BLASTX 7.6.2
Query= RU17484 /QuerySize=242
(241 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT4G39235.1 | Symbols: | unknown protein | chr4:... 76 3e-015
TAIR9_protein||AT3G05570.1 | Symbols: | unknown protein | chr3:... 71 1e-013
TAIR9_protein||AT2G21640.1 | Symbols: | Encodes a protein of un... 67 2e-012
>TAIR9_protein||AT4G39235.1 | Symbols: | unknown protein |
chr4:18268514-18269034 FORWARD
Length = 87
Score = 76 bits (186), Expect = 3e-015
Identities = 34/43 (79%), Positives = 37/43 (86%)
Frame = +3
Query: 105 SCRKKKNEQATFLEDVKDHIDEFIHASMDEHVSCFKKTIDKMF 233
SCRKK + ATF EDVKDHID+FIHASMDEH SCF+KTI KMF
Sbjct: 15 SCRKKVKDDATFFEDVKDHIDDFIHASMDEHKSCFQKTIKKMF 57
>TAIR9_protein||AT3G05570.1 | Symbols: | unknown protein | chr3:1616265-1616636
REVERSE
Length = 91
Score = 71 bits (172), Expect = 1e-013
Identities = 31/43 (72%), Positives = 36/43 (83%)
Frame = +3
Query: 105 SCRKKKNEQATFLEDVKDHIDEFIHASMDEHVSCFKKTIDKMF 233
SCRKK + A FLEDVKDHID+FI+ASMD+H +CF KTI KMF
Sbjct: 18 SCRKKTKDDANFLEDVKDHIDDFINASMDDHKNCFNKTIKKMF 60
>TAIR9_protein||AT2G21640.1 | Symbols: | Encodes a protein of unknown function
that is a marker for oxidative stress response. | chr2:9254985-9255453
FORWARD
Length = 105
Score = 67 bits (161), Expect = 2e-012
Identities = 29/44 (65%), Positives = 38/44 (86%), Gaps = 1/44 (2%)
Frame = +3
Query: 105 SCRKK-KNEQATFLEDVKDHIDEFIHASMDEHVSCFKKTIDKMF 233
SCRK+ K++ ATF ++KDH+DEFIHASMDEH +CFK T+DK+F
Sbjct: 29 SCRKRVKDDNATFFANLKDHMDEFIHASMDEHKTCFKNTMDKIF 72
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,082,082,001
Number of Sequences: 33410
Number of Extensions: 3082082001
Number of Successful Extensions: 166265883
Number of sequences better than 0.0: 0
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