BLASTX 7.6.2
Query= RU17714 /QuerySize=387
(386 letters)
Database: TAIR9 protein;
33,410 sequences; 13,468,323 total letters
Score E
Sequences producing significant alignments: (bits) Value
TAIR9_protein||AT1G18540.1 | Symbols: | 60S ribosomal protein L... 77 4e-015
TAIR9_protein||AT1G74050.1 | Symbols: | 60S ribosomal protein L... 73 4e-014
TAIR9_protein||AT1G74060.1 | Symbols: | 60S ribosomal protein L... 73 4e-014
>TAIR9_protein||AT1G18540.1 | Symbols: | 60S ribosomal protein L6 (RPL6A) |
chr1:6377448-6378548 REVERSE
Length = 234
Score = 77 bits (187), Expect = 4e-015
Identities = 40/78 (51%), Positives = 46/78 (58%)
Frame = -3
Query: 345 SGVNVEKFDDKYXXXXXXXXXXXXXXXXXXXXXXXXXXXPQERKDDQKSVDASLIKSIDA 166
SGVN EKFDDKY PQE+K+DQK+VDA+LIKSI+A
Sbjct: 149 SGVNTEKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQEKKEDQKTVDAALIKSIEA 208
Query: 165 VPDLKTYLAARFSLMSGM 112
VP+LK YL ARFSL GM
Sbjct: 209 VPELKVYLGARFSLSQGM 226
>TAIR9_protein||AT1G74050.1 | Symbols: | 60S ribosomal protein L6 (RPL6C) |
chr1:27847256-27848680 REVERSE
Length = 234
Score = 73 bits (178), Expect = 4e-014
Identities = 38/78 (48%), Positives = 46/78 (58%)
Frame = -3
Query: 345 SGVNVEKFDDKYXXXXXXXXXXXXXXXXXXXXXXXXXXXPQERKDDQKSVDASLIKSIDA 166
SGV ++KFDDKY PQ +KDDQK+VDA+LIK+I+A
Sbjct: 149 SGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQVKKDDQKAVDAALIKAIEA 208
Query: 165 VPDLKTYLAARFSLMSGM 112
VP+LKTYL ARFSL GM
Sbjct: 209 VPELKTYLGARFSLKQGM 226
>TAIR9_protein||AT1G74060.1 | Symbols: | 60S ribosomal protein L6 (RPL6B) |
chr1:27850033-27851299 REVERSE
Length = 234
Score = 73 bits (178), Expect = 4e-014
Identities = 38/78 (48%), Positives = 46/78 (58%)
Frame = -3
Query: 345 SGVNVEKFDDKYXXXXXXXXXXXXXXXXXXXXXXXXXXXPQERKDDQKSVDASLIKSIDA 166
SGV ++KFDDKY PQ +KDDQK+VDA+LIK+I+A
Sbjct: 149 SGVTLDKFDDKYFGKVAEKKKKKTEGEFFEAEKEEKKEIPQGKKDDQKAVDAALIKAIEA 208
Query: 165 VPDLKTYLAARFSLMSGM 112
VP+LKTYL ARFSL GM
Sbjct: 209 VPELKTYLGARFSLKQGM 226
Database: TAIR9 protein
Posted date: Wed Jul 08 15:16:08 2009
Number of letters in database: 13,468,323
Number of sequences in database: 33,410
Lambda K H
0.267 0.041 0.140
Gapped
Lambda K H
0.267 0.041 0.140
Matrix: blosum62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,143,694,496
Number of Sequences: 33410
Number of Extensions: 3143694496
Number of Successful Extensions: 171315246
Number of sequences better than 0.0: 0
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