BLASTX 7.6.2
Query= RU17037 /QuerySize=855
(854 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT5G22650.2 | Symbols: HD2B, HDT02, HDT2, ATHD2B,... 72 5e-013
TAIR9_protein||AT5G03740.1 | Symbols: HD2C, HDT3 | HD2C (HISTONE... 71 7e-013
TAIR9_protein||AT5G22650.1 | Symbols: HD2B, HDT02, HDT2, ATHD2B,... 67 1e-011
TAIR9_protein||AT3G44750.1 | Symbols: HD2A, ATHD2A, HDA3, HDT1 |... 50 2e-006
>TAIR9_protein||AT5G22650.2 | Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 |
HD2B (HISTONE DEACETYLASE 2B); histone deacetylase |
chr5:7534120-7536054 FORWARD
Length = 306
Score = 72 bits (174), Expect = 5e-013
Identities = 46/74 (62%), Positives = 51/74 (68%), Gaps = 10/74 (13%)
Frame = +2
Query: 296 TPKKPE--SKKRAQVSGSVKTPVSAKKAK---IVTSTPQKTDGKKGGHTDTPHPAKK-GK 457
TPKKPE +KKR S S KTPVS KKAK STPQKT+ KKGGHT TPHPAKK GK
Sbjct: 199 TPKKPEPINKKRPNESVS-KTPVSGKKAKPAAAPASTPQKTEKKKGGHTATPHPAKKGGK 257
Query: 458 TPATDKSKTQTPKS 499
+P + Q+PKS
Sbjct: 258 SPV---NANQSPKS 268
>TAIR9_protein||AT5G03740.1 | Symbols: HD2C, HDT3 | HD2C (HISTONE DEACETYLASE
2C); histone deacetylase/ nucleic acid binding / transcription
repressor/ zinc ion binding | chr5:981994-983961 FORWARD
Length = 295
Score = 71 bits (173), Expect = 7e-013
Identities = 52/107 (48%), Positives = 56/107 (52%), Gaps = 13/107 (12%)
Frame = +2
Query: 296 TPKKPES-KKRAQVSGSVKTPVSAKKAKIVTSTPQKTDGKKGG-HTDTPHPAKK------ 451
TPKKPE KKR+ S K P S KKAK V TPQKTD KK H TPHP+K+
Sbjct: 190 TPKKPEEPKKRSAEPNSSKNPASNKKAKFV--TPQKTDSKKPHVHVATPHPSKQAGKNSG 247
Query: 452 -GKTPATDKSKTQTPKSAXXXXXXXXXXXXXXXXXALQSHNKAKHSA 589
G T T K + QTPKSA LQSH KAKHSA
Sbjct: 248 GGSTGETSKQQ-QTPKSA-GAFGCKSCTRTFTSEMGLQSHTKAKHSA 292
>TAIR9_protein||AT5G22650.1 | Symbols: HD2B, HDT02, HDT2, ATHD2B, HDA4, HD2 |
HD2B (HISTONE DEACETYLASE 2B); histone deacetylase |
chr5:7534120-7536054 FORWARD
Length = 307
Score = 67 bits (162), Expect = 1e-011
Identities = 46/75 (61%), Positives = 51/75 (68%), Gaps = 11/75 (14%)
Frame = +2
Query: 296 TPKKPE--SKKRAQVSGSVKTPVSAKKAK---IVTSTPQKT-DGKKGGHTDTPHPAKK-G 454
TPKKPE +KKR S S KTPVS KKAK STPQKT + KKGGHT TPHPAKK G
Sbjct: 199 TPKKPEPINKKRPNESVS-KTPVSGKKAKPAAAPASTPQKTEEKKKGGHTATPHPAKKGG 257
Query: 455 KTPATDKSKTQTPKS 499
K+P + Q+PKS
Sbjct: 258 KSPV---NANQSPKS 269
>TAIR9_protein||AT3G44750.1 | Symbols: HD2A, ATHD2A, HDA3, HDT1 | HDA3 (HISTONE
DEACETYLASE 3); histone deacetylase/ nucleic acid binding / zinc ion
binding | chr3:16298045-16299585 FORWARD
Length = 246
Score = 50 bits (118), Expect = 2e-006
Identities = 30/65 (46%), Positives = 34/65 (52%), Gaps = 2/65 (3%)
Frame = +2
Query: 293 PTPKKPESKKRAQVSGSVKTPVSAKKAKIVTSTPQKTD-GKKGGHTDTPHPAKKGKTPAT 469
PTPKKP S K+ + K PVSAKKAK+ TPQKTD KKGG P +
Sbjct: 163 PTPKKPASSKKRANETTPKAPVSAKKAKVAV-TPQKTDEKKKGGKAANQSPKSASQVSCG 221
Query: 470 DKSKT 484
KT
Sbjct: 222 SCKKT 226
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,020,298,988
Number of Sequences: 33410
Number of Extensions: 3020298988
Number of Successful Extensions: 161251876
Number of sequences better than 0.0: 0
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