BLASTX 7.6.2
Query= RU17029 /QuerySize=327
(326 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G48160.1 | Symbols: OBE2 | OBE2 (OBERON2); pro... 201 8e-053
TAIR9_protein||AT5G48160.2 | Symbols: OBE2 | OBE2 (OBERON2); pro... 201 8e-053
TAIR9_protein||AT3G07780.1 | Symbols: OBE1 | OBE1 (OBERON1); pro... 199 3e-052
TAIR9_protein||AT3G63500.1 | Symbols: | unknown protein | chr3:... 137 2e-033
TAIR9_protein||AT3G63500.2 | Symbols: | unknown protein | chr3:... 137 2e-033
TAIR9_protein||AT1G14740.1 | Symbols: | unknown protein | chr1:... 134 1e-032
TAIR9_protein||AT2G18880.1 | Symbols: VEL2 | VEL2 ((VERNALIZATIO... 49 4e-007
>TAIR9_protein||AT5G48160.1 | Symbols: OBE2 | OBE2 (OBERON2); protein binding /
zinc ion binding | chr5:19528019-19529820 REVERSE
Length = 575
Score = 201 bits (510), Expect = 8e-053
Identities = 85/109 (77%), Positives = 96/109 (88%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 SLSQTSLIEVFVYKRCRNIACQNQIPADDCTCEICTKRNGFCNLCMCVVCNKFDFEVNTC 181
SLSQ SLIE+FVYKRCRNIACQNQ+PADDC C+ICT R GFCNLCMC +CNKFDF VNTC
Sbjct: 183 SLSQPSLIEIFVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTC 242
Query: 182 RWVGCDLCSHWTHTDCAIRDGLICMGASVKSG-AGPTEMLFRCRACNRT 325
RW+GCDLCSHWTHTDCAIRDG I G+S K+ +GP E++F+CRACNRT
Sbjct: 243 RWIGCDLCSHWTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRT 291
>TAIR9_protein||AT5G48160.2 | Symbols: OBE2 | OBE2 (OBERON2); protein binding /
zinc ion binding | chr5:19528019-19529820 REVERSE
Length = 575
Score = 201 bits (510), Expect = 8e-053
Identities = 85/109 (77%), Positives = 96/109 (88%), Gaps = 1/109 (0%)
Frame = +2
Query: 2 SLSQTSLIEVFVYKRCRNIACQNQIPADDCTCEICTKRNGFCNLCMCVVCNKFDFEVNTC 181
SLSQ SLIE+FVYKRCRNIACQNQ+PADDC C+ICT R GFCNLCMC +CNKFDF VNTC
Sbjct: 183 SLSQPSLIEIFVYKRCRNIACQNQLPADDCYCDICTNRKGFCNLCMCTICNKFDFSVNTC 242
Query: 182 RWVGCDLCSHWTHTDCAIRDGLICMGASVKSG-AGPTEMLFRCRACNRT 325
RW+GCDLCSHWTHTDCAIRDG I G+S K+ +GP E++F+CRACNRT
Sbjct: 243 RWIGCDLCSHWTHTDCAIRDGQITTGSSAKNNTSGPGEIVFKCRACNRT 291
>TAIR9_protein||AT3G07780.1 | Symbols: OBE1 | OBE1 (OBERON1); protein binding /
zinc ion binding | chr3:2485104-2486876 FORWARD
Length = 567
Score = 199 bits (505), Expect = 3e-052
Identities = 84/108 (77%), Positives = 94/108 (87%)
Frame = +2
Query: 2 SLSQTSLIEVFVYKRCRNIACQNQIPADDCTCEICTKRNGFCNLCMCVVCNKFDFEVNTC 181
+LSQ+SLIE+FVYKRCRNIACQN++PAD C CEIC R GFCNLCMCV+CNKFDF VNTC
Sbjct: 182 NLSQSSLIEIFVYKRCRNIACQNELPADGCPCEICANRKGFCNLCMCVICNKFDFAVNTC 241
Query: 182 RWVGCDLCSHWTHTDCAIRDGLICMGASVKSGAGPTEMLFRCRACNRT 325
RW+GCD+CSHWTHTDCAIRDG I MG S KS +G EMLF+CRACN T
Sbjct: 242 RWIGCDVCSHWTHTDCAIRDGEISMGVSPKSVSGMGEMLFKCRACNHT 289
