BLASTX 7.6.2
Query= RU17395 /QuerySize=453
(452 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G70940.1 | Symbols: PIN3, ATPIN3 | PIN3 (PIN-F... 116 8e-027
TAIR9_protein||AT1G23080.1 | Symbols: PIN7, ATPIN7 | PIN7 (PIN-F... 80 6e-016
TAIR9_protein||AT1G23080.2 | Symbols: PIN7 | PIN7 (PIN-FORMED 7)... 71 2e-013
TAIR9_protein||AT1G23080.3 | Symbols: PIN7 | PIN7 (PIN-FORMED 7)... 71 2e-013
TAIR9_protein||AT2G01420.2 | Symbols: PIN4 | PIN4 (PIN-FORMED 4)... 68 2e-012
TAIR9_protein||AT2G01420.1 | Symbols: PIN4, ATPIN4 | PIN4 (PIN-F... 67 4e-012
>TAIR9_protein||AT1G70940.1 | Symbols: PIN3, ATPIN3 | PIN3 (PIN-FORMED 3);
auxin:hydrogen symporter/ transporter | chr1:26743170-26745871 FORWARD
Length = 641
Score = 116 bits (289), Expect = 8e-027
Identities = 68/121 (56%), Positives = 80/121 (66%), Gaps = 9/121 (7%)
Frame = +1
Query: 46 PTVAKAN-HDAKELHMFVWSSSNSPVSEGGGLHVFGG-PDFAASEQSGRSDQGAKEISML 219
PT K+N HDAKELHMFVWSS+ SPVS+ GL+VFGG PD ++Q GRSDQGAKEI ML
Sbjct: 343 PTGGKSNSHDAKELHMFVWSSNGSPVSDRAGLNVFGGAPD---NDQGGRSDQGAKEIRML 399
Query: 220 VADHPQNGETKVAVAESDGDHYHHGGEAFTFTGKADQGEEEREKEGPTGLNKQGSSSTAE 399
V D NGETK + GD G + F+F GK + E ER K+ GLNK +STA
Sbjct: 400 VPDQSHNGETKAVAHPASGD--FGGEQQFSFAGKEE--EAERPKDAENGLNKLAPNSTAA 455
Query: 400 L 402
L
Sbjct: 456 L 456
>TAIR9_protein||AT1G23080.1 | Symbols: PIN7, ATPIN7 | PIN7 (PIN-FORMED 7); auxin
efflux transmembrane transporter/ auxin:hydrogen symporter/ transporter
| chr1:8180768-8183406 REVERSE
Length = 620
Score = 80 bits (195), Expect = 6e-016
Identities = 47/85 (55%), Positives = 56/85 (65%), Gaps = 11/85 (12%)
Frame = +1
Query: 52 VAKAN-HDAKELHMFVWSSSNSPVSEGGGLHVFGGPDFAASEQSGRSDQ-GAKEISMLVA 225
V K+N +DAKELHMFVW S+ SPVS+ GL V D A+EQ G+SDQ GAKEI ML++
Sbjct: 336 VGKSNSNDAKELHMFVWGSNGSPVSDRAGLQV----DNGANEQVGKSDQGGAKEIRMLIS 391
Query: 226 DHPQNGETKVAVAESDGDHYHHGGE 300
DH QNGE K D +GGE
Sbjct: 392 DHTQNGENKAGPMNGD-----YGGE 411
>TAIR9_protein||AT1G23080.2 | Symbols: PIN7 | PIN7 (PIN-FORMED 7); auxin efflux
transmembrane transporter/ auxin:hydrogen symporter/ transporter |
chr1:8181644-8183406 REVERSE
Length = 528
Score = 71 bits (173), Expect = 2e-013
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 6/65 (9%)
Frame = +1
Query: 52 VAKAN-HDAKELHMFVWSSSNSPVSEGGGLHVFGGPDFAASEQSGRSDQ-GAKEISMLVA 225
V K+N +DAKELHMFVW S+ SPVS+ GL V D A+EQ G+SDQ GAKEI ML++
Sbjct: 336 VGKSNSNDAKELHMFVWGSNGSPVSDRAGLQV----DNGANEQVGKSDQGGAKEIRMLIS 391
Query: 226 DHPQN 240
DH QN
Sbjct: 392 DHTQN 396
>TAIR9_protein||AT1G23080.3 | Symbols: PIN7 | PIN7 (PIN-FORMED 7); auxin efflux
transmembrane transporter/ auxin:hydrogen symporter/ transporter |
chr1:8180768-8183406 REVERSE
Length = 616
Score = 71 bits (173), Expect = 2e-013
Identities = 40/65 (61%), Positives = 48/65 (73%), Gaps = 6/65 (9%)
Frame = +1
Query: 52 VAKAN-HDAKELHMFVWSSSNSPVSEGGGLHVFGGPDFAASEQSGRSDQ-GAKEISMLVA 225
V K+N +DAKELHMFVW S+ SPVS+ GL V D A+EQ G+SDQ GAKEI ML++
Sbjct: 336 VGKSNSNDAKELHMFVWGSNGSPVSDRAGLQV----DNGANEQVGKSDQGGAKEIRMLIS 391
Query: 226 DHPQN 240
DH QN
Sbjct: 392 DHTQN 396
>TAIR9_protein||AT2G01420.2 | Symbols: PIN4 | PIN4 (PIN-FORMED 4);
auxin:hydrogen symporter/ transporter | chr2:180478-183199 REVERSE
Length = 617
Score = 68 bits (164), Expect = 2e-012
Identities = 39/68 (57%), Positives = 48/68 (70%), Gaps = 10/68 (14%)
Frame = +1
Query: 55 AKANHDAKELHMFVWSSSNSPVSEGGGLHVFGG--PDFAASEQSGRSDQGAKEISMLVAD 228
+KA+HDAKELHMFVWSSS SPVS+ VFGG D A+EQ S+QGAKEI M+V+D
Sbjct: 339 SKASHDAKELHMFVWSSSASPVSD-----VFGGGAGDNVATEQ---SEQGAKEIRMVVSD 390
Query: 229 HPQNGETK 252
P+ +
Sbjct: 391 QPRKSNAR 398
>TAIR9_protein||AT2G01420.1 | Symbols: PIN4, ATPIN4 | PIN4 (PIN-FORMED 4);
auxin:hydrogen symporter/ transporter | chr2:180478-183199 REVERSE
Length = 613
Score = 67 bits (162), Expect = 4e-012
Identities = 39/63 (61%), Positives = 47/63 (74%), Gaps = 10/63 (15%)
Frame = +1
Query: 55 AKANHDAKELHMFVWSSSNSPVSEGGGLHVFGG--PDFAASEQSGRSDQGAKEISMLVAD 228
+KA+HDAKELHMFVWSSS SPVS+ VFGG D A+EQ S+QGAKEI M+V+D
Sbjct: 339 SKASHDAKELHMFVWSSSASPVSD-----VFGGGAGDNVATEQ---SEQGAKEIRMVVSD 390
Query: 229 HPQ 237
P+
Sbjct: 391 QPR 393
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,082,082,001
Number of Sequences: 33410
Number of Extensions: 3082082001
Number of Successful Extensions: 166265883
Number of sequences better than 0.0: 0
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