BLASTX 7.6.2
Query= RU17075 /QuerySize=742
(741 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G14410.1 | Symbols: ATWHY1, PTAC1, WHY1 | WHY1... 264 6e-071
TAIR9_protein||AT2G02740.2 | Symbols: ATWHY3, PTAC11, WHY3 | WHY... 258 2e-069
TAIR9_protein||AT2G02740.1 | Symbols: ATWHY3, PTAC11, WHY3 | WHY... 255 2e-068
TAIR9_protein||AT1G71260.1 | Symbols: ATWHY2 | ATWHY2 (A. THALIA... 158 4e-039
>TAIR9_protein||AT1G14410.1 | Symbols: ATWHY1, PTAC1, WHY1 | WHY1 (WHIRLY 1);
DNA binding / telomeric DNA binding | chr1:4929352-4930810 REVERSE
Length = 264
Score = 264 bits (673), Expect = 6e-071
Identities = 136/223 (60%), Positives = 161/223 (72%), Gaps = 4/223 (1%)
Frame = +3
Query: 42 LSSPVAVQNPNHSLPSKARVFSTNSFGFAPNSTSFGKRRLALKCRQSEYFEQQRLXXXXX 221
LS+P+ N N S + V T F + + +K + + R
Sbjct: 5 LSTPLMAVNSNPRFLSSSSVLVTGGFAVKRHGFALKPTTKTVKL----FSVKSRQTDYFE 60
Query: 222 XXXXXXXXXXXXXXXXVPARFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFVL 401
+PARFYVGHSIYKGKAALTV+P+APEF ALDSGAFK+S++GF+L
Sbjct: 61 KQRFGDSSSSPSPAEGLPARFYVGHSIYKGKAALTVDPRAPEFVALDSGAFKLSKDGFLL 120
Query: 402 LQFAPAAGVRVYDWSRKQVFSLSVTEIGSIVSLGARESCEFFHDPFKGKSEEGKVRKVLK 581
LQFAP+AGVR YDWS+KQVFSLSVTEIG++VSLG RESCEFFHDPFKGKS+EGKVRKVLK
Sbjct: 121 LQFAPSAGVRQYDWSKKQVFSLSVTEIGTLVSLGPRESCEFFHDPFKGKSDEGKVRKVLK 180
Query: 582 VEPLPDGSGRFFNLSVQNKLINLEENIYIPVTRAEFAVLNSAF 710
VEPLPDGSG FFNLSVQNKL+N++E+IYIP+TRAEFAVL SAF
Sbjct: 181 VEPLPDGSGHFFNLSVQNKLVNVDESIYIPITRAEFAVLISAF 223
>TAIR9_protein||AT2G02740.2 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3);
DNA binding | chr2:769389-770993 FORWARD
Length = 268
Score = 258 bits (659), Expect = 2e-069
Identities = 122/144 (84%), Positives = 139/144 (96%)
Frame = +3
Query: 279 RFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFVLLQFAPAAGVRVYDWSRKQV 458
RFYVGHSIYKGKAALT+EP+APEF AL+SGAFK+++EGF+LLQFAPAAGVR YDWSRKQV
Sbjct: 84 RFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQV 143
Query: 459 FSLSVTEIGSIVSLGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGRFFNLSVQNK 638
FSLSVTEIG++VSLG RESCEFFHDPFKGK +EGKVRKVLKVEPLPDGSGRFFNLSVQNK
Sbjct: 144 FSLSVTEIGNLVSLGPRESCEFFHDPFKGKGDEGKVRKVLKVEPLPDGSGRFFNLSVQNK 203
Query: 639 LINLEENIYIPVTRAEFAVLNSAF 710
L+N++E++YIP+T+AEFAVL SAF
Sbjct: 204 LLNVDESVYIPITKAEFAVLISAF 227
>TAIR9_protein||AT2G02740.1 | Symbols: ATWHY3, PTAC11, WHY3 | WHY3 (WHIRLY 3);
DNA binding | chr2:769389-770993 FORWARD
Length = 269
Score = 255 bits (651), Expect = 2e-068
Identities = 123/145 (84%), Positives = 140/145 (96%), Gaps = 1/145 (0%)
Frame = +3
Query: 279 RFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFVLLQFAPAAGVRVYDWSRKQV 458
RFYVGHSIYKGKAALT+EP+APEF AL+SGAFK+++EGF+LLQFAPAAGVR YDWSRKQV
Sbjct: 84 RFYVGHSIYKGKAALTIEPRAPEFVALESGAFKLTKEGFLLLQFAPAAGVRQYDWSRKQV 143
Query: 459 FSLSVTEIGSIVSLGARESCEFFHDPFKGK-SEEGKVRKVLKVEPLPDGSGRFFNLSVQN 635
FSLSVTEIG++VSLG RESCEFFHDPFKGK S+EGKVRKVLKVEPLPDGSGRFFNLSVQN
Sbjct: 144 FSLSVTEIGNLVSLGPRESCEFFHDPFKGKGSDEGKVRKVLKVEPLPDGSGRFFNLSVQN 203
Query: 636 KLINLEENIYIPVTRAEFAVLNSAF 710
KL+N++E++YIP+T+AEFAVL SAF
Sbjct: 204 KLLNVDESVYIPITKAEFAVLISAF 228
>TAIR9_protein||AT1G71260.1 | Symbols: ATWHY2 | ATWHY2 (A. THALIANA WHIRLY 2);
DNA binding | chr1:26861849-26863391 REVERSE
Length = 239
Score = 158 bits (398), Expect = 4e-039
Identities = 73/144 (50%), Positives = 102/144 (70%)
Frame = +3
Query: 279 RFYVGHSIYKGKAALTVEPKAPEFTALDSGAFKMSREGFVLLQFAPAAGVRVYDWSRKQV 458
R + +SI+KGKAAL+VEP P FT +DSG ++ R G +++ F PA G R YDW +KQ
Sbjct: 53 RLFAPYSIFKGKAALSVEPVLPSFTEIDSGNLRIDRRGSLMMTFMPAIGERKYDWEKKQK 112
Query: 459 FSLSVTEIGSIVSLGARESCEFFHDPFKGKSEEGKVRKVLKVEPLPDGSGRFFNLSVQNK 638
F+LS TE+GS++S+G+++S EFFHDP S G+VRK L V+P DGSG F +LSV N
Sbjct: 113 FALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSVNNS 172
Query: 639 LINLEENIYIPVTRAEFAVLNSAF 710
++ + +PVT+AEFAV+ +AF
Sbjct: 173 ILKTNDYFVVPVTKAEFAVMKTAF 196
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,020,298,988
Number of Sequences: 33410
Number of Extensions: 3020298988
Number of Successful Extensions: 161251876
Number of sequences better than 0.0: 0
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