFREALFH+S++FDM ++ + RED R++
Sbjct: 638 NYNAPFFVTRFREALFHYSAVFDMCDSKLAREDEMRLM 675
Score = 53 bits (125), Expect = 3e-008
Identities = 23/38 (60%), Positives = 32/38 (84%)
Frame = +1
Query: 1 FEYNAIAKKWENITLEELKIGRDEFLVVNCLYRGKNLL 114
FEYNAIA+KWE I +E+LK+ + E++VVN L+R +NLL
Sbjct: 568 FEYNAIAQKWETIQVEDLKLRQGEYVVVNSLFRFRNLL 605
>TAIR9_protein||AT5G59450.1 | Symbols: | scarecrow-like transcription factor 11
(SCL11) | chr5:23974808-23976640 FORWARD
Length = 611
Score = 89 bits (218), Expect = 6e-019
Identities = 39/65 (60%), Positives = 51/65 (78%)
Frame = +2
Query: 116 DESVAVDSARNRVLNLIRRTNPDIFIHGVINGAYNAPFFVTRFREALFHFSSMFDMLETV 295
DE+V++DS R+ VL L R NPD+F+ ING YN+PFF+TRFREALFH+SS+FDM +T
Sbjct: 437 DETVSLDSPRDTVLKLFRDINPDLFVFAEINGMYNSPFFMTRFREALFHYSSLFDMFDTT 496
Query: 296 VPRED 310
+ ED
Sbjct: 497 IHAED 501
Score = 47 bits (110), Expect = 2e-006
Identities = 21/33 (63%), Positives = 25/33 (75%)
Frame = +1
Query: 1 FEYNAIAKKWENITLEELKIGRDEFLVVNCLYR 99
FE+N IAKKWE ITL+EL I E VVNC++R
Sbjct: 399 FEFNFIAKKWETITLDELMINPGETTVVNCIHR 431
>TAIR9_protein||AT3G46600.1 | Symbols: | scarecrow transcription factor family
protein | chr3:17158048-17159799 FORWARD
Length = 584
Score = 84 bits (205), Expect = 2e-017
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +2
Query: 116 DESVAVDSARNRVLNLIRRTNPDIFIHGVINGAYNAPFFVTRFREALFHFSSMFDMLETV 295
DE+V+++S R+ L L R NPD+F+ ING YN+PFF+TRFREALFH SS+FDM ET
Sbjct: 420 DETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETT 479
Query: 296 VPREDRER 319
+ +D R
Sbjct: 480 LSEDDNCR 487
Score = 45 bits (104), Expect = 9e-006
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 1 FEYNAIAKKWENITLEELKIGRDEFLVVNCLYR 99
FEY+ IAK WENITL++L I E VVNC+ R
Sbjct: 382 FEYSFIAKNWENITLDDLVINSGETTVVNCILR 414
>TAIR9_protein||AT3G46600.2 | Symbols: | scarecrow transcription factor family
protein | chr3:17158379-17159799 FORWARD
Length = 454
Score = 84 bits (205), Expect = 2e-017
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +2
Query: 116 DESVAVDSARNRVLNLIRRTNPDIFIHGVINGAYNAPFFVTRFREALFHFSSMFDMLETV 295
DE+V+++S R+ L L R NPD+F+ ING YN+PFF+TRFREALFH SS+FDM ET
Sbjct: 290 DETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETT 349
Query: 296 VPREDRER 319
+ +D R
Sbjct: 350 LSEDDNCR 357
Score = 45 bits (104), Expect = 9e-006
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 1 FEYNAIAKKWENITLEELKIGRDEFLVVNCLYR 99
FEY+ IAK WENITL++L I E VVNC+ R
Sbjct: 252 FEYSFIAKNWENITLDDLVINSGETTVVNCILR 284