>TAIR9_protein||AT3G63500.1 | Symbols: | unknown protein |
chr3:23446331-23449166 REVERSE
Length = 888
Score = 137 bits (343), Expect = 2e-033
Identities = 51/106 (48%), Positives = 73/106 (68%)
Frame = +2
Query: 2 SLSQTSLIEVFVYKRCRNIACQNQIPADDCTCEICTKRNGFCNLCMCVVCNKFDFEVNTC 181
S+S + L E+F+ RC+N++C+ +P D+C C +C++++GFC+ CMC+VC+ FD NTC
Sbjct: 517 SISSSHLAEIFMNMRCKNLSCRVLLPVDECDCRVCSRKDGFCSACMCLVCSNFDMASNTC 576
Query: 182 RWVGCDLCSHWTHTDCAIRDGLICMGASVKSGAGPTEMLFRCRACN 319
WVGCD+C HW HTDC I++ I G + G TEM F C ACN
Sbjct: 577 SWVGCDVCLHWCHTDCGIKESYIRNGINASGAPGMTEMQFHCVACN 622
>TAIR9_protein||AT3G63500.2 | Symbols: | unknown protein |
chr3:23446331-23449991 REVERSE
Length = 1163
Score = 137 bits (343), Expect = 2e-033
Identities = 51/106 (48%), Positives = 73/106 (68%)
Frame = +2
Query: 2 SLSQTSLIEVFVYKRCRNIACQNQIPADDCTCEICTKRNGFCNLCMCVVCNKFDFEVNTC 181
S+S + L E+F+ RC+N++C+ +P D+C C +C++++GFC+ CMC+VC+ FD NTC
Sbjct: 792 SISSSHLAEIFMNMRCKNLSCRVLLPVDECDCRVCSRKDGFCSACMCLVCSNFDMASNTC 851
Query: 182 RWVGCDLCSHWTHTDCAIRDGLICMGASVKSGAGPTEMLFRCRACN 319
WVGCD+C HW HTDC I++ I G + G TEM F C ACN
Sbjct: 852 SWVGCDVCLHWCHTDCGIKESYIRNGINASGAPGMTEMQFHCVACN 897
>TAIR9_protein||AT1G14740.1 | Symbols: | unknown protein | chr1:5075450-5077732
REVERSE
Length = 734
Score = 134 bits (335), Expect = 1e-032
Identities = 52/104 (50%), Positives = 69/104 (66%)
Frame = +2
Query: 5 LSQTSLIEVFVYKRCRNIACQNQIPADDCTCEICTKRNGFCNLCMCVVCNKFDFEVNTCR 184
+ L+E+F++ RCRN+ C++ +P DDC C+IC+ GFC+ CMC VC +FD NTC
Sbjct: 394 IPMNELVEIFLFLRCRNVNCKSLLPVDDCECKICSNNKGFCSSCMCPVCLRFDSASNTCS 453
Query: 185 WVGCDLCSHWTHTDCAIRDGLICMGASVKSGAGPTEMLFRCRAC 316
WVGCD+CSHW H C I+ LI G S+K G TEM+F C C
Sbjct: 454 WVGCDVCSHWCHAACGIQKNLIKPGHSLKGQRGTTEMMFHCIGC 497
>TAIR9_protein||AT2G18880.1 | Symbols: VEL2 | VEL2 ((VERNALIZATION5/VIN3-LIKE))
| chr2:8176386-8178788 FORWARD
Length = 530
Score = 49 bits (116), Expect = 4e-007
Identities = 28/99 (28%), Positives = 45/99 (45%), Gaps = 16/99 (16%)
Frame = +2
Query: 47 CRNIACQNQIPADDCTCEICTKRNGFCNLCMCVVCNKFDFEVNTCRWVGCDLCSHWTHTD 226
C+N+ACQN++ ++ T FC C C +C K+D + W+ C+ S +
Sbjct: 119 CQNLACQNKL-REEAT---------FCKRCSCCICFKYDDNKDPSLWLTCNSDSQFDGES 168
Query: 227 CAIRDGLICMGASVKSG------AGPTEMLFRCRACNRT 325
C + L C S KSG + + F C +C +T
Sbjct: 169 CGLSCHLNCAFDSEKSGLKEDTPSSDIDGCFNCVSCGKT 207
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,020,298,988
Number of Sequences: 33410
Number of Extensions: 3020298988
Number of Successful Extensions: 161251876
Number of sequences better than 0.0: 0
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