>TAIR9_protein||AT3G46600.3 | Symbols: | scarecrow transcription factor family
protein | chr3:17158052-17159799 FORWARD
Length = 552
Score = 84 bits (205), Expect = 2e-017
Identities = 38/68 (55%), Positives = 50/68 (73%)
Frame = +2
Query: 116 DESVAVDSARNRVLNLIRRTNPDIFIHGVINGAYNAPFFVTRFREALFHFSSMFDMLETV 295
DE+V+++S R+ L L R NPD+F+ ING YN+PFF+TRFREALFH SS+FDM ET
Sbjct: 388 DETVSLNSPRDTALKLFRDINPDLFVFAEINGTYNSPFFLTRFREALFHCSSLFDMYETT 447
Query: 296 VPREDRER 319
+ +D R
Sbjct: 448 LSEDDNCR 455
Score = 45 bits (104), Expect = 9e-006
Identities = 20/33 (60%), Positives = 24/33 (72%)
Frame = +1
Query: 1 FEYNAIAKKWENITLEELKIGRDEFLVVNCLYR 99
FEY+ IAK WENITL++L I E VVNC+ R
Sbjct: 350 FEYSFIAKNWENITLDDLVINSGETTVVNCILR 382
>TAIR9_protein||AT1G07520.1 | Symbols: | scarecrow transcription factor family
protein | chr1:2309718-2311805 REVERSE
Length = 696
Score = 73 bits (177), Expect = 3e-014
Identities = 30/63 (47%), Positives = 46/63 (73%)
Frame = +2
Query: 134 DSARNRVLNLIRRTNPDIFIHGVINGAYNAPFFVTRFREALFHFSSMFDMLETVVPREDR 313
D R+ L LIR NP++F+ +NG++NAPFF TRF+EALFH+S++FD+ + +E+
Sbjct: 539 DCPRDGFLKLIRDMNPNVFLSSTVNGSFNAPFFTTRFKEALFHYSALFDLFGATLSKENP 598
Query: 314 ERM 322
ER+
Sbjct: 599 ERI 601
>TAIR9_protein||AT4G17230.1 | Symbols: SCL13 | SCL13 (Scarecrow-like 13);
transcription factor | chr4:9661218-9662807 REVERSE
Length = 530
Score = 49 bits (115), Expect = 5e-007
Identities = 23/69 (33%), Positives = 45/69 (65%)
Frame = +2
Query: 116 DESVAVDSARNRVLNLIRRTNPDIFIHGVINGAYNAPFFVTRFREALFHFSSMFDMLETV 295
DESV+V++ R+R+L+LI+ +P + N F++RF E L ++++MF+ ++
Sbjct: 367 DESVSVENHRDRLLHLIKSLSPKLVTLVEQESNTNTSPFLSRFVETLDYYTAMFESIDAA 426
Query: 296 VPREDRERM 322
PR+D++R+
Sbjct: 427 RPRDDKQRI 435
>TAIR9_protein||AT2G04890.1 | Symbols: SCL21 | SCL21 (SCARECROW-LIKE 21);
transcription factor | chr2:1720575-1721816 REVERSE
Length = 414
Score = 45 bits (105), Expect = 7e-006
Identities = 20/69 (28%), Positives = 43/69 (62%)
Frame = +2
Query: 116 DESVAVDSARNRVLNLIRRTNPDIFIHGVINGAYNAPFFVTRFREALFHFSSMFDMLETV 295
DESV++++ R+R+L +++ +P + N F+ RF E L ++++MF+ ++ +
Sbjct: 255 DESVSMENHRDRLLRMVKSLSPKVVTLVEQECNTNTSPFLPRFLETLSYYTAMFESIDVM 314
Query: 296 VPREDRERM 322
+PR +ER+
Sbjct: 315 LPRNHKERI 323
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,020,298,988
Number of Sequences: 33410
Number of Extensions: 3020298988
Number of Successful Extensions: 161251876
Number of sequences better than 0.0: 0
|